Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30130X
(309 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77660-3|CAB01171.1| 471|Caenorhabditis elegans Hypothetical pr... 27 3.5
Z69791-5|CAL36513.1| 281|Caenorhabditis elegans Hypothetical pr... 27 3.5
U41015-11|AAM54187.1| 740|Caenorhabditis elegans Homeodomain in... 27 3.5
U41015-10|AAA82316.1| 821|Caenorhabditis elegans Homeodomain in... 27 3.5
U41015-9|AAM54186.1| 846|Caenorhabditis elegans Homeodomain int... 27 3.5
AC084155-9|AAO25978.1| 423|Caenorhabditis elegans Hypothetical ... 27 3.5
AC084155-8|AAG23358.2| 499|Caenorhabditis elegans Hypothetical ... 27 3.5
U97003-2|AAB52271.2| 376|Caenorhabditis elegans Hypothetical pr... 26 4.7
U40953-6|AAB52651.1| 809|Caenorhabditis elegans Hypothetical pr... 26 4.7
Z49132-5|CAA88984.1| 396|Caenorhabditis elegans Hypothetical pr... 26 6.2
AF040648-3|AAL06034.2| 453|Caenorhabditis elegans Hypothetical ... 26 6.2
AF040648-1|AAK21412.1| 519|Caenorhabditis elegans Hypothetical ... 26 6.2
AC025726-19|AAK73925.1| 477|Caenorhabditis elegans Mitochondria... 26 6.2
AB007816-1|BAA28352.1| 394|Caenorhabditis elegans matrix metall... 26 6.2
X53244-1|CAA37334.1| 75|Caenorhabditis elegans metallothionein... 25 8.1
U64853-6|AAB04979.1| 75|Caenorhabditis elegans Metallothionein... 25 8.1
U64601-8|AAB04576.2| 413|Caenorhabditis elegans Hypothetical pr... 25 8.1
U41023-1|AAA82340.1| 569|Caenorhabditis elegans Hypothetical pr... 25 8.1
M92909-1|AAA28110.1| 75|Caenorhabditis elegans metallothionein... 25 8.1
D17364-1|BAA04180.1| 75|Caenorhabditis elegans metallothionein... 25 8.1
AF067607-3|AAF98607.1| 590|Caenorhabditis elegans Hypothetical ... 25 8.1
>Z77660-3|CAB01171.1| 471|Caenorhabditis elegans Hypothetical
protein F38H4.3 protein.
Length = 471
Score = 26.6 bits (56), Expect = 3.5
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = -2
Query: 281 RTPSVPAVRSRNDTSGAFPSGSSDDDMLHAXPPRSNDTLRFFLND 147
++ PA++ R+ S PSGS D D+ R + F ++
Sbjct: 173 KSDEAPALKGRSGISKEMPSGSEDSDVEVEGDNRKMSVIEFIRSE 217
>Z69791-5|CAL36513.1| 281|Caenorhabditis elegans Hypothetical
protein F39D8.2a protein.
Length = 281
Score = 26.6 bits (56), Expect = 3.5
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -1
Query: 255 LQERHVRGLPVRLQRRRHAPRXASPKQ*HFEVLFKRLCEHP 133
LQE VR +R QR+ +P + K LF+++ HP
Sbjct: 31 LQEALVRAGVIRSQRQGISPTATNIKSPKKSALFEKIASHP 71
>U41015-11|AAM54187.1| 740|Caenorhabditis elegans Homeodomain
interacting proteinkinase protein 1, isoform c protein.
Length = 740
Score = 26.6 bits (56), Expect = 3.5
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = -2
Query: 296 PCSAARTPSVPAVRSRNDTSGAFPSGSSDDDMLHAXPPRSNDTL 165
P + PSV + S D++GA S S A P NDTL
Sbjct: 639 PKKNSPAPSVITLSSDEDSNGAGSSNSGSTTRTGAVNPVRNDTL 682
>U41015-10|AAA82316.1| 821|Caenorhabditis elegans Homeodomain
interacting proteinkinase protein 1, isoform a protein.
Length = 821
Score = 26.6 bits (56), Expect = 3.5
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = -2
Query: 296 PCSAARTPSVPAVRSRNDTSGAFPSGSSDDDMLHAXPPRSNDTL 165
P + PSV + S D++GA S S A P NDTL
Sbjct: 720 PKKNSPAPSVITLSSDEDSNGAGSSNSGSTTRTGAVNPVRNDTL 763
>U41015-9|AAM54186.1| 846|Caenorhabditis elegans Homeodomain
interacting proteinkinase protein 1, isoform b protein.
Length = 846
Score = 26.6 bits (56), Expect = 3.5
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = -2
Query: 296 PCSAARTPSVPAVRSRNDTSGAFPSGSSDDDMLHAXPPRSNDTL 165
P + PSV + S D++GA S S A P NDTL
Sbjct: 745 PKKNSPAPSVITLSSDEDSNGAGSSNSGSTTRTGAVNPVRNDTL 788
>AC084155-9|AAO25978.1| 423|Caenorhabditis elegans Hypothetical
protein Y45G5AM.9b protein.
Length = 423
Score = 26.6 bits (56), Expect = 3.5
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -2
Query: 299 PPCSAARTPSVPAVRSRNDTSG 234
PP S +PSVPAV DTSG
Sbjct: 365 PPSSVIDSPSVPAVDFDWDTSG 386
>AC084155-8|AAG23358.2| 499|Caenorhabditis elegans Hypothetical
protein Y45G5AM.9a protein.
Length = 499
Score = 26.6 bits (56), Expect = 3.5
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -2
Query: 299 PPCSAARTPSVPAVRSRNDTSG 234
PP S +PSVPAV DTSG
Sbjct: 365 PPSSVIDSPSVPAVDFDWDTSG 386
>U97003-2|AAB52271.2| 376|Caenorhabditis elegans Hypothetical
protein F47C10.1 protein.
Length = 376
Score = 26.2 bits (55), Expect = 4.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 108 RLLPHGEL*QCSACFCLFFGICLRDPGCDNC 16
+L+P+ + QCS C L FG+ P C+ C
Sbjct: 8 QLVPNCSI-QCSVCCQLAFGLNYGVPSCNAC 37
>U40953-6|AAB52651.1| 809|Caenorhabditis elegans Hypothetical
protein F53B1.8 protein.
Length = 809
Score = 26.2 bits (55), Expect = 4.7
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Frame = +2
Query: 80 CQSSPCGRRRPYRGACRAGCSH---SRLKRTSKCHC 178
C GR+ Y C AGCS + LK ++C C
Sbjct: 615 CAELDDGRQFTYYSPCYAGCSETYSASLKEYTECSC 650
>Z49132-5|CAA88984.1| 396|Caenorhabditis elegans Hypothetical
protein ZK666.5 protein.
Length = 396
Score = 25.8 bits (54), Expect = 6.2
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Frame = -2
Query: 74 VHAFACSLAYVCETQ--DVTTACGTG 3
VH FA + YVCET D C +G
Sbjct: 364 VHQFAAASNYVCETAACDTNNYCSSG 389
>AF040648-3|AAL06034.2| 453|Caenorhabditis elegans Hypothetical
protein H19M22.3c protein.
Length = 453
Score = 25.8 bits (54), Expect = 6.2
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1
Query: 31 WVSQTYAKEQAKACTTLSELSVWQEAPI 114
W SQ+Y K + K T E S EA I
Sbjct: 140 WSSQSYIKNEKKVTLTFQEASSKDEADI 167
>AF040648-1|AAK21412.1| 519|Caenorhabditis elegans Hypothetical
protein H19M22.3a protein.
Length = 519
Score = 25.8 bits (54), Expect = 6.2
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1
Query: 31 WVSQTYAKEQAKACTTLSELSVWQEAPI 114
W SQ+Y K + K T E S EA I
Sbjct: 172 WSSQSYIKNEKKVTLTFQEASSKDEADI 199
>AC025726-19|AAK73925.1| 477|Caenorhabditis elegans Mitochondrial
processing peptidasealpha protein 1 protein.
Length = 477
Score = 25.8 bits (54), Expect = 6.2
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 149 DCASIQPGMPPGMGASCHTESSDSVVHAFA 60
DC S + M ASCH + DSV+H +
Sbjct: 93 DCQSTRDTMM--YAASCHRDGVDSVIHVLS 120
>AB007816-1|BAA28352.1| 394|Caenorhabditis elegans matrix
metalloproteinase protein.
Length = 394
Score = 25.8 bits (54), Expect = 6.2
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1
Query: 31 WVSQTYAKEQAKACTTLSELSVWQEAPI 114
W SQ+Y K + K T E S EA I
Sbjct: 81 WSSQSYIKNEKKVTLTFQEASSKDEADI 108
>X53244-1|CAA37334.1| 75|Caenorhabditis elegans metallothionein-I
protein.
Length = 75
Score = 25.4 bits (53), Expect = 8.1
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +2
Query: 122 ACRAGCSHSRLKRTSKCHCFGE 187
AC+ C + + K KC C G+
Sbjct: 2 ACKCDCKNKQCKCGDKCECSGD 23
>U64853-6|AAB04979.1| 75|Caenorhabditis elegans Metallothionein
protein 1 protein.
Length = 75
Score = 25.4 bits (53), Expect = 8.1
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +2
Query: 122 ACRAGCSHSRLKRTSKCHCFGE 187
AC+ C + + K KC C G+
Sbjct: 2 ACKCDCKNKQCKCGDKCECSGD 23
>U64601-8|AAB04576.2| 413|Caenorhabditis elegans Hypothetical
protein M03F4.6 protein.
Length = 413
Score = 25.4 bits (53), Expect = 8.1
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +2
Query: 35 SRRHMPKNKQKHALHCQSSPCGRRRPYR--GACRAGCSHSRLKRTSKCHCFG 184
SR P N +++ + +++ C R P + +C+ C L R KC C+G
Sbjct: 51 SRCTCPTNFEEYDIDERTTIC-RLAPAKIGDSCQRDCKPPLLCRDGKCECWG 101
>U41023-1|AAA82340.1| 569|Caenorhabditis elegans Hypothetical
protein F53H8.3 protein.
Length = 569
Score = 25.4 bits (53), Expect = 8.1
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +1
Query: 13 QAVVTSWVSQTYAKEQAKACTTLSELSVWQEAPIPGGMPGWMLAQSFKK 159
Q V+T W++QTY ++ KA +L+ +V + G +L SF +
Sbjct: 31 QVVITDWINQTYI-DRYKAPLSLTVSNVIWSFVVSSIAIGAILGASFTR 78
>M92909-1|AAA28110.1| 75|Caenorhabditis elegans metallothionein I
protein.
Length = 75
Score = 25.4 bits (53), Expect = 8.1
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +2
Query: 122 ACRAGCSHSRLKRTSKCHCFGE 187
AC+ C + + K KC C G+
Sbjct: 2 ACKCDCKNKQCKCGDKCECSGD 23
>D17364-1|BAA04180.1| 75|Caenorhabditis elegans metallothionein-I
protein.
Length = 75
Score = 25.4 bits (53), Expect = 8.1
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +2
Query: 122 ACRAGCSHSRLKRTSKCHCFGE 187
AC+ C + + K KC C G+
Sbjct: 2 ACKCDCKNKQCKCGDKCECSGD 23
>AF067607-3|AAF98607.1| 590|Caenorhabditis elegans Hypothetical
protein C18H7.6 protein.
Length = 590
Score = 25.4 bits (53), Expect = 8.1
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2
Query: 215 SDDDMLHAXPPRSNDTLRFFL 153
S+D+ L+ P +SNDT FF+
Sbjct: 488 SEDEELNFDPRKSNDTYYFFI 508
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.313 0.127 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,190,140
Number of Sequences: 27780
Number of extensions: 169279
Number of successful extensions: 437
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 437
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 333802358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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