Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30131
(764 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1005 + 33723743-33723946,33724035-33724256,33724789-337249... 91 9e-19
01_03_0216 + 13870364-13870472,13871406-13871477,13871603-138716... 78 7e-15
05_01_0400 - 3159370-3159385,3159599-3159703,3159972-3160006,316... 73 3e-13
02_02_0418 + 10000744-10000840,10000952-10001023,10001786-100018... 71 1e-12
05_04_0012 + 17145112-17145205,17145681-17145752,17145832-171459... 63 2e-10
04_04_0276 + 24091360-24091464,24091580-24091713,24091813-240924... 31 0.76
01_03_0179 + 13500413-13500768,13502522-13502642,13502876-135029... 29 3.1
12_02_0461 - 19368409-19368627 29 4.1
12_02_0128 - 13969118-13969222,13969329-13969460,13969558-139696... 28 7.1
11_06_0179 + 20952070-20955228 28 7.1
04_01_0422 + 5573833-5574647,5575577-5575692,5576922-5577130,557... 28 7.1
11_01_0709 - 5821246-5821449,5821517-5821634,5821720-5821812,582... 28 9.4
06_03_0497 + 21424732-21424899,21424992-21425057,21425176-214256... 28 9.4
>01_06_1005 +
33723743-33723946,33724035-33724256,33724789-33724901,
33725581-33725950
Length = 302
Score = 91.1 bits (216), Expect = 9e-19
Identities = 42/94 (44%), Positives = 62/94 (65%)
Frame = -3
Query: 762 LVVEAIVENIGVKHKLFKQLDGVAPSHTIFASNTSSLSITEIASVVKRKDKFGGLHFFNP 583
LV+EAIVE+ +K KLF +LD + I ASNTSS+SIT +AS R + G+HFFNP
Sbjct: 92 LVIEAIVESEDIKKKLFVELDKITKPSAILASNTSSISITRLASATNRPCQVIGMHFFNP 151
Query: 582 VPVMRLLEVVKGSETSEATYKTMMDGESRSARPV 481
P+M+L+E+++G++TSE + + R + V
Sbjct: 152 PPIMKLIEIIRGADTSEEVFTKVKSFSERLGKTV 185
Score = 82.6 bits (195), Expect = 3e-16
Identities = 48/109 (44%), Positives = 63/109 (57%)
Frame = -2
Query: 508 WGKSVGKTCITCKDTPGFVVNRLLVPYICEAIRLYERGDASARDIDIAMKLGAGYPMGPL 329
+ + +GKT I +D PGF+VNR+L+P I EA G A+ DID MKLG +PMGPL
Sbjct: 177 FSERLGKTVICSQDYPGFIVNRILMPMINEAFWALYTGVATKEDIDTGMKLGTNHPMGPL 236
Query: 328 ELADYVGLDTNKFILDGWHKKFPDHNSSNPYPC*KSLLLKEN*V*RLGK 182
+LAD++GLD +L H D S PC LL++ RLGK
Sbjct: 237 QLADFIGLDVCLSVLRVLHNGLGDSKYS---PC--PLLVQYVDAGRLGK 280
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 260 GSQLFKPIPLLEKLVAEGKLGVKTGEGFY 174
G + P PLL + V G+LG K G+G Y
Sbjct: 259 GDSKYSPCPLLVQYVDAGRLGKKRGQGVY 287
>01_03_0216 +
13870364-13870472,13871406-13871477,13871603-13871668,
13871767-13871823,13871917-13871984,13872068-13872149,
13872445-13872500,13872645-13872947,13873042-13873128,
13873199-13873373,13873481-13873602,13873689-13873852,
13873925-13874179,13874312-13874433,13874542-13874663,
13875111-13875259,13875346-13875484,13875715-13875750
Length = 727
Score = 78.2 bits (184), Expect = 7e-15
Identities = 35/95 (36%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Frame = -3
Query: 762 LVVEAIVENIGVKHKLFKQLDGVAPSHTIFASNTSSLSITEIASVVKRKDKFGGLHFFNP 583
LV+EA++EN+ +K ++F L+ PSH + A+NTS++ + I + KD+ G HFF+P
Sbjct: 396 LVIEAVIENVKLKQQIFSDLEKYCPSHCVLATNTSTIDLNLIGEKTRSKDRIVGAHFFSP 455
Query: 582 VPVMRLLEVVKGSETSEATYKTMMD-GESRSARPV 481
VM LLE+V+ TS ++D G+ P+
Sbjct: 456 AHVMPLLEIVRTQHTSPQVVVDLLDVGKKIKKTPI 490
Score = 43.6 bits (98), Expect = 2e-04
Identities = 27/66 (40%), Positives = 32/66 (48%)
Frame = -2
Query: 505 GKSVGKTCITCKDTPGFVVNRLLVPYICEAIRLYERGDASARDIDIAMKLGAGYPMGPLE 326
GK + KT I + GF VNR+ PY A+ + G ID A G PMGP
Sbjct: 482 GKKIKKTPIVVGNCTGFAVNRMFFPYTQSALLFVDLG-MDVYKIDRAC-TKFGMPMGPFR 539
Query: 325 LADYVG 308
LAD VG
Sbjct: 540 LADLVG 545
Score = 35.9 bits (79), Expect = 0.035
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = -2
Query: 454 VVNRLLVPYICEAIRLYERGDA-SARDIDIAMKLGAGYPM---GPLELADYVGLDTNKFI 287
+V + P I EA R+ + G A A D+DIA G G+P G + AD +G
Sbjct: 629 IVEMVFFPVINEACRVLDEGIAVKASDLDIASIFGMGFPPYRGGIMFWADSIGAKYIHDK 688
Query: 286 LDGWHKKFPD 257
L+ W K++ D
Sbjct: 689 LEVWAKRYSD 698
>05_01_0400 -
3159370-3159385,3159599-3159703,3159972-3160006,
3160134-3160272,3160457-3160605,3161052-3161173,
3161296-3161417,3161779-3162033,3162108-3162271,
3162311-3162489,3162593-3162767,3162916-3163002,
3163144-3163446,3163539-3163594,3163813-3163894,
3163972-3164039,3164779-3164835,3164926-3164991,
3165121-3165192,3167363-3167459
Length = 782
Score = 72.5 bits (170), Expect = 3e-13
Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Frame = -3
Query: 750 AIVENIGVKHKLFKQLDGVAPSHTIFASNTSSLSITEIASVVKRKDKFGGLHFFNPVPVM 571
A+VEN+ VK ++F L+ PSH + A+NTS++ + I +D+ G HFF+P VM
Sbjct: 415 AVVENVKVKQQVFADLERYCPSHCVLATNTSTIDLDLIGEKTNSQDRIAGAHFFSPAHVM 474
Query: 570 RLLEVVKGSETSEATYKTMMD-GESRSARPV 481
LLE+V+ + TS ++D G+ PV
Sbjct: 475 PLLEIVRSNHTSPQVVVDLLDVGKKIKKTPV 505
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/66 (36%), Positives = 33/66 (50%)
Frame = -2
Query: 505 GKSVGKTCITCKDTPGFVVNRLLVPYICEAIRLYERGDASARDIDIAMKLGAGYPMGPLE 326
GK + KT + + GF VNR+ PY A+ L +RG + + + G PMGP
Sbjct: 497 GKKIKKTPVVVGNCTGFAVNRMFSPYTSIALLLVDRGMDVYKIDQVCTEF--GMPMGPFR 554
Query: 325 LADYVG 308
L D VG
Sbjct: 555 LLDLVG 560
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = -2
Query: 454 VVNRLLVPYICEAIRLYERGDAS-ARDIDIAMKLGAGYPM---GPLELADYVGLDTNKFI 287
+V + P I EA ++ G A+ A D+DIA G G+P G + AD +G
Sbjct: 644 IVEMVFFPVINEACQVLSEGIANKASDLDIASIFGMGFPPYRGGIVYWADSIGAKRIHAR 703
Query: 286 LDGWHKK 266
L W K
Sbjct: 704 LSEWEMK 710
>02_02_0418 +
10000744-10000840,10000952-10001023,10001786-10001848,
10001952-10002008,10002159-10002226,10002327-10002408,
10002517-10002572,10002934-10003236,10003638-10003724,
10004454-10004628,10004813-10004934,10005171-10005334,
10006201-10006455,10006979-10007100,10007220-10007341,
10007452-10007600,10007649-10007652
Length = 665
Score = 70.5 bits (165), Expect = 1e-12
Identities = 29/76 (38%), Positives = 48/76 (63%)
Frame = -3
Query: 762 LVVEAIVENIGVKHKLFKQLDGVAPSHTIFASNTSSLSITEIASVVKRKDKFGGLHFFNP 583
+V+EA++E I +K +F L+ V P H I A+NTS++ + + +D+ G HFF+P
Sbjct: 391 MVIEAVIEKIPLKQSIFSDLEKVCPPHCILATNTSTIDLNVVGEKTNSQDRIIGAHFFSP 450
Query: 582 VPVMRLLEVVKGSETS 535
+M LLE+V+ +TS
Sbjct: 451 AHIMPLLEIVRTEKTS 466
Score = 34.3 bits (75), Expect = 0.11
Identities = 26/85 (30%), Positives = 34/85 (40%)
Frame = -2
Query: 505 GKSVGKTCITCKDTPGFVVNRLLVPYICEAIRLYERGDASARDIDIAMKLGAGYPMGPLE 326
GK + K + + GF VNR PY + L G R ID + G PMGP +
Sbjct: 477 GKMIKKVPVVVGNCTGFAVNRTFFPYTQGSHLLVSIGIDVFR-IDRVIS-SFGMPMGPFQ 534
Query: 325 LADYVGLDTNKFILDGWHKKFPDHN 251
L D G + D + F N
Sbjct: 535 LQDLAGYGVALAVKDIYAAAFGTRN 559
>05_04_0012 +
17145112-17145205,17145681-17145752,17145832-17145911,
17146059-17146175,17146282-17146363,17147086-17147141,
17147258-17147560,17147658-17147744,17148118-17148292,
17148370-17148491,17149028-17149191,17149277-17149531,
17150419-17150540,17150656-17150777,17151302-17151450,
17151565-17151703,17151831-17151866
Length = 724
Score = 63.3 bits (147), Expect = 2e-10
Identities = 27/76 (35%), Positives = 47/76 (61%)
Frame = -3
Query: 762 LVVEAIVENIGVKHKLFKQLDGVAPSHTIFASNTSSLSITEIASVVKRKDKFGGLHFFNP 583
+V+EA++E++ +K K+F L+ S+ I A+NTS++ + I +D+ G HFF+P
Sbjct: 393 VVIEAVIEDLSLKQKIFADLEKYCHSNCILATNTSTIDLHLIGQKTSCQDRIAGAHFFSP 452
Query: 582 VPVMRLLEVVKGSETS 535
M LLE+++ TS
Sbjct: 453 AHAMPLLEIIRTHRTS 468
Score = 37.9 bits (84), Expect = 0.009
Identities = 25/65 (38%), Positives = 31/65 (47%)
Frame = -2
Query: 502 KSVGKTCITCKDTPGFVVNRLLVPYICEAIRLYERGDASARDIDIAMKLGAGYPMGPLEL 323
K + KT I + GF VNR+ P+ A L + G ID + G PMGP L
Sbjct: 480 KQIRKTPIVVGNCTGFAVNRMFFPFTQVAYFLVDYG-LDVYHIDHVI-TKFGMPMGPFRL 537
Query: 322 ADYVG 308
AD VG
Sbjct: 538 ADLVG 542
Score = 34.3 bits (75), Expect = 0.11
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -2
Query: 472 KDTPGFVVNRLLVPYICEAIRLYERGDA-SARDIDIAMKLGAGYP 341
K T +V +L P + EA RL + G A A D+D+A +G G+P
Sbjct: 620 KLTDDEIVEMMLFPVVNEACRLLDEGVAMKASDLDVASIMGRGFP 664
>04_04_0276 +
24091360-24091464,24091580-24091713,24091813-24092454,
24092858-24093044
Length = 355
Score = 31.5 bits (68), Expect = 0.76
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -2
Query: 511 GWGKSVGKTCITCKDTPGFVVNRLLVPYICEAIRLYER 398
GW K + +T + TP V+ L + +C+A RLY R
Sbjct: 106 GWLKRAAEASVTARLTPEHAVDMLKLARLCDAPRLYLR 143
>01_03_0179 +
13500413-13500768,13502522-13502642,13502876-13502998,
13504409-13504497,13504612-13504696,13504852-13505011,
13505096-13505160,13505296-13505349,13505437-13505527,
13505685-13505986,13506084-13506365,13506451-13506764,
13506920-13507080,13507202-13507305,13507379-13507535,
13507652-13507896,13507995-13508327,13508428-13508751,
13508816-13508899,13509001-13509169,13509610-13509731,
13510538-13510792,13511115-13511252
Length = 1377
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 349 GYPMGPLELADYVGLDTNKFILDGWHKKFPDHNSS 245
GY + PL A + TN+F+ W+K FP N +
Sbjct: 744 GYWISPLSYAQNA-ISTNEFLGRSWNKSFPGQNDT 777
>12_02_0461 - 19368409-19368627
Length = 72
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -3
Query: 582 VPVMRLLEVVKGSETSEATYKTMMDG 505
VPVM LLE + G+E+ EA +DG
Sbjct: 24 VPVMSLLEWLDGAESEEAALSVAVDG 49
>12_02_0128 -
13969118-13969222,13969329-13969460,13969558-13969671,
13971843-13971941,13972035-13972171,13972505-13972598,
13973248-13973355,13973442-13973537,13973673-13973845,
13974818-13975172,13975308-13975442,13975524-13975667,
13975762-13976436,13976552-13976617,13976710-13976877
Length = 866
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = -2
Query: 337 GPLELADYVG--LDTNKFILDGWHKKFPDHNSSNP 239
GP ++ D G +D KFIL + DH S +P
Sbjct: 592 GPYDIEDITGHTMDKTKFILVNYSNSSEDHKSQDP 626
>11_06_0179 + 20952070-20955228
Length = 1052
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = +1
Query: 124 NVVCLCLIISIYFFSYL*KPSPVFTPNFPSATSFSSKGMGLKSCDPETSCASHP 285
N C+ FF+Y + PV TPN P ++ F + + DP S HP
Sbjct: 181 NTTVCCMNCRRNFFAYNLQEQPVPTPNVPYSSQFPANMFPNQRRDP-ISRQGHP 233
>04_01_0422 + 5573833-5574647,5575577-5575692,5576922-5577130,
5579676-5579795,5581616-5581744,5581828-5581953,
5582945-5583000,5583084-5583183,5585155-5585272,
5585374-5585583,5585902-5586226,5587094-5587187,
5588021-5588129,5588246-5588514,5589153-5589280,
5589983-5590217,5590858-5591046,5591326-5591609,
5591698-5591890,5592040-5592207,5592429-5592514,
5594391-5594550
Length = 1412
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Frame = -2
Query: 700 WRSSKSHYFRIKHVFSIYNRNCIRRKKERQIWRSSFLQSGPS------DAFARGRQRQ*D 539
WR K + ++V S Y+ +C+R + R +++ + S P D F G +++ D
Sbjct: 1018 WRRRKKIHRLQEYVKSEYDHSCLRSCRSRALYKGLKVGSTPDLMVAYIDFFLGGDEKRLD 1077
Query: 538 IGSYIQ 521
+ S IQ
Sbjct: 1078 VTSTIQ 1083
>11_01_0709 -
5821246-5821449,5821517-5821634,5821720-5821812,
5822065-5822198,5822281-5822559,5822645-5822730,
5822814-5822906,5822998-5823090,5823192-5823299,
5824034-5824060,5824538-5824766
Length = 487
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -2
Query: 304 DTNKFILDGWHKKFPDHNS 248
D KF+L GW+KKFP++ S
Sbjct: 155 DMYKFLL-GWYKKFPEYRS 172
>06_03_0497 +
21424732-21424899,21424992-21425057,21425176-21425634,
21425945-21426088,21426172-21426306,21426418-21426808,
21427256-21427428,21427508-21427615,21427715-21427810,
21427896-21428003,21428644-21428792,21428924-21428925,
21429071-21429207,21429538-21429842,21430922-21431099,
21431192-21431305,21431373-21431504,21431610-21431843
Length = 1032
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = -2
Query: 337 GPLELADYVG--LDTNKFILDGWHKKFPDHNSSNP 239
GP ++ D G +D KFIL + DH S +P
Sbjct: 568 GPYDVEDITGHTMDKTKFILVNYSNSSEDHKSQDP 602
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,129,824
Number of Sequences: 37544
Number of extensions: 420601
Number of successful extensions: 1013
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1009
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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