Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30120
(792 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin pr... 142 3e-34
AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin ... 142 3e-34
Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical pr... 68 9e-12
U80451-1|AAB37835.1| 591|Caenorhabditis elegans Dnaj domain (pr... 30 1.7
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 29 2.9
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 29 2.9
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 29 2.9
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 29 2.9
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 28 6.7
AL132877-17|CAB60849.2| 269|Caenorhabditis elegans Hypothetical... 28 6.7
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 28 6.7
L10986-9|AAK93847.2| 808|Caenorhabditis elegans Spindle assembl... 28 8.8
AJ539470-1|CAD62434.1| 808|Caenorhabditis elegans SAS-4 protein... 28 8.8
AF039040-2|AAO91670.1| 615|Caenorhabditis elegans Hypothetical ... 28 8.8
AF039040-1|AAB94184.1| 553|Caenorhabditis elegans Hypothetical ... 28 8.8
AF000195-3|AAC24268.1| 689|Caenorhabditis elegans Hmg protein 3... 28 8.8
>X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin
protein.
Length = 395
Score = 142 bits (344), Expect = 3e-34
Identities = 75/171 (43%), Positives = 99/171 (57%), Gaps = 2/171 (1%)
Frame = +1
Query: 256 YALSRKF-KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFG 432
Y+ + KF K FSN+GK LV+Q+TVKHEQ IDCGGGY+KV + D HGETPY +MFG
Sbjct: 70 YSRAAKFDKDFSNKGKTLVIQYTVKHEQGIDCGGGYVKVMRADADLGDFHGETPYNVMFG 129
Query: 433 PDICGPGTKKVHVIFSYKGKNHLIKK-ISAAKMMSTHICTL*L*NLTTPMKSSLTMRKLN 609
PDICGP T++VHVI +YKG+N LIKK I+ TH+ TL L N + +
Sbjct: 130 PDICGP-TRRVHVILNYKGENKLIKKEITCKSDELTHLYTLIL-NSDNTYEVKIDGESAQ 187
Query: 610 LAT*RQTGTSFRLRKSRTLKPRNQKTGMTSPLFQTPKTKKPEDWDKPEHIP 762
+ + +K + + + + KPEDW+KPEHIP
Sbjct: 188 TGSLEEDWDLLPAKKIKDPDAKKPEDWDEREYIDDAEDAKPEDWEKPEHIP 238
Score = 122 bits (295), Expect = 2e-28
Identities = 55/96 (57%), Positives = 66/96 (68%)
Frame = +3
Query: 504 QKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLPPKKIKDPEAKKPE 683
+K+I CK D THLYTLI+ DNTYEV ID E ++G LE DWD LP KKIKDP+AKKPE
Sbjct: 153 KKEITCKSDELTHLYTLILNSDNTYEVKIDGESAQTGSLEEDWDLLPAKKIKDPDAKKPE 212
Query: 684 DWDDKPTIPDPEDKEA*GLGQA*THSNPDATKPEDW 791
DWD++ I D ED + + +PDA KPEDW
Sbjct: 213 DWDEREYIDDAEDAKPEDWEKPEHIPDPDAKKPEDW 248
Score = 67.3 bits (157), Expect = 1e-11
Identities = 28/57 (49%), Positives = 42/57 (73%)
Frame = +2
Query: 83 INCDVFFEEKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDAR 253
++ +V+F+E+F D SWE WV S+H +FG FKL+AGKFF D+G++TS+DA+
Sbjct: 13 VSAEVYFKEEFNDASWEKRWVQSKHKD-DFGAFKLSAGKFFDVESRDQGIQTSQDAK 68
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/40 (50%), Positives = 25/40 (62%), Gaps = 7/40 (17%)
Frame = +3
Query: 627 DWDFLPPKKIKDPEAKKPEDWDDK-------PTIPDPEDK 725
DW+ P+ I DP+AKKPEDWDD+ P I +PE K
Sbjct: 230 DWE--KPEHIPDPDAKKPEDWDDEMDGEWEPPMIDNPEYK 267
>AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin
protein 1 protein.
Length = 395
Score = 142 bits (344), Expect = 3e-34
Identities = 75/171 (43%), Positives = 99/171 (57%), Gaps = 2/171 (1%)
Frame = +1
Query: 256 YALSRKF-KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFG 432
Y+ + KF K FSN+GK LV+Q+TVKHEQ IDCGGGY+KV + D HGETPY +MFG
Sbjct: 70 YSRAAKFDKDFSNKGKTLVIQYTVKHEQGIDCGGGYVKVMRADADLGDFHGETPYNVMFG 129
Query: 433 PDICGPGTKKVHVIFSYKGKNHLIKK-ISAAKMMSTHICTL*L*NLTTPMKSSLTMRKLN 609
PDICGP T++VHVI +YKG+N LIKK I+ TH+ TL L N + +
Sbjct: 130 PDICGP-TRRVHVILNYKGENKLIKKEITCKSDELTHLYTLIL-NSDNTYEVKIDGESAQ 187
Query: 610 LAT*RQTGTSFRLRKSRTLKPRNQKTGMTSPLFQTPKTKKPEDWDKPEHIP 762
+ + +K + + + + KPEDW+KPEHIP
Sbjct: 188 TGSLEEDWDLLPAKKIKDPDAKKPEDWDEREYIDDAEDAKPEDWEKPEHIP 238
Score = 122 bits (295), Expect = 2e-28
Identities = 55/96 (57%), Positives = 66/96 (68%)
Frame = +3
Query: 504 QKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLPPKKIKDPEAKKPE 683
+K+I CK D THLYTLI+ DNTYEV ID E ++G LE DWD LP KKIKDP+AKKPE
Sbjct: 153 KKEITCKSDELTHLYTLILNSDNTYEVKIDGESAQTGSLEEDWDLLPAKKIKDPDAKKPE 212
Query: 684 DWDDKPTIPDPEDKEA*GLGQA*THSNPDATKPEDW 791
DWD++ I D ED + + +PDA KPEDW
Sbjct: 213 DWDEREYIDDAEDAKPEDWEKPEHIPDPDAKKPEDW 248
Score = 67.3 bits (157), Expect = 1e-11
Identities = 28/57 (49%), Positives = 42/57 (73%)
Frame = +2
Query: 83 INCDVFFEEKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDAR 253
++ +V+F+E+F D SWE WV S+H +FG FKL+AGKFF D+G++TS+DA+
Sbjct: 13 VSAEVYFKEEFNDASWEKRWVQSKHKD-DFGAFKLSAGKFFDVESRDQGIQTSQDAK 68
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/40 (50%), Positives = 25/40 (62%), Gaps = 7/40 (17%)
Frame = +3
Query: 627 DWDFLPPKKIKDPEAKKPEDWDDK-------PTIPDPEDK 725
DW+ P+ I DP+AKKPEDWDD+ P I +PE K
Sbjct: 230 DWE--KPEHIPDPDAKKPEDWDDEMDGEWEPPMIDNPEYK 267
>Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical
protein ZK632.6 protein.
Length = 619
Score = 67.7 bits (158), Expect = 9e-12
Identities = 34/80 (42%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Frame = +1
Query: 256 YALSRKFK-PFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFD--CKLEQKDMHGETPYEIM 426
+A++ K PF+ + VVQ+ +K E+ +CGGGYLK+ + + + +T Y IM
Sbjct: 121 HAIAAKLNTPFAFDANTFVVQYDIKFEEGQECGGGYLKLLSEGAEKDLANFQDKTAYTIM 180
Query: 427 FGPDICGPGTKKVHVIFSYK 486
FGPD CG T KVH+IF YK
Sbjct: 181 FGPDKCG-ATGKVHLIFRYK 199
Score = 60.9 bits (141), Expect = 1e-09
Identities = 35/93 (37%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
Frame = +3
Query: 525 DDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWD--FLPPKKIKDPEAKKPEDWDDK 698
DD THL+TL+VKP Y V +D + + G++ +D PPK+I D KP DWD++
Sbjct: 223 DDHNTHLFTLVVKPTGEYSVSVDGKSLYYGNMMSDVTPALTPPKQIFDETDLKPVDWDER 282
Query: 699 PTIPDPEDKEA*GLGQA*THSNPD--ATKPEDW 791
I D + + S D ATKP DW
Sbjct: 283 ENIEDESAVKPDDWDENEPQSVVDEAATKPYDW 315
Score = 38.7 bits (86), Expect = 0.005
Identities = 29/79 (36%), Positives = 38/79 (48%), Gaps = 9/79 (11%)
Frame = +3
Query: 558 VKPDNTYEVLIDNEKVESGDLEADWDFLPPKKIKDPEAKKPEDWD-------DKPTIPDP 716
VKPD+ E + E+ DW+ + I DPEAKKP+DWD + P I +P
Sbjct: 291 VKPDDWDENEPQSVVDEAATKPYDWNEEENELIADPEAKKPQDWDEDMDGSWEAPLIDNP 350
Query: 717 EDKEA*GLG--QA*THSNP 767
K G G +A T NP
Sbjct: 351 ACKGLSGCGTWKAPTIKNP 369
Score = 35.5 bits (78), Expect = 0.044
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 591 DNEKVESGDLEADWDFLPPKKIKDPEAKKPEDWDDKPT--IPDPEDKE 728
+N + ES DWD P+ + D A KP DW+++ I DPE K+
Sbjct: 283 ENIEDESAVKPDDWDENEPQSVVDEAATKPYDWNEEENELIADPEAKK 330
>U80451-1|AAB37835.1| 591|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 9 protein.
Length = 591
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = -1
Query: 285 ERFELTGESIDLASSEVFKPLSSSGSLKNFPAVNLNFPNSFPGCSLYTQ 139
E +T S+ L + V +S L + ++ +F SFP C LYT+
Sbjct: 349 ENDSITEMSVQLTTYGVNPAISMDRRLSRYSRISCSFHFSFPSCLLYTK 397
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 648 KKIKDPEAKKPEDWDDKPTIPDPEDK 725
+++K P+ K PE DDKP P ++K
Sbjct: 1614 EELKSPKEKSPEKADDKPKSPTKKEK 1639
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 648 KKIKDPEAKKPEDWDDKPTIPDPEDK 725
+++K P+ K PE DDKP P ++K
Sbjct: 1614 EELKSPKEKSPEKADDKPKSPTKKEK 1639
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 648 KKIKDPEAKKPEDWDDKPTIPDPEDK 725
+++K P+ K PE DDKP P ++K
Sbjct: 1614 EELKSPKEKSPEKADDKPKSPTKKEK 1639
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 648 KKIKDPEAKKPEDWDDKPTIPDPEDK 725
+++K P+ K PE DDKP P ++K
Sbjct: 1614 EELKSPKEKSPEKADDKPKSPTKKEK 1639
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = +1
Query: 643 RLRKSRTLKPRNQKTGMTSPLFQTPKTKKPEDWDKPEHIPIQMPP 777
R RT+ PR + P + PKT+ P P+ +PP
Sbjct: 557 RTEPPRTIPPRTEAPRTEPPRTEPPKTEAPRTVRPKTEAPMTVPP 601
>AL132877-17|CAB60849.2| 269|Caenorhabditis elegans Hypothetical
protein Y105E8B.7 protein.
Length = 269
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 534 YTHLYTLIVKPDN-TYEVLIDNEKVESGDLEADWDFLPP 647
+TH +TL VKP N Y+ DN+ ++ E F P
Sbjct: 23 HTHKWTLFVKPGNRDYDEFPDNKLIQKVKFEIHESFAQP 61
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of
efl-1 mutant phenotypeprotein 1 protein.
Length = 4177
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/66 (22%), Positives = 30/66 (45%)
Frame = +3
Query: 528 DVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLPPKKIKDPEAKKPEDWDDKPTI 707
D++T + K +N E+ ++ E + + F+ P ++PE DD+
Sbjct: 445 DLFTTIDVTSFKANNGMEICVNRVVHEINECRKEQPFMIDISYDMPFEEEPEPRDDQEAH 504
Query: 708 PDPEDK 725
+PED+
Sbjct: 505 EEPEDE 510
>L10986-9|AAK93847.2| 808|Caenorhabditis elegans Spindle assembly
abnormal protein 4 protein.
Length = 808
Score = 27.9 bits (59), Expect = 8.8
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Frame = +1
Query: 562 NLTTPMKSSLTMRKLN--LAT*RQTGTSFRLRKSR-TLKPRNQKTGMTSPLFQTPKTKKP 732
+L TP L ++N + + QTG S R T+ ++ M + Q P+
Sbjct: 234 SLETPQARPLGSNRINQLVRSEAQTGISLLQHHERPTVTAPLRRNDMMNSSRQNPQNGNV 293
Query: 733 EDWDKPEHI---PIQMP 774
+D ++PEH+ PI +P
Sbjct: 294 QDENRPEHVYDQPIHVP 310
>AJ539470-1|CAD62434.1| 808|Caenorhabditis elegans SAS-4 protein
protein.
Length = 808
Score = 27.9 bits (59), Expect = 8.8
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Frame = +1
Query: 562 NLTTPMKSSLTMRKLN--LAT*RQTGTSFRLRKSR-TLKPRNQKTGMTSPLFQTPKTKKP 732
+L TP L ++N + + QTG S R T+ ++ M + Q P+
Sbjct: 234 SLETPQARPLGSNRINQLVRSEAQTGISLLQHHERPTVTAPLRRNDMMNSSRQNPQNGNV 293
Query: 733 EDWDKPEHI---PIQMP 774
+D ++PEH+ PI +P
Sbjct: 294 QDENRPEHVYDQPIHVP 310
>AF039040-2|AAO91670.1| 615|Caenorhabditis elegans Hypothetical
protein T22B11.4b protein.
Length = 615
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +3
Query: 573 TYEVLIDNEKVESGDLEADWDFLPPKKIKDPEAKKPEDWDDKPTIPDPEDKE 728
T V+ ++E+ + GD E D + K K+ E ++ +D DD+ T ED E
Sbjct: 396 TTTVVKEDEEKKEGDNEGDKEEDKEDK-KESEEEEEKDGDDEETTTTSEDDE 446
>AF039040-1|AAB94184.1| 553|Caenorhabditis elegans Hypothetical
protein T22B11.4a protein.
Length = 553
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +3
Query: 573 TYEVLIDNEKVESGDLEADWDFLPPKKIKDPEAKKPEDWDDKPTIPDPEDKE 728
T V+ ++E+ + GD E D + K K+ E ++ +D DD+ T ED E
Sbjct: 396 TTTVVKEDEEKKEGDNEGDKEEDKEDK-KESEEEEEKDGDDEETTTTSEDDE 446
>AF000195-3|AAC24268.1| 689|Caenorhabditis elegans Hmg protein 3
protein.
Length = 689
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/47 (25%), Positives = 25/47 (53%)
Frame = +3
Query: 561 KPDNTYEVLIDNEKVESGDLEADWDFLPPKKIKDPEAKKPEDWDDKP 701
+PD+ Y+ + + +G+ + D + + PKK + E K + +KP
Sbjct: 497 EPDDEYDSGSEKDASGTGESDPDEENIEPKKKESKEKKNKREKKEKP 543
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,195,572
Number of Sequences: 27780
Number of extensions: 480559
Number of successful extensions: 1687
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1663
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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