Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30134X
         (536 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   2.6  
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    22   3.5  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    22   3.5  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   4.6  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   4.6  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   4.6  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   8.0  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +2

Query: 362 SAHHRLRCYPITSAFKSYSFRHTLHHNAVHGYPSNPVLPH 481
           SA H    YP T+ F   S+    HH + + +P     PH
Sbjct: 297 SACHSPGVYPSTAGFLPPSYHPHQHHPSQY-HPHRGSSPH 335


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 443 AVHGYPSNPVLPHSTVKTFSENLT 514
           ++ GYP NP L  +  K   E ++
Sbjct: 113 SLEGYPFNPCLTEAQYKEMEEKVS 136


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 443 AVHGYPSNPVLPHSTVKTFSENLT 514
           ++ GYP NP L  +  K   E ++
Sbjct: 129 SLEGYPFNPCLTEAQYKEMEEKVS 152


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +1

Query: 250 NDWRIFPHFGYSERFM*VLDRQQHS*RFFSDCLP 351
           N W +  +  +   F+ V+  Q  S R F+ C+P
Sbjct: 6   NIWTLAVNVLFVNSFLFVIAAQDSSGRIFTICVP 39


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +1

Query: 250 NDWRIFPHFGYSERFM*VLDRQQHS*RFFSDCLP 351
           N W +  +  +   F+ V+  Q  S R F+ C+P
Sbjct: 6   NIWTLAVNVLFVNSFLFVIAAQDSSGRIFTICVP 39


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +1

Query: 250 NDWRIFPHFGYSERFM*VLDRQQHS*RFFSDCLP 351
           N W +  +  +   F+ V+  Q  S R F+ C+P
Sbjct: 6   NIWTLAVNVLFVNSFLFVIAAQDSSGRIFTICVP 39


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -2

Query: 352 TVNNRKRSVTNVAAGPVLT*NAPSIQNAGIFSNRSSGLGE 233
           +VN R       AA  +L  NAP ++N   ++  S  LGE
Sbjct: 388 SVNPRYYGSLQAAARKLLG-NAPEVENIWDYTPSSLELGE 426


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,153
Number of Sequences: 438
Number of extensions: 3129
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15213684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)