Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30127
         (731 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_10819| Best HMM Match : DCX (HMM E-Value=6.3e-19)                   31   1.3  
SB_5767| Best HMM Match : Gal_Lectin (HMM E-Value=7.4e-08)             28   6.8  

>SB_10819| Best HMM Match : DCX (HMM E-Value=6.3e-19)
          Length = 1199

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
 Frame = +1

Query: 202 TLIS-GSLWDFFWRLHNTSKQRSGNFFNYY--PKIFLCNLILPHGE 330
           T++S G    +FWR HN   +R   +F  Y  P+   C    P+G+
Sbjct: 492 TIVSCGKEHIYFWRWHNGKLERKNGYFEKYPVPQYLTCMDFAPNGD 537


>SB_5767| Best HMM Match : Gal_Lectin (HMM E-Value=7.4e-08)
          Length = 504

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -2

Query: 271 SPTAALKYCGDAKRNPTTIP 212
           +PT  L+YCGDA    TT P
Sbjct: 94  TPTCRLRYCGDAPALTTTAP 113


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,635,223
Number of Sequences: 59808
Number of extensions: 364559
Number of successful extensions: 762
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 762
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1962001171
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)