Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30120
(792 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0563 - 34738732-34738890,34738965-34739009,34739154-347392... 136 2e-32
07_01_0971 + 8169197-8169311,8170351-8170458,8170533-8170725,817... 128 4e-30
01_06_1654 - 38924090-38924101,38924183-38924215,38924737-389248... 116 2e-26
05_06_0014 + 24854462-24854570,24854958-24855065,24855240-248554... 111 6e-25
03_06_0382 - 33530943-33530966,33531160-33531360,33535494-33537026 76 4e-14
04_03_0812 - 19922208-19922357,19922448-19922564,19922681-199227... 72 6e-13
10_08_0225 - 15995436-15995555,15995655-15995735,15995813-159959... 29 3.2
06_03_1142 + 27961999-27962263,27963735-27965080,27965158-279654... 29 4.2
03_02_0177 - 6185091-6185355,6185468-6185524,6185725-6186089,618... 29 4.2
03_04_0209 + 18581667-18582155 29 5.6
12_02_0028 - 12437332-12437576,12438436-12438537,12438619-124390... 28 7.4
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 28 7.4
06_03_1275 + 28903961-28904123,28904225-28904322,28904406-289045... 28 7.4
03_05_1007 - 29637911-29638333,29640095-29640282,29640688-296407... 28 7.4
01_01_0588 + 4372877-4372949,4374328-4376262,4376940-4377015,437... 28 7.4
06_03_1514 + 30696632-30696724,30696857-30697009,30697226-306973... 28 9.8
05_01_0421 + 3308692-3309070,3309199-3309339,3309776-3309897,331... 28 9.8
04_03_0741 + 19187333-19188868,19189264-19189490,19189578-191898... 28 9.8
01_06_0480 + 29639124-29639412,29639476-29639552,29639639-296397... 28 9.8
01_01_0429 + 3254291-3254435,3254902-3255210,3255286-3256747,325... 28 9.8
>03_06_0563 -
34738732-34738890,34738965-34739009,34739154-34739201,
34739291-34739386,34739467-34739534,34739633-34739690,
34739783-34739869,34740004-34740051,34740360-34740416,
34740525-34740783,34740877-34741102,34741168-34741275,
34741885-34741987
Length = 453
Score = 136 bits (329), Expect = 2e-32
Identities = 77/170 (45%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Frame = +1
Query: 256 YALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGP 435
YA+S K+ FS++ K LV+QF+VKHEQ +DCGGGY+K+ ++QK GETPY IMFGP
Sbjct: 92 YAISAKYPEFSSKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGETPYSIMFGP 151
Query: 436 DICGPGTKKVHVIFSYKGKNHLIKKISAAKM-MSTHICTL*L*NLTTPMKSSLTMRKLNL 612
DICG TKKVH I + GKNHLIKK K TH+ TL + K S+ +
Sbjct: 152 DICGYATKKVHAILTKNGKNHLIKKDVPCKTDQLTHVYTL---IIRPDAKYSILIDN--- 205
Query: 613 AT*RQTGTSFRLRKSRTLKPRNQKTGMTSPLFQTPKTKKPEDWDKPEHIP 762
T +QTG+ + + P+N++ P+ KKPEDWD E+IP
Sbjct: 206 -TEKQTGSIY--DDWNIIPPKNKR---------DPEAKKPEDWDDNEYIP 243
Score = 124 bits (298), Expect = 1e-28
Identities = 52/97 (53%), Positives = 69/97 (71%), Gaps = 1/97 (1%)
Frame = +3
Query: 504 QKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLPPKKIKDPEAKKPE 683
+KD+ CK D TH+YTLI++PD Y +LIDN + ++G + DW+ +PPK +DPEAKKPE
Sbjct: 175 KKDVPCKTDQLTHVYTLIIRPDAKYSILIDNTEKQTGSIYDDWNIIPPKNKRDPEAKKPE 234
Query: 684 DWDDKPTIPDPEDKEA*GLGQA*TH-SNPDATKPEDW 791
DWDD IPDPEDK+ G ++P+ATKPEDW
Sbjct: 235 DWDDNEYIPDPEDKKPEGYDDIPKEITDPEATKPEDW 271
Score = 45.2 bits (102), Expect = 6e-05
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Frame = +2
Query: 92 DVFFEEKFPDDSWESNWVYSE--HPGKEFGKFKLTAGKFFSDPEDDKGL 232
+VFF+EKF DD WE WV SE G++ T+GK++ D DDKG+
Sbjct: 26 EVFFQEKF-DDGWEDRWVKSEWKKDDNRAGEWNHTSGKWYGD-ADDKGM 72
>07_01_0971 +
8169197-8169311,8170351-8170458,8170533-8170725,
8170811-8171069,8171151-8171207,8171433-8171480,
8171571-8171657,8171743-8171800,8171891-8171958,
8172066-8172161,8172244-8172291,8172658-8172696,
8172782-8172868,8173136-8173147
Length = 424
Score = 128 bits (310), Expect = 4e-30
Identities = 73/170 (42%), Positives = 103/170 (60%), Gaps = 1/170 (0%)
Frame = +1
Query: 256 YALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGP 435
YA+S ++ FSN+ K LV+QF+VKHEQ +DCGGGY+K+ ++QK G+TPY IMFGP
Sbjct: 85 YAISAEYPEFSNKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGDTPYSIMFGP 144
Query: 436 DICGPGTKKVHVIFSYKGKNHLIKK-ISAAKMMSTHICTL*L*NLTTPMKSSLTMRKLNL 612
DICG TKKVH IF+ KNHLIKK + +H+ TL + P ++ T+ N+
Sbjct: 145 DICGYSTKKVHTIFTKNDKNHLIKKDVPCETDQLSHVYTL----IIHP-DATYTILIDNV 199
Query: 613 AT*RQTGTSFRLRKSRTLKPRNQKTGMTSPLFQTPKTKKPEDWDKPEHIP 762
+Q+G+ + + + P Q + P+ KKPEDWD E+IP
Sbjct: 200 E--KQSGSIY---EHWDILPPKQ--------IKDPEAKKPEDWDDKEYIP 236
Score = 127 bits (307), Expect = 9e-30
Identities = 56/97 (57%), Positives = 69/97 (71%), Gaps = 1/97 (1%)
Frame = +3
Query: 504 QKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLPPKKIKDPEAKKPE 683
+KD+ C+ D +H+YTLI+ PD TY +LIDN + +SG + WD LPPK+IKDPEAKKPE
Sbjct: 168 KKDVPCETDQLSHVYTLIIHPDATYTILIDNVEKQSGSIYEHWDILPPKQIKDPEAKKPE 227
Query: 684 DWDDKPTIPDPEDKEA*GLGQA*TH-SNPDATKPEDW 791
DWDDK IPDPEDK+ G +PDA KPEDW
Sbjct: 228 DWDDKEYIPDPEDKKPEGYDDIPKEIPDPDAKKPEDW 264
Score = 56.0 bits (129), Expect = 3e-08
Identities = 30/56 (53%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Frame = +2
Query: 92 DVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDAR 253
+VFF+EKF +D WES WV SE E G++ T+GK+ DPE DKG++TSED R
Sbjct: 30 EVFFQEKF-EDGWESRWVKSEWKKDENMAGEWNHTSGKWNGDPE-DKGIQTSEDYR 83
>01_06_1654 -
38924090-38924101,38924183-38924215,38924737-38924829,
38924909-38924965,38925048-38925143,38925237-38925304,
38925429-38925486,38925572-38925658,38925935-38925982,
38926060-38926116,38926200-38926458,38926666-38926858,
38926991-38927098,38927849-38927957
Length = 425
Score = 116 bits (279), Expect = 2e-26
Identities = 63/171 (36%), Positives = 93/171 (54%), Gaps = 2/171 (1%)
Frame = +1
Query: 256 YALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGP 435
+A+S K FSN+G+ LV+Q+++K EQDI+CGGGY+K+ + QK G+TPY +MFGP
Sbjct: 83 FAISAKIPEFSNKGRTLVLQYSIKFEQDIECGGGYIKLMSGYVNQKKFSGDTPYSLMFGP 142
Query: 436 DICGPGTKKVHVIFSYKGKNHLIKK-ISAAKMMSTHICTL*L*NLTTPMKSSLTMRKLNL 612
DICG TKK+H+I SY+G+N+ IKK + TH+ T L + R+
Sbjct: 143 DICGTQTKKLHLILSYQGQNYPIKKDLQCETDKLTHVYTFIL-RPDASYSILVDNRERES 201
Query: 613 AT*RQTGTSFRLRKSRTLKPRNQKTGMTSPLFQTPKTKKPEDWDK-PEHIP 762
+ RK + + + K + P KPE +D P+ IP
Sbjct: 202 GSMYTDWDILPPRKIKDVHAKKPKDWDDREYIEDPDAVKPEGYDSIPKEIP 252
Score = 105 bits (252), Expect = 4e-23
Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 1/107 (0%)
Frame = +3
Query: 474 LQLQG*EPSHQKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLPPKK 653
L QG +KD++C+ D TH+YT I++PD +Y +L+DN + ESG + DWD LPP+K
Sbjct: 156 LSYQGQNYPIKKDLQCETDKLTHVYTFILRPDASYSILVDNRERESGSMYTDWDILPPRK 215
Query: 654 IKDPEAKKPEDWDDKPTIPDPEDKEA*GLGQA*TH-SNPDATKPEDW 791
IKD AKKP+DWDD+ I DP+ + G +P KP+ W
Sbjct: 216 IKDVHAKKPKDWDDREYIEDPDAVKPEGYDSIPKEIPDPKDKKPDTW 262
Score = 55.6 bits (128), Expect = 4e-08
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Frame = +2
Query: 92 DVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDAR 253
+V FEE+F +D WES WV S+ E G FK TAG++ DP DDKG++T+ DAR
Sbjct: 28 EVIFEERF-EDGWESRWVKSDWKRSEGKAGTFKHTAGRYSGDP-DDKGIQTTLDAR 81
Score = 32.3 bits (70), Expect = 0.45
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +3
Query: 591 DNEKVESGDL--EADWDFLPPKKIKDPEAKKPEDWDD 695
D E +E D +D +P K+I DP+ KKP+ WDD
Sbjct: 229 DREYIEDPDAVKPEGYDSIP-KEIPDPKDKKPDTWDD 264
>05_06_0014 +
24854462-24854570,24854958-24855065,24855240-24855432,
24855892-24856150,24856236-24856292,24856370-24856417,
24856725-24856811,24856885-24856942,24857084-24857151,
24857279-24857374,24857483-24857539,24857906-24857952,
24858184-24858210,24858312-24858504
Length = 468
Score = 111 bits (267), Expect = 6e-25
Identities = 63/171 (36%), Positives = 89/171 (52%), Gaps = 2/171 (1%)
Frame = +1
Query: 256 YALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGP 435
+A+S KF FSN+ + LVVQ+++K EQDI+CGG Y+K+ + QK G+TPY MFGP
Sbjct: 83 FAISAKFPEFSNKNRTLVVQYSIKIEQDIECGGAYIKLMSGYVNQKKFGGDTPYSFMFGP 142
Query: 436 DICGPGTKKVHVIFSYKGKNHLIKK-ISAAKMMSTHICTL*L*NLTTPMKSSLTMRKLNL 612
DICG TKK+H+I SY+G+N+ IKK + TH T L + R+
Sbjct: 143 DICGDQTKKLHLILSYQGQNYPIKKDLKCETDKLTHFYTFIL-RPDASYSLLVDNREREF 201
Query: 613 AT*RQTGTSFRLRKSRTLKPRNQKTGMTSPLFQTPKTKKPEDWDK-PEHIP 762
+ RK + + K + P KPE +D P+ IP
Sbjct: 202 GSMYTDWDILPPRKIKESNAKKPKDWDDREYIEDPDEVKPEGYDSIPKEIP 252
Score = 52.8 bits (121), Expect = 3e-07
Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Frame = +2
Query: 83 INCDVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDAR 253
++ +V FEE+F DD W S WV S+ E G FK TAG + DP DD+G++T+ DA+
Sbjct: 25 VSGEVIFEERF-DDDWGSRWVKSDWKKSEGKAGTFKHTAGSYSGDP-DDRGIQTTSDAK 81
Score = 35.5 bits (78), Expect = 0.049
Identities = 19/34 (55%), Positives = 22/34 (64%), Gaps = 7/34 (20%)
Frame = +3
Query: 645 PKKIKDPEAKKPEDWDD------KP-TIPDPEDK 725
PK+I DP+ KKPE WDD KP IP+PE K
Sbjct: 248 PKEIPDPKDKKPESWDDDDDGVWKPRMIPNPEYK 281
>03_06_0382 - 33530943-33530966,33531160-33531360,33535494-33537026
Length = 585
Score = 75.8 bits (178), Expect = 4e-14
Identities = 32/58 (55%), Positives = 42/58 (72%)
Frame = +3
Query: 504 QKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLPPKKIKDPEAKK 677
+KD+ C+ D TH+YTLI++PD Y +LIDN + +G + D D LPPKK KDPEAKK
Sbjct: 521 KKDVPCETDQLTHVYTLIIRPDAKYSILIDNTEKRTGSIYGDCDNLPPKKKKDPEAKK 578
>04_03_0812 -
19922208-19922357,19922448-19922564,19922681-19922752,
19922864-19923993,19924939-19925008,19925125-19925199
Length = 537
Score = 71.7 bits (168), Expect = 6e-13
Identities = 40/95 (42%), Positives = 56/95 (58%), Gaps = 7/95 (7%)
Frame = +3
Query: 528 DVYTHLYTLIVKPDNTYEVLIDNE-KVESGDLEADWDF----LPPKKIKDPEAKKPEDWD 692
D +H+YT I+KPDN +L+D E K ++ L AD DF +P K I DP+ KKPEDWD
Sbjct: 173 DKLSHVYTAILKPDNEVRILVDGEEKKKANFLSAD-DFEPSLIPSKTIPDPDDKKPEDWD 231
Query: 693 DKPTIPDPEDKEA*GLGQ--A*THSNPDATKPEDW 791
++ IPDP+ + + + +ATKPE W
Sbjct: 232 ERAKIPDPDAVKPDDWDEDAPMEIEDEEATKPEGW 266
Score = 64.9 bits (151), Expect = 7e-11
Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Frame = +1
Query: 244 RCEVYALSRKF-KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVF---DCKLEQKDMHGET 411
+ + YA+ ++ +P + + +V+QF V+ + ++CGG YLK D + K+ ET
Sbjct: 69 KAKKYAIIKELDEPVTLKDGTVVLQFEVRLQNGLECGGAYLKYIRPQDAAWDAKEFDNET 128
Query: 412 PYEIMFGPDICGPGTKKVHVIFSYK 486
PY IMFGPD CG T KVH I +K
Sbjct: 129 PYTIMFGPDKCG-STNKVHFILKHK 152
Score = 43.6 bits (98), Expect = 2e-04
Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Frame = +3
Query: 558 VKPDNTYEVLIDNEKVESGDLEADWDFLPPKKIKDPEAKKPEDWDDK-------PTIPDP 716
VKPD+ E + E W P++I DPEA KPEDWDD+ P I +P
Sbjct: 242 VKPDDWDEDAPMEIEDEEATKPEGWLDDEPEEIDDPEANKPEDWDDEEDGEWEAPKIDNP 301
Query: 717 EDKEA*GLGQ 746
+ +EA G G+
Sbjct: 302 KCEEAPGCGE 311
>10_08_0225 -
15995436-15995555,15995655-15995735,15995813-15995956,
15996305-15996386,15996479-15996561,15996655-15996759,
15996869-15996907,15997004-15997060,15997701-15997769,
15997959-15998069,15998382-15998564
Length = 357
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +3
Query: 579 EVLIDNEKVESGDLEAD-WD-FLPPKKIKDPEAKKPEDWDDKPTIPDPEDKE 728
E+LI E ++ L + WD FLP K K+ + KKP + KP P P ++
Sbjct: 189 ELLIKRELAKNPALANESWDRFLPKFKKKNVKQKKPITKEKKPYTPFPPPQQ 240
>06_03_1142 +
27961999-27962263,27963735-27965080,27965158-27965435,
27965706-27965737,27965830-27966236,27966373-27966858
Length = 937
Score = 29.1 bits (62), Expect = 4.2
Identities = 18/58 (31%), Positives = 33/58 (56%)
Frame = -1
Query: 522 CSGYLFDEMVLTLVTEDYVYLLGSRTTNVRAEHNLIWSLSVHVLLLQFAVKDLEVSAS 349
CSG+L L L+ ++ V ++G +++ + + + + +HV LL FA D +SAS
Sbjct: 80 CSGFLGTIEALQLMEKNVVAVIGPQSSGIGHVISHVVN-ELHVPLLSFAATDPTLSAS 136
>03_02_0177 -
6185091-6185355,6185468-6185524,6185725-6186089,
6186180-6186332,6186422-6186655,6190532-6190978,
6191549-6191652,6192240-6192351
Length = 578
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = -1
Query: 774 WHLDWNVFRLVPILRLLCLRG--LE*WACHPSLLVSW 670
WH ++ L R C+ L W CHP+L+ SW
Sbjct: 75 WHHIHSLLPLQDAARAACVSQAFLRFWRCHPNLIFSW 111
>03_04_0209 + 18581667-18582155
Length = 162
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 7/40 (17%)
Frame = +3
Query: 639 LPPKKIKDPEAKKPED-------WDDKPTIPDPEDKEA*G 737
+P KKI+ P KKP W +KP P P E G
Sbjct: 119 IPAKKIEQPTQKKPSSTPKPRNVWKEKPKTPAPSPPETGG 158
>12_02_0028 -
12437332-12437576,12438436-12438537,12438619-12439009,
12439996-12440532
Length = 424
Score = 28.3 bits (60), Expect = 7.4
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = -2
Query: 596 IVNEDFIGVVRFHNQSVQMCVDI 528
+V EDF+ + F +Q+V +C+D+
Sbjct: 353 LVEEDFVQIAEFLHQAVTICLDV 375
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = -2
Query: 440 MSGPNIISYGVSPCMSFCSSLQSKTLRYPPPQSMSCSCLTVNWTTKGL 297
M GP ++ ++P S +Q + +++ +SC+CL T+KGL
Sbjct: 674 MLGPTVLV--LAPTRELASQIQDEAVKFGRSSRVSCTCL-YGGTSKGL 718
>06_03_1275 +
28903961-28904123,28904225-28904322,28904406-28904550,
28904690-28904814,28904957-28905049,28905297-28905362,
28905459-28905524,28905790-28905870,28905947-28906123,
28906212-28906287,28906394-28906521,28906639-28906950
Length = 509
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -2
Query: 128 TNHQETSPQRIHHNLSKIMPA-S*QRPVQQLSFSIHS 21
TNH E P+ H LSKI+ A S RP+ +S+ +H+
Sbjct: 41 TNHVERPPKERH--LSKIIAAASGARPLADVSYCVHA 75
>03_05_1007 -
29637911-29638333,29640095-29640282,29640688-29640773,
29641108-29641173,29641289-29641331,29641398-29642328
Length = 578
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Frame = +3
Query: 567 DNTYEVLIDNEKVESGDLEADWDFLPPKK----IKDPEAKKPEDWDDKPTIPDPEDKE 728
D+ E+ + E ++E +WD + + A+ PE W D P +PD +D +
Sbjct: 249 DHELELETVRHEEEEEEVEEEWDVIGITEEVLAFATNIARHPETWLDFPLLPDDDDSD 306
>01_01_0588 +
4372877-4372949,4374328-4376262,4376940-4377015,
4378900-4378970,4379038-4379144,4379241-4379711,
4379791-4379976,4380132-4380425,4380820-4381434,
4382219-4382615,4382768-4382850,4383397-4383567,
4384046-4384243,4384754-4385314,4385401-4385460,
4385553-4385869,4385980-4386403,4386539-4387006,
4387093-4387209,4387306-4387427,4387506-4388247,
4388453-4388485,4388625-4388879,4388975-4389160,
4390115-4390453,4391293-4392045
Length = 3017
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 585 LIDNEKVESGDLEADWDFLPPKKIKDPE 668
L DN K+++GDL +W P + PE
Sbjct: 107 LTDNSKLDTGDLHGEWKEWRPTQCSVPE 134
>06_03_1514 +
30696632-30696724,30696857-30697009,30697226-30697309,
30697451-30697569,30697769-30697870,30699071-30699190,
30699285-30699350,30699563-30699629,30699720-30699773,
30700379-30700534,30701130-30701228
Length = 370
Score = 27.9 bits (59), Expect = 9.8
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 14/98 (14%)
Frame = -1
Query: 504 DEMVLTLVTEDYVYLLGSRTTNVRAEHNLIWS-LSVHVLLLQ-----FAVKDLEVSASTV 343
D M + ++Y +L NV HNL WS ++H+L FA + L +
Sbjct: 105 DIMARKFLNQNYTVMLFHYDGNVDGWHNLEWSDKAIHILARNQTKWWFAKRFLHPDVVAI 164
Query: 342 -NVLFMFDSELDYQGF-------TLITERFELTGESID 253
+F++D +L F +++E E+T ++D
Sbjct: 165 YGFIFLWDEDLGVDNFDPRRYLDIMVSEGLEITQPALD 202
>05_01_0421 +
3308692-3309070,3309199-3309339,3309776-3309897,
3310369-3310632,3310719-3310849,3311254-3311461,
3311564-3311632,3311722-3311799,3312448-3312621
Length = 521
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -1
Query: 126 ESSGNFSSKNTSQFIEDNASKLTTTSTTA 40
ES+G SSK + E++ + TTTSTTA
Sbjct: 59 ESAGVSSSKKKRRIEEESPAATTTTSTTA 87
>04_03_0741 +
19187333-19188868,19189264-19189490,19189578-19189899,
19190311-19190399,19190882-19191128,19191756-19191884,
19191967-19192182,19192256-19192379,19192857-19193095
Length = 1042
Score = 27.9 bits (59), Expect = 9.8
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Frame = -1
Query: 459 LGSRTTNVRAEHNLIWSLSVHVL---LLQFAVKDLEV--SASTVNVLFMFDSEL-DY-QG 301
LGS T N+ A+H+ S H+ L +FAV E+ S N L +++++ D+ G
Sbjct: 701 LGSSTANLSADHDTSNLSSPHIAASSLSEFAVLGFELGYSMENPNSLVLWEAQFGDFSNG 760
Query: 300 FTLITERFELTGES 259
+I ++F +GE+
Sbjct: 761 AQVIFDQFLSSGEA 774
>01_06_0480 +
29639124-29639412,29639476-29639552,29639639-29639749,
29639944-29640012,29640650-29640706,29640814-29640852,
29640957-29641061,29641158-29641240,29641333-29641414,
29641760-29641903,29641987-29642067,29642166-29642294
Length = 421
Score = 27.9 bits (59), Expect = 9.8
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +3
Query: 579 EVLIDNEKVESGDLEAD-WD-FLPPKKIKDPEAKKPEDWDDKPTIPDPEDKE 728
E+LI E V++ L + WD FLP K K+ + KKP + K P P ++
Sbjct: 250 ELLIKRELVKNPALAHESWDKFLPKFKKKNVKQKKPLTKEKKQYTPFPPPQQ 301
>01_01_0429 +
3254291-3254435,3254902-3255210,3255286-3256747,
3256950-3257577
Length = 847
Score = 27.9 bits (59), Expect = 9.8
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = -1
Query: 366 LEVSAST-VNVLFMFDSELDYQGFTLITERFELTGESIDLASSEVFKPLSSS-GSLKNFP 193
LE + +T + +L+ + ++Y+G TL+ + T + IDL+ + P+ S G L +
Sbjct: 444 LEHTTNTKIPLLYQDITVVNYKGGTLMFTKILTTFKVIDLSDNSFGGPIPKSLGKLVSLR 503
Query: 192 AVNLNFPNSFPG 157
+NL+ N+F G
Sbjct: 504 GLNLSH-NAFTG 514
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,635,922
Number of Sequences: 37544
Number of extensions: 548183
Number of successful extensions: 1683
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1650
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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