Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30120
(792 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_30637| Best HMM Match : No HMM Matches (HMM E-Value=.) 147 8e-36
SB_49315| Best HMM Match : Calreticulin (HMM E-Value=0) 84 1e-16
SB_29195| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.066
SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8) 34 0.11
SB_40929| Best HMM Match : Attractin (HMM E-Value=5.1) 32 0.46
SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032) 31 0.81
SB_29610| Best HMM Match : Extensin_2 (HMM E-Value=2.3) 31 1.1
SB_14000| Best HMM Match : DUF1213 (HMM E-Value=0.71) 31 1.1
SB_22299| Best HMM Match : Protamine_P2 (HMM E-Value=2.4) 31 1.4
SB_16617| Best HMM Match : Vicilin_N (HMM E-Value=5.5) 31 1.4
SB_50621| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_2342| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_48987| Best HMM Match : Ank (HMM E-Value=2.7e-36) 29 3.3
SB_36607| Best HMM Match : Vicilin_N (HMM E-Value=3.7) 29 3.3
SB_18529| Best HMM Match : DUF1388 (HMM E-Value=3.5) 29 3.3
SB_10791| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_59346| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_27442| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_25279| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_28048| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_5548| Best HMM Match : PT (HMM E-Value=3.1) 29 5.7
SB_5367| Best HMM Match : wnt (HMM E-Value=0) 29 5.7
SB_35625| Best HMM Match : DUF296 (HMM E-Value=0.0053) 28 7.5
SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75) 28 7.5
SB_8802| Best HMM Match : WW (HMM E-Value=3.2e-31) 28 7.5
SB_59557| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_51493| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.00067) 28 7.5
SB_50622| Best HMM Match : Omega-toxin (HMM E-Value=3.1) 28 10.0
SB_26677| Best HMM Match : AT_hook (HMM E-Value=3.1) 28 10.0
>SB_30637| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1137
Score = 147 bits (357), Expect = 8e-36
Identities = 69/102 (67%), Positives = 77/102 (75%), Gaps = 5/102 (4%)
Frame = +3
Query: 501 HQKDIRC-----KDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLPPKKIKDP 665
H+++I C KDD THLYTLIV+PDNTYEV IDNEKVESG+LE DWDFLPPK IKDP
Sbjct: 835 HEQNIDCGGGYAKDDEMTHLYTLIVRPDNTYEVKIDNEKVESGELEKDWDFLPPKTIKDP 894
Query: 666 EAKKPEDWDDKPTIPDPEDKEA*GLGQA*THSNPDATKPEDW 791
EAKKPEDWDDK I DPEDK+ + +PDA KPEDW
Sbjct: 895 EAKKPEDWDDKKMIDDPEDKKPEDWDKPQNIPDPDAKKPEDW 936
Score = 71.3 bits (167), Expect = 8e-13
Identities = 32/53 (60%), Positives = 37/53 (69%)
Frame = +2
Query: 95 VFFEEKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDAR 253
V F EKF D SWE WV S G + GKFK TAGKF+ D E DKG++TSEDA+
Sbjct: 756 VHFLEKFEDKSWEDRWVSSTSKGAQQGKFKWTAGKFYGDAEADKGIQTSEDAK 808
Score = 64.9 bits (151), Expect = 7e-11
Identities = 28/38 (73%), Positives = 33/38 (86%), Gaps = 1/38 (2%)
Frame = +1
Query: 256 YALSRKF-KPFSNEGKPLVVQFTVKHEQDIDCGGGYLK 366
Y +S KF KPF+NEGK LV+QF+VKHEQ+IDCGGGY K
Sbjct: 810 YGISAKFEKPFTNEGKTLVIQFSVKHEQNIDCGGGYAK 847
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/40 (52%), Positives = 25/40 (62%), Gaps = 7/40 (17%)
Frame = +3
Query: 627 DWDFLPPKKIKDPEAKKPEDWDDK-------PTIPDPEDK 725
DWD P+ I DP+AKKPEDWDD+ P I +PE K
Sbjct: 918 DWD--KPQNIPDPDAKKPEDWDDEIDGEWEPPMIDNPEYK 955
>SB_49315| Best HMM Match : Calreticulin (HMM E-Value=0)
Length = 1086
Score = 84.2 bits (199), Expect = 1e-16
Identities = 42/93 (45%), Positives = 56/93 (60%), Gaps = 4/93 (4%)
Frame = +3
Query: 525 DDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADW--DFLPPKKIKDPEAKKPEDWDDK 698
D THL+TL+V+PDNT+EV ID E V G L D PP +I+DP+ K+PEDWD++
Sbjct: 87 DGKKTHLFTLVVRPDNTFEVFIDQESVNKGSLLEDMTPPVNPPAEIEDPDDKRPEDWDER 146
Query: 699 PTIPDPEDKEA*GLGQA*THSNPD--ATKPEDW 791
IPDP+ ++ + PD A KPE W
Sbjct: 147 EKIPDPDAEKPDDWDEDAPVKIPDTNAKKPEGW 179
Score = 49.2 bits (112), Expect = 4e-06
Identities = 40/130 (30%), Positives = 58/130 (44%), Gaps = 1/130 (0%)
Frame = +1
Query: 376 CKLEQKDMHGETPYEIMFGPDICGPGTKKVHVIFSYKG-KNHLIKKISAAKMMSTHICTL 552
C L Q+ +TPY IMFGPD CG +K+H IF +K KN I++ A K +
Sbjct: 28 CHLFQESFGDKTPYTIMFGPDKCGE-DRKLHFIFRHKNPKNGTIEEKHAKKPTGNYNSVF 86
Query: 553 *L*NLTTPMKSSLTMRKLNLAT*RQTGTSFRLRKSRTLKPRNQKTGMTSPLFQTPKTKKP 732
+ +L +R N T + K L+ + + + P K+P
Sbjct: 87 ---DGKKTHLFTLVVRPDN--TFEVFIDQESVNKGSLLEDMTPPVNPPAEI-EDPDDKRP 140
Query: 733 EDWDKPEHIP 762
EDWD+ E IP
Sbjct: 141 EDWDEREKIP 150
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/46 (50%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Frame = +3
Query: 591 DNEKVESGDLEA--DWDFLPPKKIKDPEAKKPEDW-DDKPT-IPDP 716
+ EK+ D E DWD P KI D AKKPE W DD+P +PDP
Sbjct: 145 EREKIPDPDAEKPDDWDEDAPVKIPDTNAKKPEGWLDDEPEYVPDP 190
Score = 30.3 bits (65), Expect = 1.9
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +3
Query: 645 PKKIKDPEAKKPEDWDDK 698
P+ + DP KPEDWDD+
Sbjct: 184 PEYVPDPNGIKPEDWDDE 201
>SB_29195| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 35.1 bits (77), Expect = 0.066
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -2
Query: 353 PPQSMSCSCLTVNWTTKGLPSLLNG 279
P + SC CL V W T GLP L++G
Sbjct: 429 PSEQNSCQCLFVGWQTVGLPQLIHG 453
>SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8)
Length = 360
Score = 34.3 bits (75), Expect = 0.11
Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = +1
Query: 508 KISAAKMMSTHICTL*L*NLTTPMKSSL-TMRKLNLAT*RQTGTSFRLRKSRTLKPRNQK 684
K S + T + T +L T +K+SL T RK +L T +T T L S LK R +
Sbjct: 231 KTSLKTSLKTSLKTSLKASLKTSLKTSLETSRKTSLKTGPKTSTKTSLETS--LKTRLKT 288
Query: 685 TGMTSPLFQTPKTKKPEDWDKPEHIPIQMP 774
+ TSP + K + DKPE P + P
Sbjct: 289 SLKTSPKTSPEISPKDKLEDKPEDRPEEKP 318
>SB_40929| Best HMM Match : Attractin (HMM E-Value=5.1)
Length = 566
Score = 32.3 bits (70), Expect = 0.46
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 622 RQTGTSFRLRKSRTLKPRNQKTGMTSPLFQTPKTKKPEDWDK 747
RQ + KS+T KP+ ++ + KT+KP+D DK
Sbjct: 393 RQASCKTKTSKSKTSKPKEKQAASPRQASRKTKTRKPQDQDK 434
Score = 29.1 bits (62), Expect = 4.3
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = +1
Query: 622 RQTGTSFRLRKSRTLKPRNQKTGMTSPLFQTPKTKKPEDWDKPEHIPIQMPPNLKT 789
RQ + K++T KP++Q + K KP+D DK P Q KT
Sbjct: 44 RQASRKTKTSKTKTSKPQDQDKQDQDKQAASRKRSKPQDQDKKAARPRQASRKTKT 99
>SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032)
Length = 521
Score = 31.5 bits (68), Expect = 0.81
Identities = 22/65 (33%), Positives = 30/65 (46%)
Frame = +3
Query: 594 NEKVESGDLEADWDFLPPKKIKDPEAKKPEDWDDKPTIPDPEDKEA*GLGQA*THSNPDA 773
N + + E + D P KK+ D KPED D+ +PEDK + T P+
Sbjct: 238 NRSLTTNKPEDNADEKPEKKLDDKSEDKPEDNADEKPEDNPEDKP-----EDKTEDRPE- 291
Query: 774 TKPED 788
KPED
Sbjct: 292 DKPED 296
>SB_29610| Best HMM Match : Extensin_2 (HMM E-Value=2.3)
Length = 1353
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +1
Query: 649 RKSRTLKPRNQKTGMTSPLFQTPKTKKPEDWDKPEHIPIQMPPNLKT 789
RK+ T KP++++ + KT KP+D DK P Q KT
Sbjct: 674 RKTNTKKPQDKQAARPRQASRKTKTSKPQDQDKQAARPRQASLKTKT 720
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = +1
Query: 649 RKSRTLKPRNQKTGMTSP--LFQTPKTKKPEDWDKPEHIPIQMPPNLKT 789
RKS+T KP++Q P KT KP+D DK P Q KT
Sbjct: 280 RKSKTSKPQDQDKQAAKPRQASSKNKTSKPQDQDKQAARPSQASRMTKT 328
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +1
Query: 649 RKSRTLKPRNQKTGMTSPLFQTPKT--KKPEDWDKPE 753
RK++T KP++ T P + KT KKP+D DK E
Sbjct: 767 RKTKTSKPQDHGKQATRPRQASHKTRTKKPQDQDKQE 803
Score = 29.1 bits (62), Expect = 4.3
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +1
Query: 649 RKSRTLKPRNQKTGMTSPLFQTPKTK--KPEDWDKPEHIPIQMPPNLKT 789
RKS+ K ++Q P + KTK KPED DK P Q +KT
Sbjct: 214 RKSKASKSKDQGKQGARPRQASSKTKTSKPEDQDKQAARPRQTSRKIKT 262
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1
Query: 643 RLRKSRTLKPRNQKTGMTSPLFQTPKTKKPEDWDKPEHIPIQ 768
R KS+T KP+++ + KT KP+D DK P Q
Sbjct: 630 RKSKSKTSKPQDKNKQAARQASRKTKTSKPQDQDKQAARPRQ 671
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +1
Query: 649 RKSRTLKPRNQKTGMTSPLFQTPKTK--KPEDWDKPE 753
RK++T KP++Q P + KTK KP+D DK +
Sbjct: 146 RKTKTSKPQDQDKQAARPRQASRKTKTSKPQDQDKSQ 182
Score = 27.9 bits (59), Expect = 10.0
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +1
Query: 649 RKSRTLKPRNQKTGMTSPLFQTPKTK--KPEDWDKPE 753
RK++T K +NQ P + KTK KP+D DK E
Sbjct: 368 RKTKTSKLQNQNKQAAIPRQASRKTKTSKPQDQDKQE 404
>SB_14000| Best HMM Match : DUF1213 (HMM E-Value=0.71)
Length = 1281
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 652 KSRTLKPRNQKTGMTSPLFQTPKTK--KPEDWDKPEHIPIQMPPNLKT 789
K++T KP++Q T P + KTK KP+D DK P Q KT
Sbjct: 34 KTKTSKPQDQDKQATRPRQASRKTKTSKPQDQDKQASRPRQASLKTKT 81
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +1
Query: 649 RKSRTLKPRNQKTGMTSPLFQTPKTK--KPEDWDKPEHIPIQMPPNLKT 789
RK++T KP++Q + P + KTK KP+D DK P Q KT
Sbjct: 55 RKTKTSKPQDQDKQASRPRQASLKTKTSKPQDQDKQASRPRQASLKTKT 103
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +1
Query: 649 RKSRTLKPRNQKTGMTSPLFQTPKTK--KPEDWDKPEHIPIQMPPNLKT 789
RK++T KP++Q P + KTK KP+D DK P Q KT
Sbjct: 121 RKTKTSKPQDQDKQAARPRQASRKTKTSKPQDQDKQAARPRQASRKTKT 169
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +1
Query: 649 RKSRTLKPRNQKTGMTSPLFQTPKTKKPEDWDKPEHIPIQMPPNLKT 789
RK++T KP++Q+ T P + KTK + DK P Q KT
Sbjct: 549 RKTKTSKPQDQEKQATRPRQASRKTKTSKPQDKQAARPKQASRKTKT 595
Score = 28.7 bits (61), Expect = 5.7
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 652 KSRTLKPRNQKTGMTSPLFQTPKTK--KPEDWDKPEHIPIQMPPNLKT 789
K++T KP++Q + P + KTK KP+D DK P Q KT
Sbjct: 78 KTKTSKPQDQDKQASRPRQASLKTKTSKPQDQDKQAARPRQANRKTKT 125
Score = 28.7 bits (61), Expect = 5.7
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +1
Query: 652 KSRTLKPRNQKTGMTSPLFQTPKTK--KPEDWDKPEHIPIQMPPNLKT 789
K++T KP++Q P KTK KP+D DK P Q KT
Sbjct: 100 KTKTSKPQDQDKQAARPRQANRKTKTSKPQDQDKQAARPRQASRKTKT 147
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +1
Query: 649 RKSRTLKPRNQKTGMTSPLFQTPKTK--KPEDWDKPE 753
RK++T KP++Q P + KTK KP+D DK +
Sbjct: 143 RKTKTSKPQDQDKQAARPRQASRKTKTSKPQDQDKQD 179
Score = 28.7 bits (61), Expect = 5.7
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +1
Query: 652 KSRTLKPRNQKTGMTSPLFQTPKTK--KPEDWDKPEHIPIQMPPNLKT 789
KS+T KP++Q P + KTK KP+D +K P Q KT
Sbjct: 917 KSKTSKPQDQDKQAARPRQASHKTKRSKPQDQEKQAARPRQASRKTKT 964
>SB_22299| Best HMM Match : Protamine_P2 (HMM E-Value=2.4)
Length = 488
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +1
Query: 649 RKSRTLKPRNQKTGMTSPLFQTPKTK--KPEDWDKPEHIPIQMPPNLKT 789
RK++T KP++Q P + KTK KP+D DK P Q KT
Sbjct: 275 RKTKTSKPQDQDKQAARPRQASRKTKTSKPQDQDKQAARPRQASCETKT 323
>SB_16617| Best HMM Match : Vicilin_N (HMM E-Value=5.5)
Length = 547
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +1
Query: 622 RQTGTSFRLRKSRTLKPRNQKTGMTSPLFQTPKTK--KPEDWDKPEHIPIQMPPNLKT 789
RQ T RK +T KP+ Q P + KT+ KP+D DK P Q KT
Sbjct: 307 RQARTRQASRKKKTRKPQEQAKQAARPRQASRKTRTSKPQDKDKQAARPGQASRKTKT 364
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +1
Query: 649 RKSRTLKPRNQKTGMTSP--LFQTPKTKKPEDWDKPEHIPIQMPPNLKT 789
RK+RT KP+++ P + KT KP+D DK P Q KT
Sbjct: 338 RKTRTSKPQDKDKQAARPGQASRKTKTSKPQDQDKQAARPRQAGRKTKT 386
Score = 28.3 bits (60), Expect = 7.5
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +1
Query: 652 KSRTLKPRNQKTGMTSPLFQTPKTK--KPEDWDK 747
K++T KP++Q T P + KTK KP+D DK
Sbjct: 141 KTKTSKPQDQDKQATRPRQASRKTKTSKPQDQDK 174
>SB_50621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 264
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 643 RLRKSRTLKPRNQKTGMTSPLFQTPKTKKPE 735
R + +T+K QKT ++SP + P TKK E
Sbjct: 88 RYAEQKTVKKEEQKTTISSPCYDFPLTKKLE 118
>SB_2342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 430
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +2
Query: 236 TSEDARSMLSPVSSNRSVMRVNPW*SSSLSNMNKTLTVEADTS 364
T+ DAR M P +S R++P SSS S+ + + + + DT+
Sbjct: 191 TAADAREMADPATSTPWTFRMSPASSSSSSSSSSSSSSQEDTT 233
>SB_48987| Best HMM Match : Ank (HMM E-Value=2.7e-36)
Length = 551
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 510 DIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWD 635
D+ CKDD V D T E L+D+ +V+S L D D
Sbjct: 485 DVSCKDDKNRTALHWAVGQDKTIEGLLDDPRVQSLQLVNDQD 526
>SB_36607| Best HMM Match : Vicilin_N (HMM E-Value=3.7)
Length = 567
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +1
Query: 649 RKSRTLKPRNQKTGMTSPLFQTPKTK--KPEDWDKPE 753
RK++T KP++Q T P + KTK KP++ DK E
Sbjct: 351 RKTKTSKPQDQDKQATRPRQASHKTKPRKPKEKDKQE 387
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +1
Query: 652 KSRTLKPRNQKTGMTSPLFQTPKTKKPEDWDKPEHIPIQMPPNLKT 789
+ +T KP++++ + KT KP+D DK P Q KT
Sbjct: 4 RRKTSKPQDKQAARPRQASRKTKTSKPQDQDKQAARPRQASHKTKT 49
>SB_18529| Best HMM Match : DUF1388 (HMM E-Value=3.5)
Length = 435
Score = 29.5 bits (63), Expect = 3.3
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +1
Query: 583 SSLTMRKLNLAT*RQTGTSFRLRKS-RTLKPRNQKTGMTSPLFQTPKTKKPEDWDKPE 753
S T N T R+T TS + S +T RN KT + K K P+D DKP+
Sbjct: 79 SHKTKTSRNTKTSRKTKTSSNTKTSLKTKTSRNTKTSRNTKTKPQDKNK-PQDQDKPQ 135
>SB_10791| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 510
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 591 DNEKVESGDLEADWDFLPPKKIKDPEAKKPE 683
D++ + GD E + FLPP + E+K PE
Sbjct: 106 DSDNGDKGDSEDEESFLPPSIFDESESKGPE 136
>SB_59346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 684
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -2
Query: 521 AADIFLMRWFLPL*LKITCTFLVPGPQMSGPNIISYGV 408
AAD +RW L +IT +V G + SGP I+ GV
Sbjct: 567 AADFSFVRWVQSLAERITSRVVVEGQKRSGP-IVDLGV 603
>SB_27442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 165
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +3
Query: 597 EKVESGDLEADWD-FLPPKKIKDPEAKKPEDW 689
EKV +G++ ++D LPP++ K PE+ PE +
Sbjct: 48 EKVWTGEVWREFDPLLPPRRQKGPESLDPETY 79
>SB_25279| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 182
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +1
Query: 649 RKSRTLKPRNQKTGMTSPLFQTPKTK--KPEDWDKPEHIPIQ 768
RK++T KP++Q P + KTK KP+D DK P Q
Sbjct: 138 RKTKTSKPQDQDKQAAKPKQASCKTKTSKPKDQDKQAARPRQ 179
>SB_28048| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 125
Score = 28.7 bits (61), Expect = 5.7
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = -3
Query: 157 VLTVHPIAFPRIIRKLLLKEYI 92
+LT H + P++IRK+ LK+Y+
Sbjct: 73 LLTAHLVVAPKLIRKMPLKDYV 94
>SB_5548| Best HMM Match : PT (HMM E-Value=3.1)
Length = 157
Score = 28.7 bits (61), Expect = 5.7
Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Frame = +1
Query: 568 TTPMKSSLTMRKLNLAT*RQTGTSFRLRKSRTLKPR-NQKTG-MTSPLFQTPKT-----K 726
T+P S TMR +L T +T R + R P+ + KT TSP +
Sbjct: 9 TSPKTSQKTMRIKSLKTTPKTSPKTRRKTGRKTSPKTSPKTSPKTSPKTSQKQAGRQAGN 68
Query: 727 KPEDWD--KPEHIPIQMPPNLK 786
KPED KPE P++ P K
Sbjct: 69 KPEDRTEYKPEDKPVEKKPEGK 90
Score = 28.3 bits (60), Expect = 7.5
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +3
Query: 561 KPDNTYEVLIDNEKVESGDLEADWDFLPPKKIKDPEAKKPEDWDDKPTIPDPEDKE 728
KP++ E +++ VE E + P KK +D KPED + PEDK+
Sbjct: 69 KPEDRTEYKPEDKPVEKKP-EGKPENQPEKKPEDKPEDKPEDKPEDKQEDKPEDKQ 123
>SB_5367| Best HMM Match : wnt (HMM E-Value=0)
Length = 367
Score = 28.7 bits (61), Expect = 5.7
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = -1
Query: 615 RQIQLSHCQ*GLHRCCQVSQSECTNVCRHHLCS 517
+++Q + C+ H CC+V C H+C+
Sbjct: 335 KEVQATRCRCKFHWCCKVKCKTCIKNVTTHICN 367
>SB_35625| Best HMM Match : DUF296 (HMM E-Value=0.0053)
Length = 885
Score = 28.3 bits (60), Expect = 7.5
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 6/46 (13%)
Frame = +3
Query: 666 EAKKPEDWDDKPTIPDPEDKEA-----*GLGQA*THSNPDA-TKPE 785
E K ++ D+KP PD ED E GLG T S P+ +PE
Sbjct: 78 EVSKNDNGDNKPDTPDEEDDEVCRKYFEGLGSTPTKSKPEVEIEPE 123
>SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75)
Length = 568
Score = 28.3 bits (60), Expect = 7.5
Identities = 31/116 (26%), Positives = 37/116 (31%)
Frame = +1
Query: 433 PDICGPGTKKVHVIFSYKGKNHLIKKISAAKMMSTHICTL*L*NLTTPMKSSLTMRKLNL 612
P P T K H I + K H K K +T T T + + L
Sbjct: 41 PHTTKPHTTKPHTIKPHTTKPHTTKP-HTTKPHTTKPRTT---KPQTTKPHTTKPHTIKL 96
Query: 613 AT*RQTGTSFRLRKSRTLKPRNQKTGMTSPLFQTPKTKKPEDWDKPEHIPIQMPPN 780
T + T K T KPR K T P P T KP P P P+
Sbjct: 97 YTTKPKTTKPHTNKPYTTKPRTTKPRTTKPHTTKPCTTKPHTTKPPTTKPQTTKPH 152
>SB_8802| Best HMM Match : WW (HMM E-Value=3.2e-31)
Length = 662
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 667 KPRNQKTGMTSPLFQTPKTKKPEDWDKPEHIPIQMPPNL 783
+P QK M PL Q P+ P + P H P +PP +
Sbjct: 329 QPGQQKPIM--PLMQAPQVGPPGNMSMPNHRPQGLPPGM 365
>SB_59557| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1109
Score = 28.3 bits (60), Expect = 7.5
Identities = 18/74 (24%), Positives = 37/74 (50%)
Frame = +3
Query: 492 EPSHQKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLPPKKIKDPEA 671
E + +I+ +++V + + T + + EV +D E ES D ++ P+ +
Sbjct: 508 ETTPDPEIQKQNEVESLVLTELERKQFNTEV-VDVESEESSDTDSSESAEEPEHDDSAQE 566
Query: 672 KKPEDWDDKPTIPD 713
+K E ++KP +PD
Sbjct: 567 EKVEPEEEKPGLPD 580
>SB_51493| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.00067)
Length = 1873
Score = 28.3 bits (60), Expect = 7.5
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +2
Query: 92 DVFFEEKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARSMLSPV 271
+VF + D + + +++ E G G L AG P +G ED+ SM +
Sbjct: 950 EVFTIGQVYDHTTPTAYIFHEWDGDALGGAPLRAGATEVYPRGSRGNTMGEDSSSMYVTL 1009
Query: 272 SSN 280
SSN
Sbjct: 1010 SSN 1012
>SB_50622| Best HMM Match : Omega-toxin (HMM E-Value=3.1)
Length = 320
Score = 27.9 bits (59), Expect = 10.0
Identities = 17/80 (21%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +2
Query: 83 INCDVFFEEKFPDDSWESNWVYSEHPG-KEFGKFKLTAGKFFSDPEDDKGLKTSEDARSM 259
IN ++ +EK P E +W+ + P K++ ++ + S+ + +G ++ E +
Sbjct: 132 INFNITVKEKIPFFQEEEDWIDFQQPAEKDYSGLRIQTLQ-ISEKSEQEGAESCEQEEND 190
Query: 260 LSPVSSNRSVMRVNPW*SSS 319
+ R NPW S +
Sbjct: 191 ENGDGGQRKDKSNNPWQSGT 210
>SB_26677| Best HMM Match : AT_hook (HMM E-Value=3.1)
Length = 355
Score = 27.9 bits (59), Expect = 10.0
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +1
Query: 649 RKSRTLKPRNQKTGMTSPLFQTPKTK--KPEDWDK 747
RK++T KPR+Q P + KTK KP+D +K
Sbjct: 315 RKTKTRKPRDQDKKAARPRQASRKTKISKPQDQNK 349
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,131,864
Number of Sequences: 59808
Number of extensions: 641439
Number of successful extensions: 2099
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2047
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2179815638
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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