Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30132
         (735 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC101552-1|AAI01553.1|  275|Homo sapiens hypothetical protein LO...    30   7.5  
BC101550-1|AAI01551.1|  275|Homo sapiens family with sequence si...    30   7.5  
AK125682-1|BAC86245.1|  275|Homo sapiens protein ( Homo sapiens ...    30   7.5  
AK123232-1|BAC85565.1|  275|Homo sapiens protein ( Homo sapiens ...    30   7.5  

>BC101552-1|AAI01553.1|  275|Homo sapiens hypothetical protein
           LOC285386 protein.
          Length = 275

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
 Frame = +1

Query: 547 RNIISIKWSFIETFSVDFWRIPRSYVQRLC---FIFPHLCTFTDTKQLINHRYYTFTPEE 717
           + ++  K+ FI    V   RIP S V R+C   F FP +    D +Q    R Y  +PEE
Sbjct: 118 KTLLICKYDFIMLSCVQLQRIPLSAVYRICLGKFTFPGMS--LDKRQGEGLRIYWGSPEE 175


>BC101550-1|AAI01551.1|  275|Homo sapiens family with sequence
           similarity 79, member B protein.
          Length = 275

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
 Frame = +1

Query: 547 RNIISIKWSFIETFSVDFWRIPRSYVQRLC---FIFPHLCTFTDTKQLINHRYYTFTPEE 717
           + ++  K+ FI    V   RIP S V R+C   F FP +    D +Q    R Y  +PEE
Sbjct: 118 KTLLICKYDFIMLSCVQLQRIPLSAVYRICLGKFTFPGMS--LDKRQGEGLRIYWGSPEE 175


>AK125682-1|BAC86245.1|  275|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43694 fis, clone TBAES2006568. ).
          Length = 275

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
 Frame = +1

Query: 547 RNIISIKWSFIETFSVDFWRIPRSYVQRLC---FIFPHLCTFTDTKQLINHRYYTFTPEE 717
           + ++  K+ FI    V   RIP S V R+C   F FP +    D +Q    R Y  +PEE
Sbjct: 118 KTLLICKYDFIMLSCVQLQRIPLSAVYRICLGKFTFPGMS--LDKRQGEGLRIYWGSPEE 175


>AK123232-1|BAC85565.1|  275|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41238 fis, clone BRAMY2032014. ).
          Length = 275

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
 Frame = +1

Query: 547 RNIISIKWSFIETFSVDFWRIPRSYVQRLC---FIFPHLCTFTDTKQLINHRYYTFTPEE 717
           + ++  K+ FI    V   RIP S V R+C   F FP +    D +Q    R Y  +PEE
Sbjct: 118 KTLLICKYDFIMLSCVQLQRIPLSAVYRICLGKFTFPGMS--LDKRQGEGLRIYWGSPEE 175


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,978,772
Number of Sequences: 237096
Number of extensions: 1538886
Number of successful extensions: 3343
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3343
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8735159784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)