Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30123
(716 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 164 1e-41
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 67 2e-12
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 66 4e-12
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 64 1e-11
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 62 1e-10
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 60 4e-10
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 59 5e-10
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 58 9e-10
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 54 3e-08
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 54 3e-08
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 53 5e-08
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 52 6e-08
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 50 3e-07
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 50 4e-07
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 48 1e-06
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 48 2e-06
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 37 0.003
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 37 0.003
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 31 0.12
SPAC19D5.03 |cid1||poly|Schizosaccharomyces pombe|chr 1|||Manual 30 0.38
SPBC119.15 |||AAA family ATPase, unknown biological role|Schizos... 29 0.66
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 29 0.66
SPAC17C9.05c |pmc3|prk1, med27|mediator complex subunit Pmc3 |Sc... 29 0.88
SPAC3G9.11c |||pyruvate decarboxylase |Schizosaccharomyces pombe... 28 1.2
SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces ... 28 1.5
SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr... 28 1.5
SPBC1271.14 |||glutamate N-acetyltransferase |Schizosaccharomyce... 27 2.0
SPAC31G5.09c |spk1||MAP kinase Spk1|Schizosaccharomyces pombe|ch... 27 3.5
SPBC13G1.07 |||palmitoyltransferase|Schizosaccharomyces pombe|ch... 25 8.2
SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr 2|... 25 8.2
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 25 8.2
SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit Caf16|Schizos... 25 8.2
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 25 8.2
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 164 bits (399), Expect = 1e-41
Identities = 72/84 (85%), Positives = 77/84 (91%)
Frame = +2
Query: 260 IRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVCEGIPIV 439
I FNVWDTAGQEK GGLRDGYYIQGQC IIMFDVTSR+TYKNVP+W RDLVRVCE IPIV
Sbjct: 58 ICFNVWDTAGQEKLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDLVRVCENIPIV 117
Query: 440 LCGNKVDIKDRKVKAKTIVFHRKR 511
LCGNKVD+K+RKVKAK I FHRK+
Sbjct: 118 LCGNKVDVKERKVKAKAITFHRKK 141
Score = 101 bits (243), Expect = 8e-23
Identities = 45/52 (86%), Positives = 49/52 (94%)
Frame = +3
Query: 105 DMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQ 260
++PTFK VLVGDGGTGKTTFVKRHLTGEFEKKY+ATLGVEVHPL FHTN G+
Sbjct: 6 NVPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGE 57
Score = 100 bits (240), Expect = 2e-22
Identities = 45/67 (67%), Positives = 55/67 (82%)
Frame = +1
Query: 496 FPQEKNLQYYDISAKSNYNFEKPFLWLARKLIGDGNLEFVAMPALLPPEVTMDPPWQNQI 675
F ++KNLQYYDISAKSNYNFEKPFLWLARKL+G+ NLEFVA PAL PPEV +D Q
Sbjct: 137 FHRKKNLQYYDISAKSNYNFEKPFLWLARKLVGNPNLEFVASPALAPPEVQVDQQLLAQY 196
Query: 676 EKDLQDA 696
++++ +A
Sbjct: 197 QQEMNEA 203
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 67.3 bits (157), Expect = 2e-12
Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Frame = +2
Query: 215 GCRSTSSSIPY-EPRPIRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVP 391
G + ++P E ++ +WDTAGQE++ L YY CAI+++D+T + +
Sbjct: 48 GAAFLTQTLPIDENTSVKLEIWDTAGQERYKSLAPMYYRNANCAIVVYDITQAASLEKAK 107
Query: 392 NWHRDLVRVC-EGIPIVLCGNKVDIKDRK 475
+W ++L R EGI I L GNK+D+ +
Sbjct: 108 SWIKELQRQAPEGIVIALAGNKLDLAQER 136
Score = 28.3 bits (60), Expect = 1.2
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 120 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLG 218
K VL+GD GK++ V R + +F+ +T+G
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIG 48
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 66.5 bits (155), Expect = 4e-12
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Frame = +2
Query: 248 EPRPIRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVR-VCE 424
E + ++ +WDTAGQE+F + YY II++DVT + ++ NV W +++ R E
Sbjct: 53 EGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVE 112
Query: 425 GIPIVLCGNKVDIKDRKV 478
G+ +L GNK D+ D+KV
Sbjct: 113 GVNRLLVGNKSDMVDKKV 130
Score = 35.9 bits (79), Expect = 0.006
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +3
Query: 117 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 224
FK +L+GD G GK+ + R + + Y++T+GV+
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVD 44
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 64.5 bits (150), Expect = 1e-11
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Frame = +2
Query: 230 SSSIPYEPRPIRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDL 409
S ++ E R +R +WDTAGQE+F L Y AII++D+T+ ++ N W D
Sbjct: 50 SKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIED- 108
Query: 410 VRVCEG--IPIVLCGNKVDIKDRK 475
VR G + IVL GNK D+ D++
Sbjct: 109 VRAERGDDVIIVLVGNKTDLADKR 132
Score = 35.9 bits (79), Expect = 0.006
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +3
Query: 117 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 224
FK V +G+ GKT+ + R + +F+ Y AT+G++
Sbjct: 12 FKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGID 47
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 61.7 bits (143), Expect = 1e-10
Identities = 29/101 (28%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Frame = +2
Query: 176 FDWRVREKIRCDSGCRSTSSSIPYEPRPIRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMF 355
+D +V + D R S + + + I+ +WDTAGQEKF + YY A++++
Sbjct: 34 WDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDTAGQEKFRSVARNYYRGAAGAVLVY 93
Query: 356 DVTSRVTYKNVPNWHRDLVRVCEG-IPIVLCGNKVDIKDRK 475
DVT++ +++ + +W D+ + I +VL G+K D+++++
Sbjct: 94 DVTNKDSFEELSSWLSDIRAMAPSTICVVLAGSKSDLQNQR 134
Score = 29.5 bits (63), Expect = 0.50
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +3
Query: 120 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRG 257
K VL G GTGK+ ++R + +++ + T+G++ + G
Sbjct: 11 KIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMG 56
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 59.7 bits (138), Expect = 4e-10
Identities = 29/107 (27%), Positives = 58/107 (54%), Gaps = 8/107 (7%)
Frame = +2
Query: 215 GCRSTSSSIPYEPRPIRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPN 394
G + + + + + +WDTAGQE+F L +Y C ++++DV + +++ + +
Sbjct: 42 GADFLTKEVLVDDKVVTLQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDS 101
Query: 395 WHRD-LVRVC----EGIPIVLCGNKVDIKDRK---VKAKTIVFHRKR 511
W + L++ E P +L GNKVD++++K K+K + F + R
Sbjct: 102 WRDEFLIQASPSNPETFPFILLGNKVDVEEQKRMVSKSKALAFCQAR 148
Score = 35.9 bits (79), Expect = 0.006
Identities = 12/35 (34%), Positives = 24/35 (68%)
Frame = +3
Query: 120 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 224
K +++G+ G GKT+ + +++ +F K Y AT+G +
Sbjct: 10 KVIILGESGVGKTSIMNQYVNRKFSKDYKATIGAD 44
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 59.3 bits (137), Expect = 5e-10
Identities = 27/84 (32%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = +2
Query: 215 GCRSTSSSIPYEPRPIRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPN 394
G + +I + + I+ +WDTAGQE++ + YY A+I++D+T + ++ NV
Sbjct: 44 GVEFATRNIVLDNKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGR 103
Query: 395 WHRDLVRVCE-GIPIVLCGNKVDI 463
W ++L + I I+L GNK D+
Sbjct: 104 WLKELREHADSNIVIMLVGNKTDL 127
Score = 36.7 bits (81), Expect = 0.003
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +3
Query: 117 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 224
FK VL+GD G GK+ + R EF + +T+GVE
Sbjct: 11 FKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVE 46
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 58.4 bits (135), Expect = 9e-10
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Frame = +2
Query: 236 SIPYEPRPIRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVR 415
+I + + I+ +WDTAGQE+F + YY ++++DVT + ++ NV W ++ +
Sbjct: 50 TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQ 109
Query: 416 -VCEGIPIVLCGNKVDIKDRK 475
E + +L GNK D +D++
Sbjct: 110 HASENVYKILIGNKCDCEDQR 130
Score = 31.5 bits (68), Expect = 0.12
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +3
Query: 120 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 224
K +L+GD G GK+ + R F ++ T+G++
Sbjct: 11 KLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGID 45
Score = 28.3 bits (60), Expect = 1.2
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +1
Query: 466 RQKS*GENYCFPQEKNLQYYDISAKSNYNFEKPFLWLARKL 588
RQ S + E +++ + SAK+N N ++ F LAR++
Sbjct: 130 RQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREI 170
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 53.6 bits (123), Expect = 3e-08
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +2
Query: 257 PIRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNV-PNWHRDLVRVCEGIP 433
P ++DTAGQE + LR Y Q ++ F VTS +++NV W ++ C G+P
Sbjct: 50 PYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHCPGVP 109
Query: 434 IVLCGNKVDIKD 469
++ G ++D++D
Sbjct: 110 CLIVGTQIDLRD 121
Score = 43.2 bits (97), Expect = 4e-05
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = +3
Query: 108 MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATL 215
MPT KCV+VGDG GKT + + T +F YV T+
Sbjct: 1 MPTIKCVVVGDGAVGKTCLLISYTTNKFPSDYVPTV 36
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 53.6 bits (123), Expect = 3e-08
Identities = 24/97 (24%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Frame = +2
Query: 215 GCRSTSSSIPYEPRPIRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPN 394
G + + + + + +WDTAGQE+F L +Y C +I+++V + ++ +V N
Sbjct: 42 GADFLTKDVVVDDKLVTLQLWDTAGQERFQSLGMAFYRGADCCVIVYNVNNSKSFDSVEN 101
Query: 395 WHRDLVRVCE----GIPIVLCGNKVDIKDRKVKAKTI 493
W ++ + P ++ GN++D KD +A ++
Sbjct: 102 WRQEFLYQTSQDECAFPFIIVGNQID-KDASKRAVSL 137
Score = 35.5 bits (78), Expect = 0.008
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +3
Query: 120 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 224
K V++GD G GKT + + + +F ++Y AT+G +
Sbjct: 10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGAD 44
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 52.8 bits (121), Expect = 5e-08
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +2
Query: 233 SSIPYEPRPIRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNV-PNWHRDL 409
+ + + R I +WDTAGQE + LR Y +I F V + + NV W ++
Sbjct: 45 ADVEVDGRHIELALWDTAGQEDYDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEV 104
Query: 410 VRVCEGIPIVLCGNKVDIKD 469
+ C +PI+L G KVD+++
Sbjct: 105 LHFCSNLPILLVGCKVDLRN 124
Score = 29.1 bits (62), Expect = 0.66
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 120 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATL 215
K V+VGDG GKT + G F + YV T+
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTV 39
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 52.4 bits (120), Expect = 6e-08
Identities = 22/75 (29%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Frame = +2
Query: 269 NVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRV--CEGIPIVL 442
+V DTAGQE++ +R+ Y G+ ++++++TSR ++ + +++ ++RV + P+VL
Sbjct: 59 DVLDTAGQEEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVL 118
Query: 443 CGNKVDIKDRKVKAK 487
NK D++ +V ++
Sbjct: 119 VANKCDLEAERVVSR 133
Score = 29.1 bits (62), Expect = 0.66
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 117 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATL 215
+K V+VGDGG GK+ + + F +Y T+
Sbjct: 9 YKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTI 41
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 50.0 bits (114), Expect = 3e-07
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Frame = +2
Query: 233 SSIPYEP--RPIRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNV-PNWHR 403
+ I Y P + I +WDTAGQE++ LR Y ++ F + + NV W+
Sbjct: 53 TDITYGPNSKVIELALWDTAGQEEYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYP 112
Query: 404 DLVRVCEGIPIVLCGNKVDI-KDR 472
++ C PIVL G K D+ KDR
Sbjct: 113 EVQHFCPRTPIVLVGLKADLRKDR 136
Score = 33.5 bits (73), Expect = 0.031
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +3
Query: 120 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATL 215
K V+VGDGG GKT + +G F ++YV T+
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTV 47
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 49.6 bits (113), Expect = 4e-07
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +2
Query: 254 RPIRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNV-PNWHRDLVRVCEGI 430
+ ++ +WDTAGQE++ LR Y + ++ F + S + +NV W ++ +C +
Sbjct: 54 KSVQLALWDTAGQEEYERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTLCPNV 113
Query: 431 PIVLCGNKVDIKDRKV 478
P +L G K D++ V
Sbjct: 114 PFILVGMKADLRSDPV 129
Score = 31.1 bits (67), Expect = 0.16
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 120 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATL 215
K V+VGDG GKT+ + G F +YV T+
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTV 41
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 48.0 bits (109), Expect = 1e-06
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +2
Query: 233 SSIPYEPRPIRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNV-PNWHRDL 409
+ + + R + +WDTAGQE + LR Y +I F V S + NV W ++
Sbjct: 45 ADVEVDGRHVELALWDTAGQEDYDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEV 104
Query: 410 VRVCEGIPIVLCGNKVDIKD 469
+ C +PI+L K D+++
Sbjct: 105 LHFCSSLPILLVACKADLRN 124
Score = 29.1 bits (62), Expect = 0.66
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 120 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATL 215
K V+VGDG GKT + G F + YV T+
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTV 39
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 47.6 bits (108), Expect = 2e-06
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +2
Query: 260 IRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNV-PNWHRDLVRVCEGIPI 436
I ++WDTAGQE++ LR Y +I F V SR + +NV W ++ C G+ +
Sbjct: 61 IELSLWDTAGQEEYDQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSSNCPGVKL 120
Query: 437 VLCGNKVDIK 466
VL K D++
Sbjct: 121 VLVALKCDLR 130
Score = 28.3 bits (60), Expect = 1.2
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 120 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATL 215
K V++GDG GKT+ + G F + Y T+
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTI 46
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 37.1 bits (82), Expect = 0.003
Identities = 21/80 (26%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Frame = +2
Query: 230 SSSIPYEPRPIRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDL 409
S +I Y+ + + DTAGQ+++ L + I ++++ +TS+ +++ V +
Sbjct: 44 SKNIKYKGQEFATEIIDTAGQDEYSILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKI 103
Query: 410 VR--VCEGIPIVLCGNKVDI 463
+ E +PIV+ GNK D+
Sbjct: 104 LNHTGTEWVPIVVVGNKSDL 123
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 37.1 bits (82), Expect = 0.003
Identities = 19/82 (23%), Positives = 33/82 (40%)
Frame = +2
Query: 215 GCRSTSSSIPYEPRPIRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPN 394
G +I I F++WD GQ +F + + MFD++ + T ++
Sbjct: 44 GVNFMEKTISIRNTEITFSIWDLGGQREFVNMLPMVCNDAVAILFMFDLSRKSTLNSIKE 103
Query: 395 WHRDLVRVCEGIPIVLCGNKVD 460
W+R + +L G K D
Sbjct: 104 WYRQARGFNKTAVPILIGTKYD 125
Score = 32.7 bits (71), Expect = 0.054
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 114 TFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGV 221
T K ++GD GKT+ + ++ G F+++ TLGV
Sbjct: 10 TIKVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGV 45
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 31.5 bits (68), Expect = 0.12
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +2
Query: 248 EPRPIRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRV 418
E R I F VWD GQ+K L Y+ Q I + D R + + H +L R+
Sbjct: 57 EYRNISFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDR---ERISEAHEELQRM 110
>SPAC19D5.03 |cid1||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 405
Score = 29.9 bits (64), Expect = 0.38
Identities = 13/53 (24%), Positives = 26/53 (49%)
Frame = +2
Query: 359 VTSRVTYKNVPNWHRDLVRVCEGIPIVLCGNKVDIKDRKVKAKTIVFHRKRIC 517
++ +Y+ VPN H++ + C + N++ I D++ K K R+C
Sbjct: 28 ISKSCSYQKVPNSHKEFTKFCYEV-----YNEIKISDKEFKEKRAALDTLRLC 75
>SPBC119.15 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 367
Score = 29.1 bits (62), Expect = 0.66
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +3
Query: 126 VLVGDGGTGKTTFVKR---HLTGEFEKKYVATLGVEVHPLVFHTN 251
++VG G+GKTTF+++ HL + + Y+ L V L + N
Sbjct: 12 IVVGMAGSGKTTFMQQLNAHLHSKNKPPYILNLDPAVRNLPYEAN 56
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 29.1 bits (62), Expect = 0.66
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 260 IRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFD 358
I+FNVWD GQ+K L Y+ + I + D
Sbjct: 65 IKFNVWDVGGQDKIRPLWRHYFTGTKGLIFVVD 97
>SPAC17C9.05c |pmc3|prk1, med27|mediator complex subunit Pmc3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 273
Score = 28.7 bits (61), Expect = 0.88
Identities = 15/57 (26%), Positives = 24/57 (42%)
Frame = +3
Query: 177 LTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQPDKRSLVVLETDTIFKDNVLS 347
LT K + L E+ + FH RG+F + C + D + + F N+ S
Sbjct: 155 LTTHENKSFTLKLANELEFIFFHDTRGKFSVYCSSSKDDAITFSINRNNNFLGNLWS 211
>SPAC3G9.11c |||pyruvate decarboxylase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 570
Score = 28.3 bits (60), Expect = 1.2
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Frame = -2
Query: 424 FTYTDQISMPVRYIF-VRNSRGYVEHDDSTLSLNIVSVSKTTKLLLSGCVP--HIKTNWP 254
+ YTD + +F V + +EH+ + L ++ SK +L+ CV HI+
Sbjct: 177 YFYTDASPLKTPLVFPVPENNKEIEHEVVSEILELIEKSKNPSILVDACVSRFHIQQETQ 236
Query: 253 RFVWNTRGCT-STPRVATYFFSNSP 182
F+ T T TP T +SP
Sbjct: 237 DFIDATHFPTYVTPMGKTAINESSP 261
>SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 308
Score = 27.9 bits (59), Expect = 1.5
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 5/39 (12%)
Frame = +2
Query: 269 NVWDTAGQEKF-----GGLRDGYYIQGQCAIIMFDVTSR 370
N+WD GQE F RD + Q I +FDV SR
Sbjct: 54 NLWDCGGQEAFMENYLSAQRDHIFRNVQVLIYVFDVESR 92
>SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 593
Score = 27.9 bits (59), Expect = 1.5
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 126 VLVGDGGTGKTTFVK 170
VL+G+ GTGKTTF K
Sbjct: 379 VLLGENGTGKTTFCK 393
>SPBC1271.14 |||glutamate N-acetyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 445
Score = 27.5 bits (58), Expect = 2.0
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 364 GYVEHDDSTLSLNIVSVSKTTKLLLSGCVPHIKTNW 257
G ++ D T + I+S + T + GC P+ KTNW
Sbjct: 393 GEPQNVDETRASEILSQDELTVDVDLGCGPYAKTNW 428
>SPAC31G5.09c |spk1||MAP kinase Spk1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 372
Score = 26.6 bits (56), Expect = 3.5
Identities = 14/56 (25%), Positives = 25/56 (44%)
Frame = -3
Query: 318 PSLRPPNFSCPAVSHTLKRIGRGSYGILEDVLRHPESQRIFSRTLQSNVF*QRLFC 151
P NF P + IG+G+YG++ L P ++ + + + F +FC
Sbjct: 26 PHTHDLNFELPEEYEMINLIGQGAYGVVCAALHKPSGLKVAVKKI--HPFNHPVFC 79
>SPBC13G1.07 |||palmitoyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 356
Score = 25.4 bits (53), Expect = 8.2
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +2
Query: 314 DGYYIQGQCAIIMFDVTSRVTYKNVP 391
D Y G+C+ M +++ V YKN P
Sbjct: 53 DSRYADGRCSAAMRSLSNYVLYKNNP 78
>SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 362
Score = 25.4 bits (53), Expect = 8.2
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +1
Query: 511 NLQYYDISAKSNYNFEKPFLWL 576
N+ Y +I++K NY+ + + WL
Sbjct: 244 NMPYIEITSKHNYDIDFKYKWL 265
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 25.4 bits (53), Expect = 8.2
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 123 CVLVGDGGTGKTTFVK 170
C+LVGD TGKT ++
Sbjct: 1872 CILVGDTATGKTCILR 1887
>SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit
Caf16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 280
Score = 25.4 bits (53), Expect = 8.2
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +3
Query: 30 LERVKSRFSYTIXXXXXXXXXXMADDMPT-FKCVLVGDGGTGKTTFVK 170
+E S SYT + D+P + +LVG G GK+T +K
Sbjct: 1 MEVTVSNLSYTFSPKQPLSLDHVTLDLPKGSRTLLVGANGAGKSTLLK 48
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 25.4 bits (53), Expect = 8.2
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +2
Query: 248 EPRPIRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVCEG 427
E +RF +WD GQ+ Y+ + I + D + + N ++L+ V E
Sbjct: 56 EVEGLRFTIWDIGGQKTLRNFWKNYFESTEAIIWVVDSLDDLRLEECRNTLQELL-VEEK 114
Query: 428 I---PIVLCGNKVDI 463
+ I++ NK D+
Sbjct: 115 LLFTSILVLANKSDV 129
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,243,914
Number of Sequences: 5004
Number of extensions: 71463
Number of successful extensions: 318
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 282
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 311
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 335201398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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