Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30135
         (827 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81517-5|CAB04212.1|  685|Caenorhabditis elegans Hypothetical pr...    31   1.0  
U00031-6|AAP68961.1|  627|Caenorhabditis elegans Hypothetical pr...    31   1.0  
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr...    30   2.3  
Z75530-8|CAA99792.2|  405|Caenorhabditis elegans Hypothetical pr...    30   2.3  
U97015-9|AAB52349.1|  343|Caenorhabditis elegans Hypothetical pr...    29   3.1  
AC006717-1|AAY55883.2|  101|Caenorhabditis elegans Hypothetical ...    29   3.1  
Z81504-4|CAB04118.1|  314|Caenorhabditis elegans Hypothetical pr...    29   5.4  
Z81536-11|CAB04363.2|  295|Caenorhabditis elegans Hypothetical p...    28   9.4  
Z79596-6|CAJ43438.1|  225|Caenorhabditis elegans Hypothetical pr...    28   9.4  
Z79596-5|CAB01858.3|  369|Caenorhabditis elegans Hypothetical pr...    28   9.4  
AC006631-5|AAF39790.3|  469|Caenorhabditis elegans Acetylcholine...    28   9.4  

>Z81517-5|CAB04212.1|  685|Caenorhabditis elegans Hypothetical
           protein F28B1.5 protein.
          Length = 685

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
 Frame = +2

Query: 209 TMTLSLREFAEPT*TIGEYSRI-LDTRSVLCDYWTGSNIRNASFPIVYRVPYSAHHRLRC 385
           T  LS R+F EP  ++ EY  + +D      D +    IRN   PI++R   +   +   
Sbjct: 454 TRYLSHRQFFEPEFSVNEYCEVMIDISQSKVDNFFLLFIRNPETPIIFRRFNAGTPKTEQ 513

Query: 386 YPITSAFKSYSF-RHTLHHNAV 448
            P+T    +  F +   HH  V
Sbjct: 514 IPLTDLICAQDFDKFYWHHREV 535


>U00031-6|AAP68961.1|  627|Caenorhabditis elegans Hypothetical
           protein B0361.3 protein.
          Length = 627

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 37/139 (26%), Positives = 58/139 (41%), Gaps = 2/139 (1%)
 Frame = +2

Query: 176 MRKCSEEERSSTMTLSLREFAEPT*TIGEYSRILDTRSVLCDYWTGSNIRNASFPIVYRV 355
           MR C  E+ +ST  + L E+ E     G+ S I++      +   G  ++NA   +  RV
Sbjct: 403 MRLCRMED-NSTPKVKLEEYLERIALAGQLSTIVEEYKDQTEIKNGLELKNAKKWMNERV 461

Query: 356 PYS--AHHRLRCYPITSAFKSYSFRHTLHHNAVHGYPSNPVLPHSTVKTFSENLTVNFLH 529
             +  A HR     +T    ++    T   +A     + P  P   V T ++NL    LH
Sbjct: 462 KDAIRASHRF----VTDKMPNHG-SETYKESADMAKSALPT-PQDFVVTATQNL----LH 511

Query: 530 LFIVWVLCILNSNTPYGLL 586
           L   W   + N NT   L+
Sbjct: 512 LLRFWEEALANENTKVALI 530


>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical
           protein W01F3.3 protein.
          Length = 2175

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 18/89 (20%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
 Frame = +2

Query: 413 YSFRHTLHHNAVHGYPSNPVLPHSTVKTFSENLTVNFLHLFIVWVLCILNSNTPYGLLTV 592
           Y ++       +   P+N  +P ST + + + +    +     +V   LN   P    T+
Sbjct: 72  YRYKEECEDACISNAPANLGVPKSTTEDYQKEILSKEVKRVEFYVTSTLNYGAPVDTTTI 131

Query: 593 RTCFPM---CLESQPTTGYRMYLYQHNVT 670
           R  +P+     E+Q    +    YQ++ T
Sbjct: 132 RNVYPLPVTTTETQAPPHHTTKPYQYHYT 160


>Z75530-8|CAA99792.2|  405|Caenorhabditis elegans Hypothetical
           protein C47E8.3 protein.
          Length = 405

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = +3

Query: 321 FATLLFRLFTVFRILHTIVYAVIPLPQPSRAIAFGIPYIIMLYMGIQVI 467
           FATL+     +F   +TIV+   P  + S    FG+  +I + MGI  I
Sbjct: 32  FATLIAVTSIIFNTFYTIVFIRNPSLRRSGLFYFGVIAVIDIIMGINYI 80


>U97015-9|AAB52349.1|  343|Caenorhabditis elegans Hypothetical
           protein F48C1.8 protein.
          Length = 343

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +1

Query: 235 RRAHLNDWRIFPHFGYSERFM*LLDRQQHSQRFFSDCLP 351
           RR + N +  +P++GY+ R    +D      RF+ DC P
Sbjct: 113 RRGYNNGYYGYPNYGYTCRVSQFVDYVGRVPRFYCDCPP 151


>AC006717-1|AAY55883.2|  101|Caenorhabditis elegans Hypothetical
           protein Y14H12A.2 protein.
          Length = 101

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = +1

Query: 325 QRFFSD-CLPCSVFCTPSFTLLSHYLS 402
           Q +FSD C  C+V+C PS  L+ +Y +
Sbjct: 64  QTWFSDNCWSCTVYCIPSNRLIHYYFN 90


>Z81504-4|CAB04118.1|  314|Caenorhabditis elegans Hypothetical
           protein F15H9.4 protein.
          Length = 314

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 26/96 (27%), Positives = 36/96 (37%), Gaps = 3/96 (3%)
 Frame = +2

Query: 386 YPITSAFKSYSFRHTLHHNAVHGYPSNPVLPHSTVKTFSENLTVNFLHLF-IVWVLCILN 562
           + + S    + +RH    N   GY S         K + E L +   HLF      C+  
Sbjct: 103 FEVPSTLLCFIYRHNATKNINRGYSS---------KLYLEKLFLILTHLFPFSSAFCMFQ 153

Query: 563 SN-TPYGLLT-VRTCFPMCLESQPTTGYRMYLYQHN 664
           S  TP   +  V   FP CLE      + +Y Y  N
Sbjct: 154 SKLTPQQRMDYVNNNFPQCLEWLKFEAFEVYDYHPN 189


>Z81536-11|CAB04363.2|  295|Caenorhabditis elegans Hypothetical
           protein F40D4.7 protein.
          Length = 295

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 13/49 (26%), Positives = 22/49 (44%)
 Frame = +2

Query: 467 PVLPHSTVKTFSENLTVNFLHLFIVWVLCILNSNTPYGLLTVRTCFPMC 613
           P++P++ + T    L       FI++V+C    N PY  + V      C
Sbjct: 123 PMIPNNVILTLI--LFYGLFEYFILYVICNYQLNVPYNCVNVGCAMNSC 169


>Z79596-6|CAJ43438.1|  225|Caenorhabditis elegans Hypothetical
           protein C02C6.3b protein.
          Length = 225

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = +2

Query: 431 LHHNAVHGYPSNPVLPHSTVKTFSENLTVNFLHLFIVWVLCILNSNT 571
           L +N +H  P     P  ++ T   +L  NFL  FIV   CI   NT
Sbjct: 69  LSYNFIHNVPFEIACPFPSLHTL--DLRQNFLKNFIVNETCIKEVNT 113


>Z79596-5|CAB01858.3|  369|Caenorhabditis elegans Hypothetical
           protein C02C6.3a protein.
          Length = 369

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = +2

Query: 431 LHHNAVHGYPSNPVLPHSTVKTFSENLTVNFLHLFIVWVLCILNSNT 571
           L +N +H  P     P  ++ T   +L  NFL  FIV   CI   NT
Sbjct: 213 LSYNFIHNVPFEIACPFPSLHTL--DLRQNFLKNFIVNETCIKEVNT 257


>AC006631-5|AAF39790.3|  469|Caenorhabditis elegans Acetylcholine
           receptor protein 21 protein.
          Length = 469

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +2

Query: 419 FRHTLHHNAVHGYPSNPVLPHSTVKTFSENLTV 517
           F   +HH  VHGYP  P L     +  S+ L V
Sbjct: 290 FTVNIHHTGVHGYPVPPFLQIFAFRYLSKILFV 322


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,364,355
Number of Sequences: 27780
Number of extensions: 425182
Number of successful extensions: 1106
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1106
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)