Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30130X
(309 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21518| Best HMM Match : zf-C2H2 (HMM E-Value=0) 30 0.33
SB_23085| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.77
SB_17678| Best HMM Match : zf-C2H2 (HMM E-Value=8.3e-16) 29 1.0
SB_56032| Best HMM Match : zf-CCHC (HMM E-Value=0.00047) 28 1.3
SB_38878| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.8
SB_53564| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.1
SB_3713| Best HMM Match : Lectin_C (HMM E-Value=6.6e-10) 27 4.1
SB_49607| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.4
SB_9160| Best HMM Match : EGF (HMM E-Value=0.0019) 26 5.4
SB_4198| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.4
SB_56270| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.4
SB_35886| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.4
SB_4238| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.4
SB_51133| Best HMM Match : Pox_A32 (HMM E-Value=0.028) 26 7.2
SB_45933| Best HMM Match : RVT_1 (HMM E-Value=3.2e-13) 26 7.2
SB_38711| Best HMM Match : Phage_integrase (HMM E-Value=0.0069) 26 7.2
SB_23464| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.2
SB_19405| Best HMM Match : DMP1 (HMM E-Value=3.8) 26 7.2
SB_13304| Best HMM Match : IncA (HMM E-Value=0.3) 26 7.2
SB_1934| Best HMM Match : CHB_HEX_C (HMM E-Value=8.5) 26 7.2
SB_55359| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.2
SB_42031| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.2
SB_29676| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.2
SB_14220| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.2
SB_13743| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.2
SB_5737| Best HMM Match : DED (HMM E-Value=2.9e-18) 26 7.2
SB_5591| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.2
SB_57724| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 25 9.5
SB_36468| Best HMM Match : DUF1643 (HMM E-Value=4.1) 25 9.5
SB_35108| Best HMM Match : AT_hook (HMM E-Value=0.15) 25 9.5
SB_26388| Best HMM Match : Defensin_1 (HMM E-Value=5.5) 25 9.5
SB_8391| Best HMM Match : Dynamin_N (HMM E-Value=9.7e-18) 25 9.5
SB_53102| Best HMM Match : CUB (HMM E-Value=3.3e-40) 25 9.5
SB_34695| Best HMM Match : CXC (HMM E-Value=4.7) 25 9.5
SB_21454| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.5
SB_12271| Best HMM Match : DUF1079 (HMM E-Value=1.2) 25 9.5
SB_810| Best HMM Match : TAF4 (HMM E-Value=4.7e-31) 25 9.5
>SB_21518| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 376
Score = 30.3 bits (65), Expect = 0.33
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +2
Query: 23 SHPGSRRHMPKNKQKHALHCQSSP 94
SHP RRH+ K + A H QSSP
Sbjct: 99 SHPDPRRHIIKQEHVTAAHSQSSP 122
>SB_23085| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 234
Score = 29.1 bits (62), Expect = 0.77
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = -1
Query: 255 LQERHVRGLPVRLQRRRHAPRXASPKQ*HFEVLFKRLCEHPARHAPRYGRLL 100
L + + LP Q+R+HAPR ++ R + +HAPR+G L+
Sbjct: 47 LSKHNTEKLPGVKQKRQHAPRFGLLVVSNYNTEKLRGVKQKRQHAPRFGLLV 98
>SB_17678| Best HMM Match : zf-C2H2 (HMM E-Value=8.3e-16)
Length = 284
Score = 28.7 bits (61), Expect = 1.0
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +2
Query: 20 LSHPGSRRHMPKNKQKHALHCQSSPCGRRRPYRGACRAGCSHSRLKRTSK 169
L+ SR H KN+ + C+ CGR YRG SH R+ K
Sbjct: 129 LASDDSRAHTGKNRTYPSKPCKCKECGRSFRYRGHL---SSHQRIHSGEK 175
>SB_56032| Best HMM Match : zf-CCHC (HMM E-Value=0.00047)
Length = 632
Score = 28.3 bits (60), Expect = 1.3
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +2
Query: 5 QSHRQLSHPGSRRHMPKNKQKHALHCQSSPCGRRRPYRGACRAGCS 142
Q H++ G++ H N + + C CG+R Y CR+G +
Sbjct: 214 QQHKECDRCGAK-HSTGNCRAYGAECHK--CGKRNHYARMCRSGAN 256
>SB_38878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 436
Score = 27.9 bits (59), Expect = 1.8
Identities = 16/31 (51%), Positives = 16/31 (51%)
Frame = +1
Query: 4 PVPQAVVTSWVSQTYAKEQAKACTTLSELSV 96
P VV SWVS KEQA A TL SV
Sbjct: 227 PCALIVVVSWVSFLLPKEQAPARITLGVTSV 257
>SB_53564| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 233
Score = 27.1 bits (57), Expect = 3.1
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 41 RHMPKNKQKHALHCQSSPCGRRRPYR 118
R + + + KH C S P RRRPY+
Sbjct: 106 RQIRQIQHKHIPQCTSFPTWRRRPYK 131
>SB_3713| Best HMM Match : Lectin_C (HMM E-Value=6.6e-10)
Length = 202
Score = 26.6 bits (56), Expect = 4.1
Identities = 10/17 (58%), Positives = 10/17 (58%), Gaps = 1/17 (5%)
Frame = +3
Query: 252 GAYRWNAGSPC-CTTWW 299
G YRW GSP T WW
Sbjct: 173 GIYRWTDGSPVDWTNWW 189
>SB_49607| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4538
Score = 26.2 bits (55), Expect = 5.4
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = -2
Query: 128 GMPPGMGASCHTESSDSVVHAFACSLAYVCETQDV 24
G PP +G C + +D V S+ VC+ +++
Sbjct: 2622 GNPPALGIRCVSNCNDKVSPNLKLSIESVCDEKNI 2656
>SB_9160| Best HMM Match : EGF (HMM E-Value=0.0019)
Length = 497
Score = 26.2 bits (55), Expect = 5.4
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -2
Query: 176 NDTLRFFLND-CASIQPGMPPGMGASCHTESSDSV 75
N L+ FL++ CASI G P G C SSD +
Sbjct: 57 NCGLKCFLDERCASINIGPPVKDGFICELSSSDHI 91
>SB_4198| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1001
Score = 26.2 bits (55), Expect = 5.4
Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Frame = -2
Query: 299 PPCSAARTPSVP----AVRSRNDTSGAFPSGSSDDDMLHAXPPRSND 171
PP + + TP+ P V+ +ND GSS+ +++++ P N+
Sbjct: 388 PPPTPSPTPTTPLQVLVVQGQNDIHVDVVDGSSEQNLINSHPTAKNN 434
>SB_56270| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1207
Score = 26.2 bits (55), Expect = 5.4
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +2
Query: 38 RRHMPKNKQKHALHCQSSPCGRRRPYRGACRAGCSH 145
RR PKN +AL + CG +RPY A A H
Sbjct: 765 RRMDPKNIPFNALIMGPTSCGVQRPYGSAEAADDEH 800
>SB_35886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 481
Score = 26.2 bits (55), Expect = 5.4
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -2
Query: 182 RSNDTLRFFLNDCASIQPGMPPG 114
R+ D+ FF CA+++P +P G
Sbjct: 384 RAEDSFGFFCPSCATLRPPVPSG 406
>SB_4238| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1288
Score = 26.2 bits (55), Expect = 5.4
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +2
Query: 86 SSPCGRRRPYRGACRAGCSHSRLKRTSKCHC 178
S+PCG G C C + L ++ CHC
Sbjct: 1175 SNPCGENN---GGCSHTCLLAPLPKSHTCHC 1202
>SB_51133| Best HMM Match : Pox_A32 (HMM E-Value=0.028)
Length = 1736
Score = 25.8 bits (54), Expect = 7.2
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +2
Query: 62 QKHALHCQSSPCGRRRPYRGACRAGCSHSRL-KRTSKCHC 178
++H S CG RRP R H++L K T C C
Sbjct: 1059 KRHGYRKLSRVCGGRRPNEPHERTARVHTKLSKDTKTCFC 1098
>SB_45933| Best HMM Match : RVT_1 (HMM E-Value=3.2e-13)
Length = 901
Score = 25.8 bits (54), Expect = 7.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 17 QLSHPGSRRHMPKNKQKHALHCQSSPCGRRRPYR 118
QLS SRRH + + H H + RR PYR
Sbjct: 519 QLSLRNSRRHGHLSIRPHPRHMLNPMIRRRMPYR 552
>SB_38711| Best HMM Match : Phage_integrase (HMM E-Value=0.0069)
Length = 331
Score = 25.8 bits (54), Expect = 7.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 17 QLSHPGSRRHMPKNKQKHALHCQSSPCGRRRPYR 118
QLS SRRH + + H H + RR PYR
Sbjct: 7 QLSLRNSRRHGHLSIRPHPRHMLNPMIRRRMPYR 40
>SB_23464| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 660
Score = 25.8 bits (54), Expect = 7.2
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 32 GSRRHMPKNKQKHALHCQSSPCGRR 106
G R+ M + KQ+ ALH Q GRR
Sbjct: 600 GRRKQMARRKQREALH-QKKDIGRR 623
>SB_19405| Best HMM Match : DMP1 (HMM E-Value=3.8)
Length = 551
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +2
Query: 11 HRQLSHPGSRRHMPKNKQKHALHCQSSPCGRR 106
H ++ R H+P+ +H LH PC R
Sbjct: 148 HLAITQCEHRPHLPRTPCEHRLHLARIPCEHR 179
>SB_13304| Best HMM Match : IncA (HMM E-Value=0.3)
Length = 611
Score = 25.8 bits (54), Expect = 7.2
Identities = 18/68 (26%), Positives = 27/68 (39%), Gaps = 5/68 (7%)
Frame = -2
Query: 302 CPPCSAARTPSVPA-----VRSRNDTSGAFPSGSSDDDMLHAXPPRSNDTLRFFLNDCAS 138
CPP TP+VPA V+S D+++ H R D F ++ S
Sbjct: 321 CPPKGTHMTPAVPASVGGDVQSFRLQKICDTQAVLDNEITHHRQVRKKDKRAFAVSHAVS 380
Query: 137 IQPGMPPG 114
+ G+ G
Sbjct: 381 VASGIAAG 388
>SB_1934| Best HMM Match : CHB_HEX_C (HMM E-Value=8.5)
Length = 280
Score = 25.8 bits (54), Expect = 7.2
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +1
Query: 76 TLSELSVWQEAPIPGGMPGWMLAQSFKKNLKVSLLRGGXAWSMSSSLEPDGKAP 237
T ++S + A +PG +P W +++ + KV + G S+ + +P GK P
Sbjct: 7 TSRDISRLEMAVVPGSVPFWEVSRELSR--KVGSVPGIVPGSVPGT-DPSGKCP 57
>SB_55359| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2516
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/17 (58%), Positives = 10/17 (58%), Gaps = 1/17 (5%)
Frame = +3
Query: 252 GAYRWNAGSPC-CTTWW 299
G YRW GSP T WW
Sbjct: 1247 GMYRWTDGSPVDWTHWW 1263
>SB_42031| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 25.8 bits (54), Expect = 7.2
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +1
Query: 76 TLSELSVWQEAPIPGGMPGWMLAQSFKKNLKVSLLRGGXAWSMSSSLEPDGKAP 237
T ++S + A +PG +P W +++ + KV + G S+ + +P GK P
Sbjct: 7 TSRDISRLEMAVVPGSVPFWEVSRELSR--KVGSVPGIVPGSVPGT-DPSGKCP 57
>SB_29676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 531
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/40 (32%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Frame = +2
Query: 68 HALHCQSSPCGRRRPYRGACRAGCSHSRLKRTSKC--HCF 181
HA H ++ + A + GC HSR R C CF
Sbjct: 479 HAAHSMTAAGAGEKSDHTALKGGCRHSRWPRRITCSDDCF 518
>SB_14220| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 125
Score = 25.8 bits (54), Expect = 7.2
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +1
Query: 76 TLSELSVWQEAPIPGGMPGWMLAQSFKKNLKVSLLRGGXAWSMSSSLEPDGKAP 237
T ++S + A +PG +P W +++ + KV + G S+ + +P GK P
Sbjct: 7 TSRDISRLEMAVVPGSVPFWEVSRELSR--KVGSVPGIVPGSVPGT-DPSGKCP 57
>SB_13743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 559
Score = 25.8 bits (54), Expect = 7.2
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 104 RRPYRGACRAGCSHSRLKRT 163
RR R ACR CSH+R T
Sbjct: 91 RRTCRHACRHACSHARRHAT 110
>SB_5737| Best HMM Match : DED (HMM E-Value=2.9e-18)
Length = 1719
Score = 25.8 bits (54), Expect = 7.2
Identities = 16/82 (19%), Positives = 36/82 (43%)
Frame = +1
Query: 1 QPVPQAVVTSWVSQTYAKEQAKACTTLSELSVWQEAPIPGGMPGWMLAQSFKKNLKVSLL 180
Q P++ + W+S+ + + K T++ + VW+ P + + F
Sbjct: 598 QANPKSKINCWISKFFEQLMKKHSQTITFVLVWRSDPKMKNLCK-KVRDIFCIASAFEAF 656
Query: 181 RGGXAWSMSSSLEPDGKAPDVS 246
+ + +S+S E DG+ D++
Sbjct: 657 KDSKVFILSTSPETDGRIDDIA 678
>SB_5591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1038
Score = 25.8 bits (54), Expect = 7.2
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Frame = +2
Query: 38 RRHMPKNK---QKHALHCQSSPCGRRRPYRGACRAGCSHSRLKRTSKC 172
RR P++K ++H S CG RRP R H+ L +KC
Sbjct: 517 RRCAPRDKTHGKRHGYRKLSRVCGGRRPNEPYERKARVHTILSTDTKC 564
>SB_57724| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 3804
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -3
Query: 142 RASSPACPPVWAPPATRRALT 80
R PA PPV PP T RA T
Sbjct: 2382 RVGRPAPPPVPRPPPTIRATT 2402
>SB_36468| Best HMM Match : DUF1643 (HMM E-Value=4.1)
Length = 471
Score = 25.4 bits (53), Expect = 9.5
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3
Query: 276 SPCCTTWWA 302
S CC+TWWA
Sbjct: 110 STCCSTWWA 118
>SB_35108| Best HMM Match : AT_hook (HMM E-Value=0.15)
Length = 1600
Score = 25.4 bits (53), Expect = 9.5
Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Frame = +2
Query: 68 HALHCQSSPCGRRRPYRGACRAGCSHSRLKRTSKC--HCF 181
HA H ++ G R R GC HSR R C CF
Sbjct: 1550 HAAHSMTA-AGTERVTTPPSRRGCRHSRWPRRITCSDDCF 1588
>SB_26388| Best HMM Match : Defensin_1 (HMM E-Value=5.5)
Length = 178
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -2
Query: 152 NDCASIQPGMPPGMGASCHTESSDSVVH 69
N AS++PG+P G S + +V+H
Sbjct: 145 NQAASLRPGIPASRGLSPGNPVTTTVIH 172
>SB_8391| Best HMM Match : Dynamin_N (HMM E-Value=9.7e-18)
Length = 957
Score = 25.4 bits (53), Expect = 9.5
Identities = 18/64 (28%), Positives = 26/64 (40%)
Frame = -2
Query: 290 SAARTPSVPAVRSRNDTSGAFPSGSSDDDMLHAXPPRSNDTLRFFLNDCASIQPGMPPGM 111
S R P PA+ R +T AF S + R+ + + +ND PG PG
Sbjct: 739 SEERAPHRPALNQREETESAFFLHS-----IECMRKRTKVSTQQAVNDWVYWAPGSIPGS 793
Query: 110 GASC 99
+C
Sbjct: 794 DVNC 797
>SB_53102| Best HMM Match : CUB (HMM E-Value=3.3e-40)
Length = 644
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 101 RRRPYRGACRAGCSHSRLKRTSKC 172
RRR RG CRA + +R T +C
Sbjct: 311 RRRVCRGTCRATTTDTRKCNTGEC 334
>SB_34695| Best HMM Match : CXC (HMM E-Value=4.7)
Length = 186
Score = 25.4 bits (53), Expect = 9.5
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Frame = +2
Query: 68 HALHCQSSPCGRRRPYRGACRAGCSHSRLKRTSKC--HCF 181
HA H S G P R GC HSR R C CF
Sbjct: 139 HAAHSMSGEKGDHTP----SRRGCRHSRWPRRITCSDDCF 174
>SB_21454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -2
Query: 266 PAVRSRNDTSGAFPSGSSDDDMLHAXPPRSNDT 168
P R D +G PSGS D PP S+ T
Sbjct: 228 PTSRQHRDRAG-LPSGSKGGDFWWLSPPSSSST 259
>SB_12271| Best HMM Match : DUF1079 (HMM E-Value=1.2)
Length = 1716
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -2
Query: 266 PAVRSRNDTSGAFPSGSSDDDMLHAXPPRSNDT 168
P R D +G PSGS D PP S+ T
Sbjct: 109 PTSRQHRDRAG-LPSGSKGGDFWWLSPPSSSST 140
>SB_810| Best HMM Match : TAF4 (HMM E-Value=4.7e-31)
Length = 883
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -2
Query: 152 NDCASIQPGMPPGMGASCHTESSDSVVH 69
N AS++PG+P G S + +V+H
Sbjct: 72 NQAASLRPGIPASRGLSPGNPVTTTVIH 99
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.313 0.127 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,608,898
Number of Sequences: 59808
Number of extensions: 238568
Number of successful extensions: 655
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 655
length of database: 16,821,457
effective HSP length: 71
effective length of database: 12,575,089
effective search space used: 389827759
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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