Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30125
(712 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 178 3e-45
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 178 3e-45
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 177 6e-45
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 177 6e-45
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 165 3e-41
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 165 3e-41
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 158 3e-39
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 84 1e-16
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 79 4e-15
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 78 5e-15
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 78 5e-15
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 78 7e-15
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 78 7e-15
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 77 1e-14
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 77 2e-14
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 77 2e-14
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 53 2e-07
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 53 2e-07
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 31 0.75
At1g18260.1 68414.m02277 suppressor of lin-12-like protein-relat... 28 5.3
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 178 bits (434), Expect = 3e-45
Identities = 78/85 (91%), Positives = 84/85 (98%)
Frame = +2
Query: 2 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFXDLEPTVVDEVRTGTYRQLFH 181
GIQPDGQMP+DKT+GGGDD+FNTFFSETGAGKHVPRAVF DLEPTV+DEVRTGTYRQLFH
Sbjct: 29 GIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFH 88
Query: 182 PEQLITGKEDAANNYARGHYTIGKE 256
PEQLI+GKEDAANN+ARGHYTIGKE
Sbjct: 89 PEQLISGKEDAANNFARGHYTIGKE 113
Score = 117 bits (281), Expect = 9e-27
Identities = 52/67 (77%), Positives = 61/67 (91%)
Frame = +3
Query: 510 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQNN 689
D + ++DNEAIYDICRR+L IERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQ N
Sbjct: 199 DVSILLDNEAIYDICRRSLSIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTN 258
Query: 690 LVP*PRI 710
LVP PRI
Sbjct: 259 LVPYPRI 265
Score = 111 bits (268), Expect = 3e-25
Identities = 53/77 (68%), Positives = 60/77 (77%)
Frame = +1
Query: 250 KGIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAI 429
K IVDL LDRIRKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F +
Sbjct: 112 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTV 171
Query: 430 YPAPQVSTAVVEPYNSI 480
YP+PQVST+VVEPYNS+
Sbjct: 172 YPSPQVSTSVVEPYNSV 188
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 178 bits (434), Expect = 3e-45
Identities = 78/85 (91%), Positives = 84/85 (98%)
Frame = +2
Query: 2 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFXDLEPTVVDEVRTGTYRQLFH 181
GIQPDGQMP+DKT+GGGDD+FNTFFSETGAGKHVPRAVF DLEPTV+DEVRTGTYRQLFH
Sbjct: 29 GIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFH 88
Query: 182 PEQLITGKEDAANNYARGHYTIGKE 256
PEQLI+GKEDAANN+ARGHYTIGKE
Sbjct: 89 PEQLISGKEDAANNFARGHYTIGKE 113
Score = 117 bits (281), Expect = 9e-27
Identities = 52/67 (77%), Positives = 61/67 (91%)
Frame = +3
Query: 510 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQNN 689
D + ++DNEAIYDICRR+L IERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQ N
Sbjct: 199 DVSILLDNEAIYDICRRSLSIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTN 258
Query: 690 LVP*PRI 710
LVP PRI
Sbjct: 259 LVPYPRI 265
Score = 111 bits (268), Expect = 3e-25
Identities = 53/77 (68%), Positives = 60/77 (77%)
Frame = +1
Query: 250 KGIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAI 429
K IVDL LDRIRKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F +
Sbjct: 112 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTV 171
Query: 430 YPAPQVSTAVVEPYNSI 480
YP+PQVST+VVEPYNS+
Sbjct: 172 YPSPQVSTSVVEPYNSV 188
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 177 bits (431), Expect = 6e-45
Identities = 78/85 (91%), Positives = 83/85 (97%)
Frame = +2
Query: 2 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFXDLEPTVVDEVRTGTYRQLFH 181
GIQPDGQMP DKT+GGGDD+FNTFFSETGAGKHVPRAVF DLEPTV+DEVRTGTYRQLFH
Sbjct: 29 GIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFH 88
Query: 182 PEQLITGKEDAANNYARGHYTIGKE 256
PEQLI+GKEDAANN+ARGHYTIGKE
Sbjct: 89 PEQLISGKEDAANNFARGHYTIGKE 113
Score = 117 bits (282), Expect = 7e-27
Identities = 52/67 (77%), Positives = 62/67 (92%)
Frame = +3
Query: 510 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQNN 689
D + ++DNEAIYDICRR+L+IERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQ N
Sbjct: 199 DVSILLDNEAIYDICRRSLNIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTN 258
Query: 690 LVP*PRI 710
LVP PRI
Sbjct: 259 LVPYPRI 265
Score = 111 bits (268), Expect = 3e-25
Identities = 53/77 (68%), Positives = 60/77 (77%)
Frame = +1
Query: 250 KGIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAI 429
K IVDL LDRIRKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F +
Sbjct: 112 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTV 171
Query: 430 YPAPQVSTAVVEPYNSI 480
YP+PQVST+VVEPYNS+
Sbjct: 172 YPSPQVSTSVVEPYNSV 188
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 177 bits (431), Expect = 6e-45
Identities = 78/85 (91%), Positives = 83/85 (97%)
Frame = +2
Query: 2 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFXDLEPTVVDEVRTGTYRQLFH 181
GIQPDGQMP DKT+GGGDD+FNTFFSETGAGKHVPRAVF DLEPTV+DEVRTGTYRQLFH
Sbjct: 29 GIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFH 88
Query: 182 PEQLITGKEDAANNYARGHYTIGKE 256
PEQLI+GKEDAANN+ARGHYTIGKE
Sbjct: 89 PEQLISGKEDAANNFARGHYTIGKE 113
Score = 117 bits (282), Expect = 7e-27
Identities = 52/67 (77%), Positives = 62/67 (92%)
Frame = +3
Query: 510 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQNN 689
D + ++DNEAIYDICRR+L+IERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQ N
Sbjct: 199 DVSILLDNEAIYDICRRSLNIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTN 258
Query: 690 LVP*PRI 710
LVP PRI
Sbjct: 259 LVPYPRI 265
Score = 111 bits (268), Expect = 3e-25
Identities = 53/77 (68%), Positives = 60/77 (77%)
Frame = +1
Query: 250 KGIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAI 429
K IVDL LDRIRKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F +
Sbjct: 112 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTV 171
Query: 430 YPAPQVSTAVVEPYNSI 480
YP+PQVST+VVEPYNS+
Sbjct: 172 YPSPQVSTSVVEPYNSV 188
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 165 bits (400), Expect = 3e-41
Identities = 72/85 (84%), Positives = 79/85 (92%)
Frame = +2
Query: 2 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFXDLEPTVVDEVRTGTYRQLFH 181
GIQPDG MP+D T+G D+FNTFFSETGAGKHVPRAVF DLEPTV+DEVRTGTYRQLFH
Sbjct: 29 GIQPDGMMPSDTTVGVAHDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFH 88
Query: 182 PEQLITGKEDAANNYARGHYTIGKE 256
PEQLI+GKEDAANN+ARGHYT+GKE
Sbjct: 89 PEQLISGKEDAANNFARGHYTVGKE 113
Score = 119 bits (286), Expect = 2e-27
Identities = 54/67 (80%), Positives = 61/67 (91%)
Frame = +3
Query: 510 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQNN 689
D A ++DNEAIYDICRR+LDIERPTYTNLNRLI QI+SS+T SLRFDGA+NVD+TEFQ N
Sbjct: 199 DVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTN 258
Query: 690 LVP*PRI 710
LVP PRI
Sbjct: 259 LVPYPRI 265
Score = 113 bits (271), Expect = 1e-25
Identities = 54/77 (70%), Positives = 60/77 (77%)
Frame = +1
Query: 250 KGIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAI 429
K IVDL LDR+RKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F I
Sbjct: 112 KEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTI 171
Query: 430 YPAPQVSTAVVEPYNSI 480
YP+PQVSTAVVEPYNS+
Sbjct: 172 YPSPQVSTAVVEPYNSV 188
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 165 bits (400), Expect = 3e-41
Identities = 72/85 (84%), Positives = 79/85 (92%)
Frame = +2
Query: 2 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFXDLEPTVVDEVRTGTYRQLFH 181
GIQPDG MP+D T+G D+FNTFFSETGAGKHVPRAVF DLEPTV+DEVRTGTYRQLFH
Sbjct: 29 GIQPDGMMPSDTTVGVAHDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFH 88
Query: 182 PEQLITGKEDAANNYARGHYTIGKE 256
PEQLI+GKEDAANN+ARGHYT+GKE
Sbjct: 89 PEQLISGKEDAANNFARGHYTVGKE 113
Score = 119 bits (286), Expect = 2e-27
Identities = 54/67 (80%), Positives = 61/67 (91%)
Frame = +3
Query: 510 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQNN 689
D A ++DNEAIYDICRR+LDIERPTYTNLNRLI QI+SS+T SLRFDGA+NVD+TEFQ N
Sbjct: 199 DVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTN 258
Query: 690 LVP*PRI 710
LVP PRI
Sbjct: 259 LVPYPRI 265
Score = 113 bits (271), Expect = 1e-25
Identities = 54/77 (70%), Positives = 60/77 (77%)
Frame = +1
Query: 250 KGIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAI 429
K IVDL LDR+RKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F I
Sbjct: 112 KEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTI 171
Query: 430 YPAPQVSTAVVEPYNSI 480
YP+PQVSTAVVEPYNS+
Sbjct: 172 YPSPQVSTAVVEPYNSV 188
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 158 bits (384), Expect = 3e-39
Identities = 68/85 (80%), Positives = 78/85 (91%)
Frame = +2
Query: 2 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFXDLEPTVVDEVRTGTYRQLFH 181
GIQPDG MP+D T+G D+FNTFFSET +G+HVPRAVF DLEPTV+DEVRTGTYRQLFH
Sbjct: 29 GIQPDGTMPSDSTVGACHDAFNTFFSETSSGQHVPRAVFLDLEPTVIDEVRTGTYRQLFH 88
Query: 182 PEQLITGKEDAANNYARGHYTIGKE 256
PEQLI+GKEDAANN+ARGHYT+G+E
Sbjct: 89 PEQLISGKEDAANNFARGHYTVGRE 113
Score = 113 bits (273), Expect = 8e-26
Identities = 51/67 (76%), Positives = 59/67 (88%)
Frame = +3
Query: 510 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQNN 689
D ++DNEAIYDICRR+LDIERPTY+NLNRLI Q +SS+T SLRFDGA+NVD+TEFQ N
Sbjct: 199 DVVVLLDNEAIYDICRRSLDIERPTYSNLNRLISQTISSLTTSLRFDGAINVDITEFQTN 258
Query: 690 LVP*PRI 710
LVP PRI
Sbjct: 259 LVPYPRI 265
Score = 106 bits (254), Expect = 2e-23
Identities = 50/75 (66%), Positives = 58/75 (77%)
Frame = +1
Query: 256 IVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYP 435
IVD L+R+RKLAD CTGLQGFL+F+ LL+ERLSVD+GKKSKL F IYP
Sbjct: 114 IVDTCLERLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKLGFTIYP 173
Query: 436 APQVSTAVVEPYNSI 480
+PQVSTAVVEPYNS+
Sbjct: 174 SPQVSTAVVEPYNSV 188
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 83.8 bits (198), Expect = 1e-16
Identities = 35/80 (43%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Frame = +2
Query: 26 PTDKTIGGGD---DSFNTFFSETGAGKHVPRAVFXDLEPTVVDEVRTGTYRQLFHPEQLI 196
PT + +G D + N +++E G++VPRA+ DLEP +D VRTG Y Q+F P+ +
Sbjct: 32 PTGRYVGNSDLQLERVNVYYNEASCGRYVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFV 91
Query: 197 TGKEDAANNYARGHYTIGKE 256
G+ A NN+A+GHYT G E
Sbjct: 92 FGQSGAGNNWAKGHYTEGAE 111
Score = 68.1 bits (159), Expect = 5e-12
Identities = 31/67 (46%), Positives = 43/67 (64%)
Frame = +3
Query: 510 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQNN 689
D ++DNEA+YDIC R L + P++ +LN LI +S +T LRF G LN DL + N
Sbjct: 197 DECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVN 256
Query: 690 LVP*PRI 710
L+P PR+
Sbjct: 257 LIPFPRL 263
Score = 64.1 bits (149), Expect = 9e-11
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Frame = +1
Query: 241 HHWKG--IVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 414
H+ +G ++D VLD +RK A+ C LQGF + H LL+ ++ +Y +
Sbjct: 105 HYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMM 164
Query: 415 LEFAIYPAPQVSTAVVEPYNS 477
L F+++P+P+VS VVEPYN+
Sbjct: 165 LTFSVFPSPKVSDTVVEPYNA 185
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 78.6 bits (185), Expect = 4e-15
Identities = 34/85 (40%), Positives = 51/85 (60%)
Frame = +2
Query: 2 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFXDLEPTVVDEVRTGTYRQLFH 181
G+ P G+ D + N +++E G++VPRAV DLEP +D +R+G Y Q+F
Sbjct: 29 GVDPTGRYNGDSA-DLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFR 87
Query: 182 PEQLITGKEDAANNYARGHYTIGKE 256
P+ + G+ A NN+A+GHYT G E
Sbjct: 88 PDNFVFGQSGAGNNWAKGHYTEGAE 112
Score = 70.5 bits (165), Expect = 1e-12
Identities = 32/67 (47%), Positives = 44/67 (65%)
Frame = +3
Query: 510 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQNN 689
D ++DNEA+YDIC R L + P++ +LN LI +S +T SLRF G LN DL + N
Sbjct: 198 DECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCSLRFPGQLNSDLRKLAVN 257
Query: 690 LVP*PRI 710
L+P PR+
Sbjct: 258 LIPFPRL 264
Score = 64.1 bits (149), Expect = 9e-11
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Frame = +1
Query: 241 HHWKG--IVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 414
H+ +G ++D VLD +RK A+ C LQGF + H LL+ ++ +Y +
Sbjct: 106 HYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMM 165
Query: 415 LEFAIYPAPQVSTAVVEPYNS 477
L F+++P+P+VS VVEPYN+
Sbjct: 166 LTFSVFPSPKVSDTVVEPYNA 186
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 78.2 bits (184), Expect = 5e-15
Identities = 31/67 (46%), Positives = 45/67 (67%)
Frame = +2
Query: 56 DSFNTFFSETGAGKHVPRAVFXDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 235
+ N +F+E GK+VPRAV DLEP +D +R+G + Q+F P+ + G+ A NN+A+G
Sbjct: 45 ERINVYFNEASGGKYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKG 104
Query: 236 HYTIGKE 256
HYT G E
Sbjct: 105 HYTEGAE 111
Score = 70.1 bits (164), Expect = 1e-12
Identities = 32/67 (47%), Positives = 43/67 (64%)
Frame = +3
Query: 510 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQNN 689
D ++DNEA+YDIC R L + PT+ +LN LI +S +T LRF G LN DL + N
Sbjct: 197 DECMVLDNEALYDICFRTLKLANPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVN 256
Query: 690 LVP*PRI 710
L+P PR+
Sbjct: 257 LIPFPRL 263
Score = 62.9 bits (146), Expect = 2e-10
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Frame = +1
Query: 241 HHWKG--IVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 414
H+ +G ++D VLD +RK A+ C LQGF + H LL+ ++ +Y +
Sbjct: 105 HYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMM 164
Query: 415 LEFAIYPAPQVSTAVVEPYNS 477
+ F+++P+P+VS VVEPYN+
Sbjct: 165 MTFSVFPSPKVSDTVVEPYNA 185
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 78.2 bits (184), Expect = 5e-15
Identities = 31/64 (48%), Positives = 44/64 (68%)
Frame = +2
Query: 65 NTFFSETGAGKHVPRAVFXDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 244
N +++E G++VPRAV DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT
Sbjct: 48 NVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYT 107
Query: 245 IGKE 256
G E
Sbjct: 108 EGAE 111
Score = 68.5 bits (160), Expect = 4e-12
Identities = 31/67 (46%), Positives = 43/67 (64%)
Frame = +3
Query: 510 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQNN 689
D ++DNEA+YDIC R L + P++ +LN LI +S +T LRF G LN DL + N
Sbjct: 197 DECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVN 256
Query: 690 LVP*PRI 710
L+P PR+
Sbjct: 257 LIPFPRL 263
Score = 62.9 bits (146), Expect = 2e-10
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Frame = +1
Query: 241 HHWKG--IVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 414
H+ +G ++D VLD +RK A+ C LQGF + H LL+ ++ +Y +
Sbjct: 105 HYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMM 164
Query: 415 LEFAIYPAPQVSTAVVEPYNS 477
+ F+++P+P+VS VVEPYN+
Sbjct: 165 MTFSVFPSPKVSDTVVEPYNA 185
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 77.8 bits (183), Expect = 7e-15
Identities = 35/85 (41%), Positives = 50/85 (58%)
Frame = +2
Query: 2 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFXDLEPTVVDEVRTGTYRQLFH 181
GI P G+ D + + N +++E G+ VPRAV DLEP +D +R+G Y Q F
Sbjct: 29 GIDPTGRYTGDSDLQL--ERINVYYNEASCGRFVPRAVLMDLEPGTMDSLRSGPYGQTFR 86
Query: 182 PEQLITGKEDAANNYARGHYTIGKE 256
P+ + G+ A NN+A+GHYT G E
Sbjct: 87 PDNFVFGQSGAGNNWAKGHYTEGAE 111
Score = 68.1 bits (159), Expect = 5e-12
Identities = 31/67 (46%), Positives = 43/67 (64%)
Frame = +3
Query: 510 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQNN 689
D ++DNEA+YDIC R L + P++ +LN LI +S +T LRF G LN DL + N
Sbjct: 197 DECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVN 256
Query: 690 LVP*PRI 710
L+P PR+
Sbjct: 257 LIPFPRL 263
Score = 63.7 bits (148), Expect = 1e-10
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Frame = +1
Query: 241 HHWKG--IVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 414
H+ +G ++D VLD +RK A+ C LQGF + H LL+ ++ +Y +
Sbjct: 105 HYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMM 164
Query: 415 LEFAIYPAPQVSTAVVEPYNS 477
L F+++P+P+VS VVEPYN+
Sbjct: 165 LTFSVFPSPKVSDTVVEPYNA 185
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 77.8 bits (183), Expect = 7e-15
Identities = 35/85 (41%), Positives = 50/85 (58%)
Frame = +2
Query: 2 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFXDLEPTVVDEVRTGTYRQLFH 181
GI P G+ D + + N +++E G+ VPRAV DLEP +D +R+G Y Q F
Sbjct: 29 GIDPTGRYTGDSDLQL--ERINVYYNEASCGRFVPRAVLMDLEPGTMDSLRSGPYGQTFR 86
Query: 182 PEQLITGKEDAANNYARGHYTIGKE 256
P+ + G+ A NN+A+GHYT G E
Sbjct: 87 PDNFVFGQSGAGNNWAKGHYTEGAE 111
Score = 68.1 bits (159), Expect = 5e-12
Identities = 31/67 (46%), Positives = 43/67 (64%)
Frame = +3
Query: 510 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQNN 689
D ++DNEA+YDIC R L + P++ +LN LI +S +T LRF G LN DL + N
Sbjct: 197 DECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVN 256
Query: 690 LVP*PRI 710
L+P PR+
Sbjct: 257 LIPFPRL 263
Score = 63.7 bits (148), Expect = 1e-10
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Frame = +1
Query: 241 HHWKG--IVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 414
H+ +G ++D VLD +RK A+ C LQGF + H LL+ ++ +Y +
Sbjct: 105 HYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMM 164
Query: 415 LEFAIYPAPQVSTAVVEPYNS 477
L F+++P+P+VS VVEPYN+
Sbjct: 165 LTFSVFPSPKVSDTVVEPYNA 185
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 77.0 bits (181), Expect = 1e-14
Identities = 31/64 (48%), Positives = 43/64 (67%)
Frame = +2
Query: 65 NTFFSETGAGKHVPRAVFXDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 244
N +++E G+ VPRAV DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT
Sbjct: 48 NVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYT 107
Query: 245 IGKE 256
G E
Sbjct: 108 EGAE 111
Score = 68.1 bits (159), Expect = 5e-12
Identities = 31/67 (46%), Positives = 43/67 (64%)
Frame = +3
Query: 510 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQNN 689
D ++DNEA+YDIC R L + P++ +LN LI +S +T LRF G LN DL + N
Sbjct: 197 DECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVN 256
Query: 690 LVP*PRI 710
L+P PR+
Sbjct: 257 LIPFPRL 263
Score = 63.7 bits (148), Expect = 1e-10
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Frame = +1
Query: 241 HHWKG--IVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 414
H+ +G ++D VLD +RK A+ C LQGF + H LL+ ++ +Y +
Sbjct: 105 HYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMM 164
Query: 415 LEFAIYPAPQVSTAVVEPYNS 477
L F+++P+P+VS VVEPYN+
Sbjct: 165 LTFSVFPSPKVSDTVVEPYNA 185
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 76.6 bits (180), Expect = 2e-14
Identities = 35/85 (41%), Positives = 51/85 (60%)
Frame = +2
Query: 2 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFXDLEPTVVDEVRTGTYRQLFH 181
GI GQ D + + + +F+E GK+VPRAV DLEP +D +R+G + Q+F
Sbjct: 29 GIDHTGQYVGDSPLQL--ERIDVYFNEASGGKYVPRAVLMDLEPGTMDSLRSGPFGQIFR 86
Query: 182 PEQLITGKEDAANNYARGHYTIGKE 256
P+ + G+ A NN+A+GHYT G E
Sbjct: 87 PDNFVFGQSGAGNNWAKGHYTEGAE 111
Score = 70.1 bits (164), Expect = 1e-12
Identities = 32/67 (47%), Positives = 43/67 (64%)
Frame = +3
Query: 510 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQNN 689
D ++DNEA+YDIC R L + PT+ +LN LI +S +T LRF G LN DL + N
Sbjct: 197 DECMVLDNEALYDICFRTLKLANPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVN 256
Query: 690 LVP*PRI 710
L+P PR+
Sbjct: 257 LIPFPRL 263
Score = 58.8 bits (136), Expect = 3e-09
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Frame = +1
Query: 241 HHWKG--IVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 414
H+ +G ++D VLD +RK A+ LQGF + H LL+ ++ +Y +
Sbjct: 105 HYTEGAELIDSVLDVVRKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMM 164
Query: 415 LEFAIYPAPQVSTAVVEPYNS 477
+ F+++P+P+VS VVEPYN+
Sbjct: 165 MTFSVFPSPKVSDTVVEPYNA 185
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 76.6 bits (180), Expect = 2e-14
Identities = 29/67 (43%), Positives = 45/67 (67%)
Frame = +2
Query: 56 DSFNTFFSETGAGKHVPRAVFXDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 235
+ N +++E G++VPRAV DLEP +D +R+G + Q+F P+ + G+ A NN+A+G
Sbjct: 46 ERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKG 105
Query: 236 HYTIGKE 256
HYT G E
Sbjct: 106 HYTEGAE 112
Score = 70.5 bits (165), Expect = 1e-12
Identities = 32/67 (47%), Positives = 44/67 (65%)
Frame = +3
Query: 510 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQNN 689
D ++DNEA+YDIC R L + P++ +LN LI +S +T SLRF G LN DL + N
Sbjct: 198 DECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCSLRFPGQLNSDLRKLAVN 257
Query: 690 LVP*PRI 710
L+P PR+
Sbjct: 258 LIPFPRL 264
Score = 64.1 bits (149), Expect = 9e-11
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Frame = +1
Query: 241 HHWKG--IVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 414
H+ +G ++D VLD +RK A+ C LQGF + H LL+ ++ +Y +
Sbjct: 106 HYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMM 165
Query: 415 LEFAIYPAPQVSTAVVEPYNS 477
L F+++P+P+VS VVEPYN+
Sbjct: 166 LTFSVFPSPKVSDTVVEPYNA 186
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 53.2 bits (122), Expect = 2e-07
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = +2
Query: 2 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFXDLEPTVVDEVRTGTYRQLFH 181
GI DG + T GG D + FF + ++PRA+ DLEP V++ ++ G YR L++
Sbjct: 30 GISKDGILEDFATQGG--DRKDVFFYQADDQHYIPRALLIDLEPRVINGIQNGDYRNLYN 87
Query: 182 PEQLITGKE--DAANNYARGHY 241
E + A NN+A G++
Sbjct: 88 HENIFVADHGGGAGNNWASGYH 109
Score = 51.6 bits (118), Expect = 5e-07
Identities = 23/66 (34%), Positives = 37/66 (56%)
Frame = +3
Query: 510 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQNN 689
DC ++DN A+ I L + PT+ N L+ ++S+ T +LR+ G +N DL +
Sbjct: 200 DCVVVLDNTALGRIAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLAS 259
Query: 690 LVP*PR 707
L+P PR
Sbjct: 260 LIPTPR 265
Score = 49.2 bits (112), Expect = 3e-06
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +1
Query: 241 HHWKGIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLE 420
H KG+ + ++D I + AD L+GF++ H L+E L+ Y KK
Sbjct: 109 HQGKGVEEEIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQT 168
Query: 421 FAIYP-APQVSTAVVEPYNSI 480
++++P + S VV+PYNS+
Sbjct: 169 YSVFPNQMETSDVVVQPYNSL 189
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 52.8 bits (121), Expect = 2e-07
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = +2
Query: 2 GIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFXDLEPTVVDEVRTGTYRQLFH 181
GI DG + T GG D + FF + ++PRA+ DLEP V++ ++ G YR L++
Sbjct: 30 GISKDGILEDFATQGG--DRKDVFFYQADDQHYIPRALLIDLEPRVINGIQNGEYRNLYN 87
Query: 182 PEQLITGKE--DAANNYARGHY 241
E + A NN+A G++
Sbjct: 88 HENIFLSDHGGGAGNNWASGYH 109
Score = 52.0 bits (119), Expect = 4e-07
Identities = 23/66 (34%), Positives = 37/66 (56%)
Frame = +3
Query: 510 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQNN 689
DC ++DN A+ I L + PT+ N L+ ++S+ T +LR+ G +N DL +
Sbjct: 200 DCVVVLDNTALNRIAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLAS 259
Query: 690 LVP*PR 707
L+P PR
Sbjct: 260 LIPTPR 265
Score = 49.2 bits (112), Expect = 3e-06
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +1
Query: 241 HHWKGIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLE 420
H KG+ + ++D I + AD L+GF++ H L+E L+ Y KK
Sbjct: 109 HQGKGVEEEIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQT 168
Query: 421 FAIYP-APQVSTAVVEPYNSI 480
++++P + S VV+PYNS+
Sbjct: 169 YSVFPNQMETSDVVVQPYNSL 189
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 31.1 bits (67), Expect = 0.75
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -2
Query: 354 AGTSTEGVEDQESLQTGTLVSELADSVQNQIYDS 253
+G TEGVED S LV D ++ QI DS
Sbjct: 609 SGLMTEGVEDHTSSDINLLVDRSFDKIEKQIRDS 642
>At1g18260.1 68414.m02277 suppressor of lin-12-like protein-related
/ sel-1 protein-related similar to Sel-1 homolog
precursor (Suppressor of lin-12-like protein)
(Sel-1L)(SP:Q9UBV2) {Homo sapiens}
Length = 678
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +2
Query: 53 DDSFNTFFSETGAGKHVPRAVFXDLEPTVVDEVRTGTYRQLFHPE 187
+D N+ + G G+ F + EP +E+ G++R +F P+
Sbjct: 34 NDDLNSGGDDNGVGESSDFDEFGESEPKSEEELDPGSWRSIFEPD 78
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,765,437
Number of Sequences: 28952
Number of extensions: 323322
Number of successful extensions: 949
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 947
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1535986264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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