Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30130X
         (309 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.         25   0.85 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   0.85 
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   1.1  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    23   2.0  
AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       23   2.6  
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    23   3.4  
AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    23   3.4  
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    23   3.4  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   3.4  

>AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.
          Length = 437

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +2

Query: 2   SQSHRQLSHPGSRRHMPKNKQKH-ALHCQSSPCGRRRPYR 118
           + S +Q+  P  +RH+ +NK+   A   +SS    R P++
Sbjct: 286 ANSQQQMMKPMLQRHLTRNKRSQPARKRKSSKTDHRHPFQ 325


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -2

Query: 197 HAXPPRSNDTLRFFLNDCASIQPGMPPG 114
           H  PP ++    F + D A   PGMPPG
Sbjct: 162 HRPPPIAHQQAPFAM-DPARPNPGMPPG 188


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/36 (30%), Positives = 14/36 (38%)
 Frame = +2

Query: 8   SHRQLSHPGSRRHMPKNKQKHALHCQSSPCGRRRPY 115
           S+ Q  HPG  +H   +   H  H Q       R Y
Sbjct: 171 SYHQQQHPGHSQHHHHHHHHHPHHSQQQHSASPRCY 206


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -2

Query: 299 PPCSAARTPSVPAVRSRNDTSGAFPSGSSDDDML 198
           PPC  ++  +V +V     T+G  P   +DD++L
Sbjct: 448 PPCDWSQLSNVGSVEGATTTAGIAP--VTDDELL 479


>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 23/94 (24%), Positives = 32/94 (34%), Gaps = 4/94 (4%)
 Frame = -2

Query: 296 PCSAARTPSVPAVRSR--NDTSGAFPSGSSDDDMLHAXPPRSNDTLRFFLNDCASIQPGM 123
           P +    PSV    S     T+   P+G++        PP S+       +      PG 
Sbjct: 404 PSTTTMPPSVAPTTSTVAPGTTTTTPTGANPGT---TQPPTSDAPNHTTTSTTTEGNPGT 460

Query: 122 --PPGMGASCHTESSDSVVHAFACSLAYVCETQD 27
             PP     C       V H   C+  Y+C T D
Sbjct: 461 TRPPSGDGPCAGGRYGFVPHPTNCARYYICLTAD 494


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 12/43 (27%), Positives = 18/43 (41%)
 Frame = +2

Query: 50  PKNKQKHALHCQSSPCGRRRPYRGACRAGCSHSRLKRTSKCHC 178
           P+ ++  A+  +S+P   R      C   CS S   R S   C
Sbjct: 37  PRTRRSEAVMTRSTPSSPRLAQASTCPVPCS-SIWSRPSSMRC 78


>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -2

Query: 272 SVPAVRSRNDTSGAFPSGSSDDDMLHAXPPRSNDTLRFF 156
           SVPA  + + +S +  S S++DD+  A    S D   FF
Sbjct: 81  SVPAAGASSSSSSSLLSSSAEDDV--ARITLSKDADAFF 117


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -2

Query: 272 SVPAVRSRNDTSGAFPSGSSDDDMLHAXPPRSNDTLRFF 156
           SVPA  + + +S +  S S++DD+  A    S D   FF
Sbjct: 81  SVPAAGASSSSSSSLLSSSAEDDV--ARITLSKDADAFF 117


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +2

Query: 5   QSHRQLSHPGSRRHMPKNK 61
           Q   QL H G R  M KN+
Sbjct: 158 QQQHQLEHNGGREQMMKNE 176


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.313    0.127    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 371,716
Number of Sequences: 2352
Number of extensions: 6983
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 19884282
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)