Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30122X
         (529 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical pr...    28   4.8  
Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical pr...    28   4.8  
Z72515-2|CAA96682.3|  329|Caenorhabditis elegans Hypothetical pr...    28   4.8  
U40061-1|AAA81148.2|  573|Caenorhabditis elegans Hypothetical pr...    28   4.8  
Z68003-1|CAA91975.1|  664|Caenorhabditis elegans Hypothetical pr...    27   8.3  
U76403-1|AAB39735.1|  664|Caenorhabditis elegans degenerin protein.    27   8.3  

>Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical
           protein F29G6.3c protein.
          Length = 1453

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
 Frame = +2

Query: 191 LIRKSQKDYM-KINYWYFFFFA*RVKATSSLPYWCKMIAEVNRHHYMNATCHETSGLNLN 367
           L+RK+ +D+  K+N+ + F  A   K T ++    K +  V+ HHY+  T H+T   N+N
Sbjct: 767 LVRKTTEDHQQKVNHEHHFIPA--EKKTEAV----KDV--VHEHHYIPLTAHKTDEHNVN 818


>Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical
           protein F29G6.3b protein.
          Length = 1785

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
 Frame = +2

Query: 191 LIRKSQKDYM-KINYWYFFFFA*RVKATSSLPYWCKMIAEVNRHHYMNATCHETSGLNLN 367
           L+RK+ +D+  K+N+ + F  A   K T ++    K +  V+ HHY+  T H+T   N+N
Sbjct: 767 LVRKTTEDHQQKVNHEHHFIPA--EKKTEAV----KDV--VHEHHYIPLTAHKTDEHNVN 818


>Z72515-2|CAA96682.3|  329|Caenorhabditis elegans Hypothetical
           protein T11A5.2 protein.
          Length = 329

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 523 LNLICCICSRPIFM*QYWVLWDRR 452
           +NLI CI   P+F+   W +W  +
Sbjct: 24  INLIICILGLPVFLVYTWKIWSAK 47


>U40061-1|AAA81148.2|  573|Caenorhabditis elegans Hypothetical
           protein ZK563.2 protein.
          Length = 573

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 10/34 (29%), Positives = 21/34 (61%)
 Frame = -3

Query: 191 VTVKTFQITHYNQWIRKIMMSDLYVFVPFTFISI 90
           ++VK   IT + +W   + +S +++ +PFT I +
Sbjct: 430 LSVKLGVITDHYRWFIVVFISTVFLIIPFTIIGL 463


>Z68003-1|CAA91975.1|  664|Caenorhabditis elegans Hypothetical
           protein E02H4.1 protein.
          Length = 664

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +3

Query: 51  ICRASFVRAVRRIDRYKSEGHKDV*I*HHNFPYPLVVMCNLKRFHCHL 194
           +C  SF     + DR   E   +V +   + P+P + +CNL  F  HL
Sbjct: 80  LCMYSFSHVKDKYDR--KEKIVNVELVFESAPFPAITVCNLNPFKNHL 125


>U76403-1|AAB39735.1|  664|Caenorhabditis elegans degenerin protein.
          Length = 664

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +3

Query: 51  ICRASFVRAVRRIDRYKSEGHKDV*I*HHNFPYPLVVMCNLKRFHCHL 194
           +C  SF     + DR   E   +V +   + P+P + +CNL  F  HL
Sbjct: 80  LCMYSFSHVKDKYDR--KEKIVNVELVFESAPFPAITVCNLNPFKNHL 125


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,337,700
Number of Sequences: 27780
Number of extensions: 249801
Number of successful extensions: 631
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 631
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1038911524
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)