Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30128
         (788 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    36   0.002
AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    26   1.2  
AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.         25   3.5  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   8.1  

>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 35.5 bits (78), Expect = 0.002
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +1

Query: 70  KATPENIARAKIIIDRLEANGGTNIDAALGTAIDLIRNRSE 192
           +ATP+N+   K  I+ +E     N  AAL TA +L+R  ++
Sbjct: 327 RATPDNVKEVKTAINAVECENTANFSAALETAFELLRKYNQ 367


>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +2

Query: 188 QSFLPIQHLPTKMKSCLWSPSSFPDGWRSDCW*NEPENN 304
           Q F+  QH P ++++C W  +S    WRS     E E N
Sbjct: 267 QKFVCHQHEPQEIRTCHWGFNS--SNWRSYIHVAESEKN 303


>AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.
          Length = 304

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -2

Query: 424 KPLLRSDNLRRSLGSASSPKASENIVA 344
           KP+L  D   RS+  A  PK+ E  VA
Sbjct: 113 KPVLMMDGAPRSVVKAKHPKSQERKVA 139


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 221 KMKSCLWSPSSFPDGWRSD 277
           K++ CL    S PDG+ SD
Sbjct: 600 KIERCLMKDESCPDGYYSD 618


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 718,050
Number of Sequences: 2352
Number of extensions: 13312
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82744797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)