Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30130X
         (309 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   0.55 
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   0.55 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   0.97 
EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic hor...    21   2.2  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    20   5.2  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    20   5.2  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           20   6.8  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    20   6.8  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    19   9.0  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    19   9.0  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    19   9.0  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    19   9.0  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    19   9.0  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    19   9.0  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    19   9.0  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    19   9.0  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           19   9.0  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    19   9.0  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    19   9.0  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 23.4 bits (48), Expect = 0.55
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -1

Query: 309 CALPTM*CSTDSQRSSGTLQERHV 238
           C LP   CS D  R  G L+  +V
Sbjct: 160 CVLPDCFCSADGTRIPGQLEPANV 183


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 23.4 bits (48), Expect = 0.55
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -1

Query: 309 CALPTM*CSTDSQRSSGTLQERHV 238
           C LP   CS D  R  G L+  +V
Sbjct: 167 CVLPDCFCSADGTRIPGQLEPANV 190


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.6 bits (46), Expect = 0.97
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 56  NKQKHALHCQSSPCGRRRP 112
           N++  +L+C   PCG+  P
Sbjct: 353 NERPWSLYCGEPPCGQLNP 371


>EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic
           hormone 2 protein.
          Length = 68

 Score = 21.4 bits (43), Expect = 2.2
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = -1

Query: 147 LCEHPARHAPRYGRLLPHGEL*QC 76
           LC       P +G+  P GE  +C
Sbjct: 16  LCAAQLNFTPNWGKRAPEGESNRC 39


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 20.2 bits (40), Expect = 5.2
 Identities = 9/24 (37%), Positives = 10/24 (41%)
 Frame = -1

Query: 309 CALPTM*CSTDSQRSSGTLQERHV 238
           C LP   CS D     G L  + V
Sbjct: 168 CVLPDCFCSEDGTTIPGDLPSKDV 191


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 20.2 bits (40), Expect = 5.2
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = -3

Query: 130 PACPPVWAP 104
           P CPP++ P
Sbjct: 31  PRCPPIYEP 39


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 19.8 bits (39), Expect = 6.8
 Identities = 9/23 (39%), Positives = 9/23 (39%)
 Frame = +1

Query: 64  KACTTLSELSVWQEAPIPGGMPG 132
           K CTT           IPG  PG
Sbjct: 285 KICTTTDAAEFLAAQEIPGQNPG 307


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 19.8 bits (39), Expect = 6.8
 Identities = 9/35 (25%), Positives = 15/35 (42%)
 Frame = +1

Query: 133 WMLAQSFKKNLKVSLLRGGXAWSMSSSLEPDGKAP 237
           WM   +    + + L   G AW+M    + +G  P
Sbjct: 283 WMSNGAPSAKIVLGLPTFGRAWAMDDESDINGTPP 317


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -3

Query: 133 SPACPPVWAPPATRR 89
           SP  PP  +PP   R
Sbjct: 94  SPTTPPTPSPPPEER 108


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = +2

Query: 5   QSHRQLSHPGSRRHMPKNKQKHALHCQSSP 94
           Q+  Q S PG+  + P     +   C S P
Sbjct: 17  QARDQQSSPGTDYYNPNANSTYPPACYSPP 46


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = +2

Query: 5   QSHRQLSHPGSRRHMPKNKQKHALHCQSSP 94
           Q+  Q S PG+  + P     +   C S P
Sbjct: 17  QARDQQSSPGTDYYNPNANSTYPPACYSPP 46


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = +2

Query: 5   QSHRQLSHPGSRRHMPKNKQKHALHCQSSP 94
           Q+  Q S PG+  + P     +   C S P
Sbjct: 17  QARDQQSSPGTDYYNPNANSTYPPACYSPP 46


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = -3

Query: 277 LPAFQRYAPGTTRPG 233
           LPA   Y P   RPG
Sbjct: 394 LPALPGYVPVYIRPG 408


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = -3

Query: 277 LPAFQRYAPGTTRPG 233
           LPA   Y P   RPG
Sbjct: 219 LPALPGYVPVYIRPG 233


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = +2

Query: 5   QSHRQLSHPGSRRHMPKNKQKHALHCQSSP 94
           Q+  Q S PG+  + P     +   C S P
Sbjct: 17  QARDQQSSPGTDYYNPNANSTYPPACYSPP 46


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = +2

Query: 5   QSHRQLSHPGSRRHMPKNKQKHALHCQSSP 94
           Q+  Q S PG+  + P     +   C S P
Sbjct: 17  QARDQQSSPGTDYYNPNANSTYPPACYSPP 46


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = +2

Query: 5   QSHRQLSHPGSRRHMPKNKQKHALHCQSSP 94
           Q+  Q S PG+  + P     +   C S P
Sbjct: 17  QARDQQSSPGTDYYNPNANSTYPPACYSPP 46


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = +2

Query: 5   QSHRQLSHPGSRRHMPKNKQKHALHCQSSP 94
           Q+  Q S PG+  + P     +   C S P
Sbjct: 17  QARDQQSSPGTDYYNPNANSTYPPACYSPP 46


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = +2

Query: 5   QSHRQLSHPGSRRHMPKNKQKHALHCQSSP 94
           Q+  Q S PG+  + P     +   C S P
Sbjct: 17  QARDQQSSPGTDYYNPNANSTYPPACYSPP 46


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.313    0.127    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,596
Number of Sequences: 336
Number of extensions: 1670
Number of successful extensions: 19
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5624413
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.1 bits)