Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30122X
         (529 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2FQX9 Cluster: Glycosyl transferase, family 39; n=1; M...    35   1.3  
UniRef50_A2STE8 Cluster: Glycosyl transferase, family 39; n=1; M...    33   5.4  

>UniRef50_Q2FQX9 Cluster: Glycosyl transferase, family 39; n=1;
           Methanospirillum hungatei JF-1|Rep: Glycosyl
           transferase, family 39 - Methanospirillum hungatei
           (strain JF-1 / DSM 864)
          Length = 515

 Score = 34.7 bits (76), Expect = 1.3
 Identities = 18/39 (46%), Positives = 24/39 (61%)
 Frame = +1

Query: 37  GPFLKYVELALFALFGESIDIKVKGTKTYKSDIIIFLIH 153
           GPFL Y+  ALF +FG+S D+ V+         IIFLI+
Sbjct: 67  GPFLYYITAALFRIFGDS-DLLVRLLPAVFGSAIIFLIY 104


>UniRef50_A2STE8 Cluster: Glycosyl transferase, family 39; n=1;
           Methanocorpusculum labreanum Z|Rep: Glycosyl
           transferase, family 39 - Methanocorpusculum labreanum
           (strain ATCC 43576 / DSM 4855 / Z)
          Length = 540

 Score = 32.7 bits (71), Expect = 5.4
 Identities = 16/41 (39%), Positives = 25/41 (60%)
 Frame = +1

Query: 37  GPFLKYVELALFALFGESIDIKVKGTKTYKSDIIIFLIHWL 159
           GPFL Y+  ++FALFG+S D+  +         +I L++WL
Sbjct: 66  GPFLYYITASMFALFGDS-DLVGRILPCIAGCALIPLVYWL 105


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 520,728,172
Number of Sequences: 1657284
Number of extensions: 9824063
Number of successful extensions: 20452
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 19921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20447
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33455602480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)