Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30123
         (716 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    26   0.35 
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    25   0.46 
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    24   1.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   1.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   1.4  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   5.7  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   5.7  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   7.6  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   7.6  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   7.6  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -1

Query: 632 RRAGMATNSRLPSPINFLASHRKGF 558
           +RAG  T S +  P+  +  HR GF
Sbjct: 183 KRAGPRTESAVYEPVRIMGVHRPGF 207


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 25.4 bits (53), Expect = 0.46
 Identities = 8/14 (57%), Positives = 13/14 (92%)
 Frame = -2

Query: 490 SFRLNFSVFNIHFV 449
           SFR+NF++FN++ V
Sbjct: 112 SFRMNFAIFNLYMV 125


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +3

Query: 372 LRTKMYLTGIEIWSVYVKVSLLSCAETKWILK 467
           + T  Y+TGI +W + +  + +  A  K+  K
Sbjct: 123 IHTSSYMTGIWVWLINISATYICYAFGKFSCK 154


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +3

Query: 372 LRTKMYLTGIEIWSVYVKVSLLSCAETKWILK 467
           + T  Y+TGI +W + +  + +  A  K+  K
Sbjct: 356 IHTSSYMTGIWVWLINISATYICYAFGKFSCK 387


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +3

Query: 372 LRTKMYLTGIEIWSVYVKVSLLSCAETKWILK 467
           + T  Y+TGI +W + +  + +  A  K+  K
Sbjct: 356 IHTSSYMTGIWVWLINISATYICYAFGKFSCK 387


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 333 DNVLSSCST*PLELRTKMYL 392
           D  L+S    P+++RTK+YL
Sbjct: 107 DETLNSKPLKPVKIRTKVYL 126


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 333 DNVLSSCST*PLELRTKMYL 392
           D  L+S    P+++RTK+YL
Sbjct: 103 DETLNSKPLKPVKIRTKVYL 122


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +1

Query: 487 NYCFPQEKNLQYYDISAKSNYN 552
           NY +     +  Y+ S+ SN+N
Sbjct: 35  NYLYTPSSTIDLYNTSSVSNFN 56


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +1

Query: 487 NYCFPQEKNLQYYDISAKSNYN 552
           NY +     +  Y+ S+ SN+N
Sbjct: 35  NYLYTPSSTIDLYNTSSVSNFN 56


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 12/46 (26%), Positives = 18/46 (39%)
 Frame = -1

Query: 158 CFASTTISYQYTLECGHIICHFRCFIAILLRDCIRKSRFNSFQSKV 21
           CF S   ++ +      I C F   I + +    RK R N   S +
Sbjct: 63  CFNSYMYAFTHIFFFFAICCDFIALIVVNIVHVFRKRRVNYKDSNI 108


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,862
Number of Sequences: 336
Number of extensions: 4240
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)