Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30130X
(309 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_1161 - 9872947-9873800,9874187-9874331,9874628-9874681 32 0.080
08_02_0530 + 18244933-18245217,18245309-18245383,18246176-182462... 31 0.18
03_02_0790 - 11212540-11212698,11212777-11212873,11212974-112130... 31 0.18
01_05_0788 + 25223373-25223405,25224285-25224373,25224496-252246... 31 0.18
03_03_0246 + 15789635-15794227,15794314-15794555,15794630-157947... 30 0.43
02_04_0228 - 21083917-21084067,21084489-21084577,21084662-210847... 29 0.56
02_02_0012 - 6092081-6092170,6092282-6092369,6093659-6094608 29 0.74
09_04_0654 - 19247051-19247305,19247466-19247534,19247618-192477... 28 1.3
09_02_0229 - 6062825-6064899,6064943-6065432,6065479-6065956,606... 28 1.3
03_05_0540 + 25375261-25376931 28 1.3
09_02_0461 + 9577003-9577065,9577471-9577568,9578339-9578394,957... 28 1.7
05_07_0260 - 28739035-28739085,28739316-28739596,28740545-287405... 28 1.7
01_06_0707 + 31355929-31356244,31356766-31356992,31357081-313572... 28 1.7
09_04_0643 + 19176561-19176644,19176761-19176902,19178084-191781... 27 2.3
06_01_0825 + 6233525-6233740,6234274-6234461,6234544-6234668,623... 27 3.0
05_07_0311 - 29139883-29140359,29140641-29140788,29140883-291409... 27 3.0
04_03_0243 - 13271384-13272865,13272987-13273248,13274617-13276067 27 3.0
01_02_0078 - 10894871-10895841,10897268-10898426 27 3.0
12_01_0477 + 3742751-3745200,3747192-3747502,3747886-3748232 27 4.0
09_04_0199 - 15533619-15534107,15534956-15535362,15535559-155358... 27 4.0
06_03_0559 + 22148773-22149210,22149478-22149684,22150065-221504... 27 4.0
05_03_0242 + 10823312-10823342,10823662-10823732,10824010-108240... 27 4.0
02_03_0246 - 16807619-16808145,16808208-16808868 27 4.0
04_04_0163 - 23217212-23217396,23217503-23217569,23217678-23217743 26 5.2
02_05_1162 - 34593101-34594624 26 5.2
02_05_0968 + 33156585-33156941,33158510-33159902,33160035-331601... 26 5.2
02_05_0004 - 24880826-24882033,24882106-24882276,24882360-24883203 26 5.2
07_03_1007 + 23268771-23269021,23269098-23269128 26 6.9
06_01_0127 - 977667-978719,978875-979051 26 6.9
05_01_0462 - 3658153-3658290,3658394-3658540,3658622-3658720,365... 26 6.9
03_03_0242 + 15765726-15765965,15766703-15766874,15767056-157672... 26 6.9
02_04_0211 + 20957553-20957828,20957944-20958258,20962094-209628... 26 6.9
09_04_0204 - 15565684-15566223,15567272-15567678,15568143-155684... 25 9.2
09_04_0202 - 15544498-15545037,15546043-15546449,15546874-155469... 25 9.2
08_02_1335 - 26226784-26227015,26227493-26228474,26229021-26230686 25 9.2
04_01_0304 + 4136261-4136294,4136360-4136436,4136555-4136634,413... 25 9.2
04_01_0196 + 2287911-2288278,2289187-2289838 25 9.2
04_01_0131 - 1433821-1434564,1435509-1435751 25 9.2
03_05_0704 - 26953474-26953643,26953770-26953801,26953915-269540... 25 9.2
01_06_1224 - 35508842-35510404 25 9.2
01_05_0705 + 24424457-24424948,24425520-24425624,24426097-244262... 25 9.2
01_04_0003 - 14989160-14989445,14989673-14989807,14991418-149915... 25 9.2
01_03_0229 + 13995610-13995844,13996391-13996445,13998126-139982... 25 9.2
01_01_1060 - 8363272-8365912,8366375-8366443,8366479-8366843,836... 25 9.2
>06_01_1161 - 9872947-9873800,9874187-9874331,9874628-9874681
Length = 350
Score = 32.3 bits (70), Expect = 0.080
Identities = 23/76 (30%), Positives = 33/76 (43%)
Frame = -2
Query: 293 CSAARTPSVPAVRSRNDTSGAFPSGSSDDDMLHAXPPRSNDTLRFFLNDCASIQPGMPPG 114
C A V AV ++ G+ SGS + + A DT RF ++ + PG
Sbjct: 259 CHAINPTRVYAVVLESEEDGS-GSGSGTPEKMEALAVCHLDTSRFDPKTPLFVEHNLRPG 317
Query: 113 MGASCHTESSDSVVHA 66
+ CH S DSV+ A
Sbjct: 318 DASVCHFVSRDSVIWA 333
>08_02_0530 +
18244933-18245217,18245309-18245383,18246176-18246292,
18246503-18246631,18246726-18246785,18247271-18247441,
18247596-18247689,18247860-18247951,18248071-18248220,
18248407-18248465,18249735-18249864
Length = 453
Score = 31.1 bits (67), Expect = 0.18
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +1
Query: 118 GGMPGWMLAQSFKKNLKVSLLRGGXAWSMSSSLEPDGKAPDVSFLERTAGTLGVRA 285
GG+P WM A + + +L + GG S +SS P S + AG G A
Sbjct: 9 GGLPAWMTAAAARVDLSSAGGGGGIPGSGASSSSSSSSQPGYSGPHQQAGVAGAAA 64
>03_02_0790 -
11212540-11212698,11212777-11212873,11212974-11213030,
11213291-11213379,11213463-11213549,11213820-11213935,
11214026-11214281,11214361-11214510,11214948-11215106,
11215456-11215493,11215972-11216063,11216528-11216682,
11217185-11217253
Length = 507
Score = 31.1 bits (67), Expect = 0.18
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +1
Query: 25 TSWVSQTYAKEQAKACTTLSELSVWQEAPIPGGMPGWML 141
TSW+ T+ + T +S+ +W + +P G P W+L
Sbjct: 398 TSWIPITWLGKITLE-TYISQFHIWLRSKVPNGQPKWLL 435
>01_05_0788 +
25223373-25223405,25224285-25224373,25224496-25224624,
25224710-25224766,25224844-25224916,25225509-25225667,
25226755-25226904,25227013-25227268,25227358-25227479,
25227531-25227599,25227653-25227739,25227842-25227930,
25228168-25228224,25229162-25229258,25229348-25229506
Length = 541
Score = 31.1 bits (67), Expect = 0.18
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +1
Query: 25 TSWVSQTYAKEQAKACTTLSELSVWQEAPIPGGMPGWMLA 144
TSW+ T+ + T +S++ +W + +P G P W+L+
Sbjct: 432 TSWIPITWLGKITLE-TYISQIHIWLRSNMPNGQPKWLLS 470
>03_03_0246 + 15789635-15794227,15794314-15794555,15794630-15794771,
15796089-15796272,15796349-15796696,15796753-15797450,
15798208-15798900
Length = 2299
Score = 29.9 bits (64), Expect = 0.43
Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = -2
Query: 287 AARTPSVPAVRSRNDTSGAFPSGSSDDDM-LHA-XPPRSNDTLRFFLNDCASIQPGMP-- 120
A +P+V SR TSG P GSS DM +H P SN T F + ++ + P
Sbjct: 1722 AVTSPTVLPPVSRTITSGLGPPGSSRPDMKIHRNLPGDSNSTAILFDKETSTTKEPSPNS 1781
Query: 119 PGMGASCHTESSDSVVHAFACS 54
+ A E++ S V A S
Sbjct: 1782 DDVEAEAEAEAAASAVAVAAIS 1803
>02_04_0228 -
21083917-21084067,21084489-21084577,21084662-21084731,
21084747-21084823,21084954-21085337,21085420-21085760,
21085869-21085950,21086033-21086391,21087084-21087204,
21087427-21087512,21088896-21088944,21089262-21089275,
21089467-21089545
Length = 633
Score = 29.5 bits (63), Expect = 0.56
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -2
Query: 209 DDMLHAXPPRSNDTLRFFLNDCAS 138
+D++H PP S +TL+ F+ D S
Sbjct: 187 EDLIHRRPPVSRNTLKIFIRDATS 210
>02_02_0012 - 6092081-6092170,6092282-6092369,6093659-6094608
Length = 375
Score = 29.1 bits (62), Expect = 0.74
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 184 GGXAWSMSSSLEPDGKAPDVSFLERTAGTLGVRAALHGGQRA 309
GG AW +SL DG+A + + A HGG++A
Sbjct: 246 GGAAWRAVASLPEDGRAVTALAAIGDGRVVAIGAGSHGGEQA 287
>09_04_0654 -
19247051-19247305,19247466-19247534,19247618-19247705,
19248010-19248105,19248650-19248763,19248852-19248985,
19249880-19250326
Length = 400
Score = 28.3 bits (60), Expect = 1.3
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 229 KAPDVSFLERTAGTLGVRAALHGGQR 306
+A VS +E AGT RAA+ GG+R
Sbjct: 34 RAQQVSGVEAAAGTPAARAAVEGGER 59
>09_02_0229 - 6062825-6064899,6064943-6065432,6065479-6065956,
6066333-6066382,6068917-6069172,6069358-6069503
Length = 1164
Score = 28.3 bits (60), Expect = 1.3
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +1
Query: 124 MPGWMLAQSFKKNLKVSLLRGGXAWSMSSSLEPDGKAPDVSFL 252
+PGW+++ S + NL S + L P GK P + +L
Sbjct: 893 LPGWLISSSLETNLPCIEYIHLIGCSFCTQLPPFGKLPQLRYL 935
>03_05_0540 + 25375261-25376931
Length = 556
Score = 28.3 bits (60), Expect = 1.3
Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = -2
Query: 239 SGAFPSGSSDDDMLH-AXPPRSNDTLRFFLNDCASIQPGMPPGMGASCHTESSDS 78
+GA P+GS D LH A ND L+ L AS P SC S D+
Sbjct: 230 NGATPAGS---DALHVAAAAGHNDVLKLLLGKPASASPSSASSASFSCSFTSIDA 281
>09_02_0461 +
9577003-9577065,9577471-9577568,9578339-9578394,
9578446-9578672,9578956-9579045
Length = 177
Score = 27.9 bits (59), Expect = 1.7
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +1
Query: 34 VSQTYAKEQAKACTTLSELSVWQEAPIPGGMPGWMLAQSFKKNL--KVSLLRGGXAWSM 204
V++T KE KA L W PGG P WM+ +N+ + +L G W++
Sbjct: 27 VTRTKYKEPTKA------LIYWPNLSNPGGNPAWMMLLLLMENILFDMIVLAGMGLWTL 79
>05_07_0260 -
28739035-28739085,28739316-28739596,28740545-28740572,
28740653-28740749,28741216-28741272,28741353-28741415,
28741533-28741621,28741779-28741865,28742041-28742162,
28742245-28742500,28742595-28742744,28743120-28743278,
28743820-28743892,28743968-28744024,28744115-28744243,
28744469-28744560,28745220-28745252
Length = 607
Score = 27.9 bits (59), Expect = 1.7
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +1
Query: 73 TTLSELSVWQEAPIPGGMPGWMLA 144
T +S++ +W + P G P W+L+
Sbjct: 446 TYISQIHIWLRSSTPNGQPKWLLS 469
>01_06_0707 +
31355929-31356244,31356766-31356992,31357081-31357257,
31357355-31357510,31357778-31358054,31358192-31358306,
31360349-31360634,31361196-31361381,31361663-31361833,
31362307-31362426
Length = 676
Score = 27.9 bits (59), Expect = 1.7
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = -1
Query: 210 RRHAPRXASPKQ*HFEVLFKRLCEHPARHAPRYGRLLPHGEL 85
RRH+ R K+ F+ L KR+ E HA R +LP G L
Sbjct: 599 RRHSGRPGGMKEETFDQLQKRIPERIIEHAVR--GMLPKGRL 638
>09_04_0643 +
19176561-19176644,19176761-19176902,19178084-19178172,
19178470-19179195
Length = 346
Score = 27.5 bits (58), Expect = 2.3
Identities = 19/60 (31%), Positives = 25/60 (41%)
Frame = -2
Query: 281 RTPSVPAVRSRNDTSGAFPSGSSDDDMLHAXPPRSNDTLRFFLNDCASIQPGMPPGMGAS 102
RTP A+RS PSG D + H PP R L D + + PG+ A+
Sbjct: 219 RTPDGAALRS--------PSGRRYDAVAHCAPPAPWPVFRDALADAGGVVVDLTPGVAAT 270
>06_01_0825 +
6233525-6233740,6234274-6234461,6234544-6234668,
6234858-6234917,6235043-6235074
Length = 206
Score = 27.1 bits (57), Expect = 3.0
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 185 PRSNDTLRFFLNDCASIQPGMPPGMG 108
PR+ +L F ND + I P M P +G
Sbjct: 162 PRTVKSLAAFYNDVSGINPSMDPAVG 187
>05_07_0311 -
29139883-29140359,29140641-29140788,29140883-29140959,
29141227-29141387,29141785-29142803,29142905-29142996,
29143117-29143256,29143397-29143574
Length = 763
Score = 27.1 bits (57), Expect = 3.0
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = -2
Query: 152 NDCASIQPGMPPGMGASCHTESSDSVVHAFACSLAYVCETQDVT 21
N C P P M HT + + + SL Y+C DV+
Sbjct: 640 NLCIRRDPHSRPRMSHVSHTPFFSTFLSTYHLSLIYICTNNDVS 683
>04_03_0243 - 13271384-13272865,13272987-13273248,13274617-13276067
Length = 1064
Score = 27.1 bits (57), Expect = 3.0
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 19 VVTSWVSQTYAKEQAKACTTLSELSVWQEAP-IPGGMPGWMLAQSFKKNLKVSLLR 183
V+ + S Y +E A +E + +E P G +PGW++ + K+N + L R
Sbjct: 528 VLCTECSHNYERE---ASAVKAEAAADEEGPRAAGNLPGWLVPEPPKENYLIELKR 580
>01_02_0078 - 10894871-10895841,10897268-10898426
Length = 709
Score = 27.1 bits (57), Expect = 3.0
Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Frame = +2
Query: 83 QSSPCGRRRPYRGACRAGCSH--SRLKRTSKCHCFGEAXR 196
Q CGR RP R A R H +L R H GE R
Sbjct: 509 QPPRCGRHRPIRRARRRQARHGSGKLVRCQARHAVGEIVR 548
>12_01_0477 + 3742751-3745200,3747192-3747502,3747886-3748232
Length = 1035
Score = 26.6 bits (56), Expect = 4.0
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = -2
Query: 305 RCPPCSAARTPSVPAVRSRNDTSGAFPSGSSDDDMLHAXPPR 180
R P RTPS R R+ + P G DDD PPR
Sbjct: 140 RIPDYHPRRTPSPHRDRDRDRHAAGRPRGRGDDDR-DRDPPR 180
>09_04_0199 -
15533619-15534107,15534956-15535362,15535559-15535862,
15537061-15538397,15539463-15539727
Length = 933
Score = 26.6 bits (56), Expect = 4.0
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +1
Query: 151 FKKNLKVSLLRGGXAWSMSSSLEPDGKAPDVSFLERTAGTLGVR 282
FKK + ++ AW ++ + + S LE +G +GVR
Sbjct: 239 FKKAKDLGMMSEDYAWILTDGISNIANSLSPSILEEMSGAIGVR 282
>06_03_0559 +
22148773-22149210,22149478-22149684,22150065-22150471,
22150655-22151472,22151564-22151674,22151846-22152015
Length = 716
Score = 26.6 bits (56), Expect = 4.0
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +1
Query: 22 VTSWVSQTYAKEQAKACTTLSELSVWQEAPIPGGMPGWMLAQSFKKNLKVSLLRG-GXAW 198
+++W +Q+ A A A + + + +AP+ G PG + +F + LL G G
Sbjct: 9 LSTWATQSSASGPATAPSAGASFDLNSQAPVAEGFPGLGMYGAFLQGDDDELLTGHGRGS 68
Query: 199 SMSSSLEPDGKAPD 240
S+ P A D
Sbjct: 69 SLPPYRPPRAGAGD 82
>05_03_0242 +
10823312-10823342,10823662-10823732,10824010-10824021,
10827329-10827394,10827564-10827766,10827977-10828266,
10828377-10828468,10829876-10830344,10830670-10830978,
10831290-10831364,10831457-10831614
Length = 591
Score = 26.6 bits (56), Expect = 4.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -2
Query: 119 PGMGASCHTESSDSVVHAFACSL 51
PG+G +E D++++ ACSL
Sbjct: 409 PGLGEQDWSEEDDAIINVLACSL 431
>02_03_0246 - 16807619-16808145,16808208-16808868
Length = 395
Score = 26.6 bits (56), Expect = 4.0
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -3
Query: 142 RASSPACPPVWAPPATRRA 86
RA+SP+ P PPAT RA
Sbjct: 125 RAASPSASPCTTPPATARA 143
>04_04_0163 - 23217212-23217396,23217503-23217569,23217678-23217743
Length = 105
Score = 26.2 bits (55), Expect = 5.2
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -1
Query: 78 CSACFCLFFGICLRDPGCDNCLWDWL 1
CSAC C+ G C C DW+
Sbjct: 71 CSACRCVPAGTAGNRETCGRCYTDWV 96
>02_05_1162 - 34593101-34594624
Length = 507
Score = 26.2 bits (55), Expect = 5.2
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -2
Query: 290 SAARTPSVPAVRSRNDTSGAFPSGSSDDDMLHAXPP 183
+A + P PA + A P SDD + A PP
Sbjct: 310 AAQQPPPPPAPATAAPPPAALPRNGSDDSLTRAYPP 345
>02_05_0968 +
33156585-33156941,33158510-33159902,33160035-33160118,
33160216-33160265
Length = 627
Score = 26.2 bits (55), Expect = 5.2
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -2
Query: 278 TPSVPAVRSRNDTSGAFPSGSSDDDMLHAXPPRSND 171
+PSVP+V + SG +PSG + + + S+D
Sbjct: 536 SPSVPSVADDDSGSGGWPSGETIKPRMASSDAASDD 571
>02_05_0004 - 24880826-24882033,24882106-24882276,24882360-24883203
Length = 740
Score = 26.2 bits (55), Expect = 5.2
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -2
Query: 155 LNDCASIQPGMPPGMGASCHTESSD 81
L C ++ P G+G+ CH E+ D
Sbjct: 8 LRRCGDVEIPYPFGVGSGCHLETGD 32
>07_03_1007 + 23268771-23269021,23269098-23269128
Length = 93
Score = 25.8 bits (54), Expect = 6.9
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 62 QKHALHCQSSPCGRRRPYRGACRAGCSHSRLKRTSKCHCFGEA 190
Q++ ++ +S +R+ +R R H+R +R SK FGEA
Sbjct: 36 QQNKMNVTTSSSSKRQ-WRCDGRTSPQHTRFQRRSKAPSFGEA 77
>06_01_0127 - 977667-978719,978875-979051
Length = 409
Score = 25.8 bits (54), Expect = 6.9
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 71 ALHCQSSPCGRRRPYRGACRA 133
A+ C S+ C R PYR C A
Sbjct: 122 AVPCSSAACARLGPYRRGCLA 142
>05_01_0462 -
3658153-3658290,3658394-3658540,3658622-3658720,
3658802-3659253,3659597-3660280,3662072-3662180
Length = 542
Score = 25.8 bits (54), Expect = 6.9
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +2
Query: 11 HRQLSHPGSRRHMPKNKQKHALHCQSSP 94
HR ++H GS+R++ +H + SP
Sbjct: 194 HRYVNHEGSQRNVRGRHDHSTIHLEQSP 221
>03_03_0242 +
15765726-15765965,15766703-15766874,15767056-15767209,
15767287-15767350,15767533-15767640,15767817-15767942,
15768037-15768269,15768565-15768787
Length = 439
Score = 25.8 bits (54), Expect = 6.9
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -2
Query: 161 FFLNDCASIQPGMPPGMGASCH 96
F L+DCA Q M PG G S H
Sbjct: 377 FKLHDCAVCQLVMKPGEGISVH 398
>02_04_0211 +
20957553-20957828,20957944-20958258,20962094-20962801,
20963362-20963609,20963758-20964101,20964200-20964236,
20964270-20964575,20965281-20965347,20965498-20965626
Length = 809
Score = 25.8 bits (54), Expect = 6.9
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -2
Query: 122 PPGMGASCHTESSDSVVHAFACSLAYVCETQDVTTAC 12
P M HT ++ +HAF S E +++T++C
Sbjct: 90 PEKMAGGGHTHWTEDELHAFLESCMEEIEARNITSSC 126
>09_04_0204 -
15565684-15566223,15567272-15567678,15568143-15568446,
15568735-15570065,15570769-15570846,15570943-15571027
Length = 914
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +1
Query: 151 FKKNLKVSLLRGGXAWSMSSSLEPDGKAPDVSFLERTAGTLGVR 282
F K ++ ++ G AW ++ + + S LE G +GVR
Sbjct: 205 FTKAKELGMMSKGYAWILTDGISNIVNSLSPSILEEINGAIGVR 248
>09_04_0202 -
15544498-15545037,15546043-15546449,15546874-15546977,
15547580-15547788,15548092-15549428,15551680-15551941
Length = 952
Score = 25.4 bits (53), Expect = 9.2
Identities = 13/53 (24%), Positives = 23/53 (43%)
Frame = +1
Query: 124 MPGWMLAQSFKKNLKVSLLRGGXAWSMSSSLEPDGKAPDVSFLERTAGTLGVR 282
M + A F K +V ++ G W M+ + + S +E G LG++
Sbjct: 229 MSSTLAASLFTKAKEVGMMSKGFVWIMTDGITNIVDSMSTSVVEAMNGALGIQ 281
>08_02_1335 - 26226784-26227015,26227493-26228474,26229021-26230686
Length = 959
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = -1
Query: 114 YGRLLPHGEL*QCSACFCLFFGICLRDPGCDNC 16
YG+ + L C LFF L + CDNC
Sbjct: 616 YGKAKDNDSLASIEECLALFFKEELLEWRCDNC 648
>04_01_0304 +
4136261-4136294,4136360-4136436,4136555-4136634,
4137244-4137310,4137975-4138166,4138763-4139059
Length = 248
Score = 25.4 bits (53), Expect = 9.2
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -2
Query: 275 PSVPAVRSRNDTSGAFPSGSSDDDMLHAXPPRSNDTL 165
P VPA+R + GA PS S+ + A PP DTL
Sbjct: 141 PRVPALRPCHKPCGAPPSHGSNTCEVWAAPP-LQDTL 176
>04_01_0196 + 2287911-2288278,2289187-2289838
Length = 339
Score = 25.4 bits (53), Expect = 9.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 199 SMSSSLEPDGKAPDVSFLERTAGTLGVRAA 288
+M LEPD PD++F+ +A V A
Sbjct: 297 AMKLLLEPDATLPDLNFITNSASVSSVHDA 326
>04_01_0131 - 1433821-1434564,1435509-1435751
Length = 328
Score = 25.4 bits (53), Expect = 9.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 199 SMSSSLEPDGKAPDVSFLERTAGTLGVRAA 288
+M LEPD PD++F+ +A V A
Sbjct: 279 AMKLLLEPDATLPDLNFITNSASVSSVHDA 308
>03_05_0704 -
26953474-26953643,26953770-26953801,26953915-26954009,
26954107-26954180,26954283-26954412,26954522-26954585,
26954660-26954722,26954795-26954937,26955386-26955523,
26955610-26955731,26955805-26955976,26956559-26956630,
26956753-26956887,26956987-26957103,26957184-26957316,
26957455-26957561,26958060-26958077,26958235-26958379,
26958472-26958671,26960744-26961421
Length = 935
Score = 25.4 bits (53), Expect = 9.2
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -3
Query: 145 VRASSPACPPVWAPPATRRALT 80
V A +PA PP PP++ +A+T
Sbjct: 171 VAAPAPAPPPATLPPSSSKAVT 192
>01_06_1224 - 35508842-35510404
Length = 520
Score = 25.4 bits (53), Expect = 9.2
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = -2
Query: 113 MGASCHTESSDSVVHAFACSLAYVCETQDVTTACG 9
+GAS +E F C++ + ++ V T+CG
Sbjct: 176 VGASEESEEQGRSAATFECNICFDMASEPVVTSCG 210
>01_05_0705 +
24424457-24424948,24425520-24425624,24426097-24426207,
24426675-24426857,24427066-24427192,24427336-24427397,
24427638-24427724,24428703-24428789,24429210-24429323,
24429507-24429635,24429834-24429896,24430333-24430494,
24430611-24430729,24430786-24431794
Length = 949
Score = 25.4 bits (53), Expect = 9.2
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -2
Query: 296 PCSAARTPSVPAVRSRNDTSGAFPSGSSDDDMLHAXPPRSNDTLRF 159
P + + PS+P+++S +SG SGS + PPR N + F
Sbjct: 732 PATISPAPSLPSLQSLAPSSGPQTSGSCVPVDIE-WPPRKNTSSDF 776
>01_04_0003 -
14989160-14989445,14989673-14989807,14991418-14991508,
14991571-14991712,14991924-14992403,14992610-14993548
Length = 690
Score = 25.4 bits (53), Expect = 9.2
Identities = 17/55 (30%), Positives = 22/55 (40%)
Frame = -2
Query: 242 TSGAFPSGSSDDDMLHAXPPRSNDTLRFFLNDCASIQPGMPPGMGASCHTESSDS 78
TS A P +DD +H ND L+D S G G TE +D+
Sbjct: 82 TSPASPLKQADDHHVHIDSDMENDAAEQNLHDSYSEAQTTSLGYGIHRRTEVADA 136
>01_03_0229 +
13995610-13995844,13996391-13996445,13998126-13998211,
13999484-13999671,14000111-14000169,14000618-14000646,
14000742-14001138,14001569-14002028
Length = 502
Score = 25.4 bits (53), Expect = 9.2
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -1
Query: 105 LLPHGEL*QCSACFCLFFGICLRDPGC 25
L P G L QC+ FCL + D C
Sbjct: 78 LAPFGSLLQCNIIFCLLISRVMDDTIC 104
>01_01_1060 -
8363272-8365912,8366375-8366443,8366479-8366843,
8367403-8367550,8367630-8367873,8368105-8368407,
8368639-8368851,8368927-8369002,8369533-8369561,
8369610-8369984,8371784-8371927,8374053-8374086
Length = 1546
Score = 25.4 bits (53), Expect = 9.2
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +2
Query: 11 HRQLSHPGSRRHMPKNKQKHALHCQSSPCGRRRPYRGACRAGCSHSRL-KRTSK-CHC 178
H + S H+ A + ++P G +P A CSH+ + KR S+ CHC
Sbjct: 20 HNRRSEAEISTHVDAAPPDAASNTSAAPSGLVQPPVSPHNACCSHNMVQKRGSQDCHC 77
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.313 0.127 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,619,942
Number of Sequences: 37544
Number of extensions: 226005
Number of successful extensions: 666
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 666
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 375959444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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