Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30120
(792 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g56340.1 68414.m06476 calreticulin 1 (CRT1) identical to calr... 130 8e-31
At1g09210.1 68414.m01028 calreticulin 2 (CRT2) identical to SP|Q... 127 7e-30
At1g08450.1 68414.m00934 calreticulin 3 (CRT3) identical to simi... 112 2e-25
At1g08450.2 68414.m00935 calreticulin 3 (CRT3) identical to simi... 80 2e-15
At5g07340.1 68418.m00838 calnexin, putative identical to calnexi... 73 3e-13
At5g61790.1 68418.m07754 calnexin 1 (CNX1) identical to calnexin... 72 4e-13
At5g56820.1 68418.m07090 F-box family protein contains F-box dom... 33 0.16
At5g55810.1 68418.m06955 nicotinamide-nucleotide adenylyltransfe... 32 0.38
At1g74170.1 68414.m08590 leucine-rich repeat family protein cont... 31 0.88
At3g14670.1 68416.m01856 hypothetical protein 31 1.2
At1g74190.1 68414.m08592 leucine-rich repeat family protein cont... 30 1.5
At2g15695.1 68415.m01797 expressed protein contains Pfam PF05705... 30 2.0
At1g60890.1 68414.m06855 phosphatidylinositol-4-phosphate 5-kina... 29 3.5
At3g27740.1 68416.m03463 carbamoyl-phosphate synthase [glutamine... 29 4.7
At3g02885.1 68416.m00283 gibberellin-regulated protein 5 (GASA5)... 29 4.7
At5g22690.1 68418.m02651 disease resistance protein (TIR-NBS-LRR... 28 6.2
At5g08420.1 68418.m00992 expressed protein 28 6.2
At3g31540.1 68416.m04025 hypothetical protein 28 6.2
At1g67180.1 68414.m07642 zinc finger (C3HC4-type RING finger) fa... 28 6.2
At5g35210.2 68418.m04175 peptidase M50 family protein / sterol-r... 28 8.2
At5g35210.1 68418.m04174 peptidase M50 family protein / sterol-r... 28 8.2
At4g18570.1 68417.m02749 proline-rich family protein common fami... 28 8.2
>At1g56340.1 68414.m06476 calreticulin 1 (CRT1) identical to
calreticulin (crt1) GI:2052379 [Arabidopsis thaliana]
Length = 425
Score = 130 bits (315), Expect = 8e-31
Identities = 80/198 (40%), Positives = 102/198 (51%), Gaps = 1/198 (0%)
Frame = +1
Query: 172 WKV*IDCWKVLQRPRG*QRFENL*RCEVYALSRKFKPFSNEGKPLVVQFTVKHEQDIDCG 351
WK W +G Q E+ YA+S +F FSN+ K LV QF+VKHEQ +DCG
Sbjct: 53 WKHTAGNWSGDANDKGIQTSEDY---RFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCG 109
Query: 352 GGYLKVFDCKLEQKDMHGETPYEIMFGPDICGPGTKKVHVIFSYKGKNHLIKK-ISAAKM 528
GGY+K+ ++Q G+TPY IMFGPDICG TKKVH I +Y G NHLIKK +
Sbjct: 110 GGYMKLLSDDVDQTKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNHLIKKEVPCETD 169
Query: 529 MSTHICTL*L*NLTTPMKSSLTMRKLNLAT*RQTGTSFRLRKSRTLKPRNQKTGMTSPLF 708
TH+ T ++ T L +QTG+ L L P +
Sbjct: 170 QLTHVYTF-------VLRPDATYSILIDNVEKQTGS---LYSDWDLLPAKK--------I 211
Query: 709 QTPKTKKPEDWDKPEHIP 762
+ P KKPEDWD E+IP
Sbjct: 212 KDPSAKKPEDWDDKEYIP 229
Score = 120 bits (289), Expect = 1e-27
Identities = 52/97 (53%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
Frame = +3
Query: 504 QKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLPPKKIKDPEAKKPE 683
+K++ C+ D TH+YT +++PD TY +LIDN + ++G L +DWD LP KKIKDP AKKPE
Sbjct: 161 KKEVPCETDQLTHVYTFVLRPDATYSILIDNVEKQTGSLYSDWDLLPAKKIKDPSAKKPE 220
Query: 684 DWDDKPTIPDPEDKEA*GLGQA*TH-SNPDATKPEDW 791
DWDDK IPDPED + G + DA KPEDW
Sbjct: 221 DWDDKEYIPDPEDTKPAGYDDIPKEIPDTDAKKPEDW 257
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Frame = +2
Query: 83 INCDVFFEEKFPDDSWESNWVYSE--HPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDAR 253
++ +V FEEKF +D WE WV S+ G++K TAG + D +DKG++TSED R
Sbjct: 20 VSAEVIFEEKF-EDGWEKRWVKSDWKKDDNTAGEWKHTAGNWSGD-ANDKGIQTSEDYR 76
>At1g09210.1 68414.m01028 calreticulin 2 (CRT2) identical to
SP|Q38858 Calreticulin 2 precursor {Arabidopsis
thaliana}
Length = 424
Score = 127 bits (307), Expect = 7e-30
Identities = 80/197 (40%), Positives = 102/197 (51%), Gaps = 1/197 (0%)
Frame = +1
Query: 172 WKV*IDCWKVLQRPRG*QRFENL*RCEVYALSRKFKPFSNEGKPLVVQFTVKHEQDIDCG 351
WK W +G Q E+ YA+S +F FSN+ K LV QF+VKHEQ +DCG
Sbjct: 53 WKHTAGNWSGDANDKGIQTSEDY---RFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCG 109
Query: 352 GGYLKVFDCKLEQKDMHGETPYEIMFGPDICGPGTKKVHVIFSYKGKNHLIKK-ISAAKM 528
GGY+K+ ++QK G+TPY IMFGPDICG TKKVH I +Y NHLIKK +
Sbjct: 110 GGYMKLLSGDVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNEANHLIKKDVPCETD 169
Query: 529 MSTHICTL*L*NLTTPMKSSLTMRKLNLAT*RQTGTSFRLRKSRTLKPRNQKTGMTSPLF 708
TH+ T L + T L +QTG+ L L P +
Sbjct: 170 QLTHVYTFIL-------RPDATYSILIDNVEKQTGS---LYSDWDLLPPKK--------I 211
Query: 709 QTPKTKKPEDWDKPEHI 759
+ P KKPEDWD+ E+I
Sbjct: 212 KDPSAKKPEDWDEQEYI 228
Score = 120 bits (289), Expect = 1e-27
Identities = 52/97 (53%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
Frame = +3
Query: 504 QKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLPPKKIKDPEAKKPE 683
+KD+ C+ D TH+YT I++PD TY +LIDN + ++G L +DWD LPPKKIKDP AKKPE
Sbjct: 161 KKDVPCETDQLTHVYTFILRPDATYSILIDNVEKQTGSLYSDWDLLPPKKIKDPSAKKPE 220
Query: 684 DWDDKPTIPDPEDKEA*GLGQA*TH-SNPDATKPEDW 791
DWD++ I DPEDK+ G + D+ KPEDW
Sbjct: 221 DWDEQEYISDPEDKKPDGYDDIPKEIPDTDSKKPEDW 257
Score = 48.8 bits (111), Expect = 4e-06
Identities = 27/55 (49%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Frame = +2
Query: 95 VFFEEKFPDDSWESNWVYSE--HPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDAR 253
V FEE+F DD WE+ WV SE G++K TAG + D +DKG++TSED R
Sbjct: 24 VIFEERF-DDGWENRWVKSEWKKDDNTAGEWKHTAGNWSGD-ANDKGIQTSEDYR 76
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/32 (56%), Positives = 23/32 (71%), Gaps = 7/32 (21%)
Frame = +3
Query: 645 PKKIKDPEAKKPEDWDDK-------PTIPDPE 719
PK+I D ++KKPEDWDD+ PTIP+PE
Sbjct: 243 PKEIPDTDSKKPEDWDDEEDGEWTAPTIPNPE 274
>At1g08450.1 68414.m00934 calreticulin 3 (CRT3) identical to similar
to SP|O04153 Calreticulin 3 precursor {Arabidopsis
thaliana}
Length = 424
Score = 112 bits (270), Expect = 2e-25
Identities = 49/85 (57%), Positives = 64/85 (75%)
Frame = +1
Query: 256 YALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGP 435
YA+S K FSN+ + LVVQ++VK EQDI+CGG Y+K+ + QK G+TPY +MFGP
Sbjct: 84 YAISAKIPEFSNKNRTLVVQYSVKIEQDIECGGAYIKLLSGYVNQKQFGGDTPYSLMFGP 143
Query: 436 DICGPGTKKVHVIFSYKGKNHLIKK 510
DICG TKK+HVI SY+G+N+ IKK
Sbjct: 144 DICGTQTKKLHVIVSYQGQNYPIKK 168
Score = 104 bits (249), Expect = 8e-23
Identities = 47/98 (47%), Positives = 62/98 (63%), Gaps = 2/98 (2%)
Frame = +3
Query: 504 QKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLPPKKIKDPEAKKPE 683
+KD++C+ D H YT I++PD +Y VL+DN++ E G + DWD LPP+KIK AKKPE
Sbjct: 167 KKDLQCETDKLNHFYTFILRPDASYSVLVDNKEREFGSMYTDWDILPPRKIKVKNAKKPE 226
Query: 684 DWDDKPTIPDPEDKEA*GLGQA*THSNPD--ATKPEDW 791
DWDD+ I DP D + G PD A +PEDW
Sbjct: 227 DWDDREYIDDPNDVKPEGFDSI-PREIPDRKAKEPEDW 263
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Frame = +2
Query: 92 DVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDAR 253
++F EE F + W+S WV S+ E G FK TAGK+ DP D+KG++T DA+
Sbjct: 29 EIFLEEHF-EGGWKSRWVLSDWKRNEGKAGTFKHTAGKWPGDP-DNKGIQTYNDAK 82
Score = 30.7 bits (66), Expect = 1.2
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +3
Query: 645 PKKIKDPEAKKPEDWDDK 698
P++I D +AK+PEDWD++
Sbjct: 249 PREIPDRKAKEPEDWDEE 266
>At1g08450.2 68414.m00935 calreticulin 3 (CRT3) identical to similar
to SP|O04153 Calreticulin 3 precursor {Arabidopsis
thaliana}
Length = 370
Score = 79.8 bits (188), Expect = 2e-15
Identities = 38/77 (49%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Frame = +3
Query: 567 DNTYEVLIDNEKVESGDLEADWDFLPPKKIKDPEAKKPEDWDDKPTIPDPEDKEA*GLGQ 746
D Y VL+DN++ E G + DWD LPP+KIK AKKPEDWDD+ I DP D + G
Sbjct: 134 DTPYSVLVDNKEREFGSMYTDWDILPPRKIKVKNAKKPEDWDDREYIDDPNDVKPEGFDS 193
Query: 747 A*THSNPD--ATKPEDW 791
PD A +PEDW
Sbjct: 194 I-PREIPDRKAKEPEDW 209
Score = 67.7 bits (158), Expect = 8e-12
Identities = 28/57 (49%), Positives = 40/57 (70%)
Frame = +1
Query: 256 YALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIM 426
YA+S K FSN+ + LVVQ++VK EQDI+CGG Y+K+ + QK G+TPY ++
Sbjct: 84 YAISAKIPEFSNKNRTLVVQYSVKIEQDIECGGAYIKLLSGYVNQKQFGGDTPYSVL 140
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Frame = +2
Query: 92 DVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDAR 253
++F EE F + W+S WV S+ E G FK TAGK+ DP D+KG++T DA+
Sbjct: 29 EIFLEEHF-EGGWKSRWVLSDWKRNEGKAGTFKHTAGKWPGDP-DNKGIQTYNDAK 82
Score = 30.7 bits (66), Expect = 1.2
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +3
Query: 645 PKKIKDPEAKKPEDWDDK 698
P++I D +AK+PEDWD++
Sbjct: 195 PREIPDRKAKEPEDWDEE 212
>At5g07340.1 68418.m00838 calnexin, putative identical to calnexin
homolog 2 from Arabidopsis thaliana [SP|Q38798], strong
similarity to calnexin homolog 1, Arabidopsis thaliana,
EMBL:AT08315 [SP|P29402]; contains Pfam profile PF00262
calreticulin family
Length = 532
Score = 72.5 bits (170), Expect = 3e-13
Identities = 32/67 (47%), Positives = 45/67 (67%), Gaps = 4/67 (5%)
Frame = +3
Query: 528 DVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLPP----KKIKDPEAKKPEDWDD 695
D+ +H+YT ++K DN +L+D E+ + G+L + DF PP K I DPE KKPEDWD+
Sbjct: 179 DMLSHVYTAVLKSDNEVRILVDGEEKKKGNLLSAEDFEPPLIPSKTIPDPEDKKPEDWDE 238
Query: 696 KPTIPDP 716
+ IPDP
Sbjct: 239 RAKIPDP 245
Score = 60.5 bits (140), Expect = 1e-09
Identities = 51/168 (30%), Positives = 77/168 (45%), Gaps = 10/168 (5%)
Frame = +1
Query: 289 NEGKPLVVQFTVKHEQDIDCGGGYLKVF---DCKLEQKDMHGETPYEIMFGPDICGPGTK 459
NEG +V+Q+ + ++ ++CGG YLK + + ++PY IMFGPD CG T
Sbjct: 92 NEGT-VVLQYEARFQEGLECGGAYLKYLRPQEAGWVPQGFDNDSPYSIMFGPDKCG-ATN 149
Query: 460 KVHVIFSYKG-------KNHLIKKISAAKMMSTHICTL*L*NLTTPMKSSLTMRKLNLAT 618
KVH I +K ++HL S M +H+ T +KS +R L
Sbjct: 150 KVHFILKHKNPKSGEFVEHHLKFPPSVPFDMLSHV-------YTAVLKSDNEVRILVDGE 202
Query: 619 *RQTGTSFRLRKSRTLKPRNQKTGMTSPLFQTPKTKKPEDWDKPEHIP 762
++ G L + +P + S P+ KKPEDWD+ IP
Sbjct: 203 EKKKG---NLLSAEDFEP----PLIPSKTIPDPEDKKPEDWDERAKIP 243
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +3
Query: 558 VKPDNTYEVLIDNEKVESGDLEADWDFLPPKKIKDPEAKKPEDWDDK 698
VKPD+ E + E + W P +++DPEA KPEDWDD+
Sbjct: 248 VKPDDWDEDAPMEIEDEEAEKPEGWLDDEPVEVEDPEASKPEDWDDE 294
>At5g61790.1 68418.m07754 calnexin 1 (CNX1) identical to calnexin
homolog 1, Arabidopsis thaliana, EMBL:AT08315
[SP|P29402]
Length = 530
Score = 72.1 bits (169), Expect = 4e-13
Identities = 38/94 (40%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Frame = +3
Query: 528 DVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDF----LPPKKIKDPEAKKPEDWDD 695
D +H+YT I+KPDN +L+D E+ + +L + DF +P K I DPE KKPEDWD+
Sbjct: 177 DKLSHVYTAILKPDNEVRILVDGEEKKKANLLSGEDFEPALIPAKTIPDPEDKKPEDWDE 236
Query: 696 KPTIPDPE--DKEA*GLGQA*THSNPDATKPEDW 791
+ IPDP E + +A KPE W
Sbjct: 237 RAKIPDPNAVKPEDWDEDAPMEIEDEEAEKPEGW 270
Score = 58.8 bits (136), Expect = 4e-09
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Frame = +1
Query: 277 KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVF---DCKLEQKDMHGETPYEIMFGPDICG 447
+P + + +V+Q+ V+ ++ ++CGG YLK + + E+PY IMFGPD CG
Sbjct: 85 EPLNLKEGTVVLQYEVRFQEGLECGGAYLKYLRPQEAGWTPQGFDSESPYSIMFGPDKCG 144
Query: 448 PGTKKVHVIFSYK 486
GT KVH I +K
Sbjct: 145 -GTNKVHFILKHK 156
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Frame = +3
Query: 558 VKPDNTYEVLIDNEKVESGDLEADWDFLPPKKIKDPEAKKPEDWDDK-------PTIPDP 716
VKP++ E + E + W P+++ DPEA KPEDWDD+ P I +P
Sbjct: 246 VKPEDWDEDAPMEIEDEEAEKPEGWLDDEPEEVDDPEATKPEDWDDEEDGMWEAPKIDNP 305
Query: 717 EDKEA*GLGQ 746
+ + A G G+
Sbjct: 306 KCEAAPGCGE 315
>At5g56820.1 68418.m07090 F-box family protein contains F-box domain
Pfam:PF00646
Length = 435
Score = 33.5 bits (73), Expect = 0.16
Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = -1
Query: 210 SLKNFPAVNLNFPNSFPGC-SLYTQLLSHES-SGNFSSKNTSQFIEDNASKLTTTSTTAF 37
S+K+ P +++ PNS P C + + + L + +G K + +I NA +L T + + +
Sbjct: 332 SIKDQPNISVRKPNSVPECLTFHLETLEWQGYAGRPEDKEIAVYILGNALRLNTATISRY 391
Query: 36 IFDSQYHLLQQK 1
S++ Q+K
Sbjct: 392 FSSSRFRHHQKK 403
>At5g55810.1 68418.m06955 nicotinamide-nucleotide
adenylyltransferase, putative / NAD(+)
pyrophosphorylase, putative similar to nicotinamide
mononucleotide adenylyl transferase [Homo sapiens]
GI:11245478; contains Pfam profile PF01467:
Cytidylyltransferase
Length = 238
Score = 32.3 bits (70), Expect = 0.38
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +2
Query: 206 SDPEDDKGLKTSEDARSMLSPVSSNRSVMRVNPW*SSSLSNMNKTLTVEADTSRSLTANW 385
+D KGL ++E M + + + V+PW +S SN +TLTV + LT N
Sbjct: 64 NDAYKKKGLLSAEHRLEMCNVSCQSSDFVMVDPW-EASQSNYQRTLTVLSRVKTFLTTN- 121
Query: 386 SRRTCTERLH-MRLCSA 433
R E L M LC +
Sbjct: 122 -RHVPEESLKVMLLCGS 137
>At1g74170.1 68414.m08590 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Cf-2.2 [Lycopersicon
pimpinellifolium] gi|1184077|gb|AAC15780
Length = 1068
Score = 31.1 bits (67), Expect = 0.88
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +1
Query: 310 VQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEI 423
++F KH D GG +F L + ++ GE P E+
Sbjct: 830 IEFATKHRYDAYMGGNLKLLFGMDLSENELSGEIPVEL 867
>At3g14670.1 68416.m01856 hypothetical protein
Length = 232
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +3
Query: 600 KVESGDLEADWDFLPPKKIKDPEAKKPEDWDDK 698
K + GDLE D D K KDP+ K P++ D K
Sbjct: 169 KEKDGDLEKDGDQEKDPKEKDPKEKDPKEKDPK 201
>At1g74190.1 68414.m08592 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to Cf-2.1
[Lycopersicon pimpinellifolium] gi|1184075|gb|AAC15779
Length = 965
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 310 VQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYE 420
++F KH D GG +F L + ++ GE P E
Sbjct: 762 IEFATKHRYDAYMGGNLKLLFGMDLSENELSGEIPVE 798
>At2g15695.1 68415.m01797 expressed protein contains Pfam PF05705:
Eukaryotic protein of unknown function (DUF829)
Length = 420
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -2
Query: 398 MSFCSSLQSKTLRYPPPQSMSCSCLTVNWTTKGLPSLLNGLNL 270
+ F S L K +P + MS V+W KG+ S L+GL L
Sbjct: 147 LDFTSDLNVKFALHPTIRRMSGPSRLVSWVAKGISSGLDGLYL 189
>At1g60890.1 68414.m06855 phosphatidylinositol-4-phosphate 5-kinase
family protein similar to
phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1
[Arabidopsis thaliana] GI:3702691; contains Pfam
profiles PF01504: Phosphatidylinositol-4-phosphate
5-Kinase, PF02493: MORN repeat
Length = 769
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -1
Query: 138 LLSHESSGNFSSKNTSQFIEDNASKLTTTS 49
LLSH S+ N TS+ + + S+LTTTS
Sbjct: 218 LLSHNSTINIDDLRTSKAVSRSLSELTTTS 247
>At3g27740.1 68416.m03463 carbamoyl-phosphate synthase
[glutamine-hydrolyzing] (CARA) / glutamine-dependent
carbamoyl-phosphate synthase small subunit identical to
carbamoyl phosphate synthetase small subunit GI:2462781
[Arabidopsis thaliana]
Length = 430
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Frame = +3
Query: 504 QKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGD----LEADWDFLPPKKIKDPEA 671
++DI D+ T T ++ D + ++ E+ ++ D + WD + I D
Sbjct: 157 ERDIMGVYDLDTRAITRRLREDGSLIGVLSTEQSKTDDELLQMSRSWDIVGIDLISDVSC 216
Query: 672 KKPEDWDDK 698
K P +W DK
Sbjct: 217 KSPYEWVDK 225
>At3g02885.1 68416.m00283 gibberellin-regulated protein 5 (GASA5) /
gibberellin-responsive protein 5 identical to GASA5
[Arabidopsis thaliana] GI:1289320
Length = 97
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Frame = -2
Query: 404 PCMSFCSSLQSKTLRYPP---PQSMSCSCLTVNWTTK 303
PCM FC K L PP +C C NW TK
Sbjct: 55 PCMFFCLKCCKKCLCVPPGTFGNKQTCPCYN-NWKTK 90
>At5g22690.1 68418.m02651 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1008
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/70 (25%), Positives = 29/70 (41%)
Frame = +2
Query: 230 LKTSEDARSMLSPVSSNRSVMRVNPW*SSSLSNMNKTLTVEADTSRSLTANWSRRTCTER 409
LK+ D S +S + NR+ + PW S + + E + ++ N S+ E
Sbjct: 717 LKSFPDISSNISELYLNRTAIEEVPWWIQKFSRLKRLRMRECKKLKCISPNISKLKHLEM 776
Query: 410 LHMRLCSALT 439
L C A T
Sbjct: 777 LDFSNCIATT 786
>At5g08420.1 68418.m00992 expressed protein
Length = 391
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 540 HLYTLIVKPDNTYEVLIDNEKVESGDLEADWD-FLPPKKIKDPEAKKPEDWDDKPTIPDP 716
H+ TL++K + + + NE WD FLP + K+ + KKP+ + KP P P
Sbjct: 218 HIKTLMMKKELEKDPALANES---------WDRFLPTFRKKNVKQKKPKSKEKKPYTPFP 268
>At3g31540.1 68416.m04025 hypothetical protein
Length = 699
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +3
Query: 519 CKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLPP 647
CKDD YT + + D E L+ + G L+ FL P
Sbjct: 262 CKDDAYTDYFFFVALEDAVLEDLVGKVLTKWGILDRPIRFLEP 304
>At1g67180.1 68414.m07642 zinc finger (C3HC4-type RING finger)
family protein / BRCT domain-containing protein contains
Pfam domains PF00533: BRCA1 C Terminus (BRCT) domain and
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 453
Score = 28.3 bits (60), Expect = 6.2
Identities = 22/68 (32%), Positives = 35/68 (51%)
Frame = +2
Query: 164 KEFGKFKLTAGKFFSDPEDDKGLKTSEDARSMLSPVSSNRSVMRVNPW*SSSLSNMNKTL 343
K+ K T K+FS+ +++ TSE A M V +NR +R+ SS+ NK
Sbjct: 108 KKVNKASETFDKYFSNGGENRSGSTSELATWMEKNVEANRHSVRLRTKRPSSILE-NKEN 166
Query: 344 TVEADTSR 367
+ A++SR
Sbjct: 167 SGVAESSR 174
>At5g35210.2 68418.m04175 peptidase M50 family protein /
sterol-regulatory element binding protein (SREBP) site 2
protease family protein contains PFam PF02163:
sterol-regulatory element binding protein (SREBP) site 2
protease
Length = 1409
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = -1
Query: 543 NVCRHHLCSGYLFDEMVLTLVTEDYVYLLGSRTTNVRAEHNLIWS 409
NV HH+ + + +++L ED+V + R N + E WS
Sbjct: 980 NVLVHHVIMMFYYGNPLVSLSFEDFVTRIALRCLNTQMEMLKFWS 1024
>At5g35210.1 68418.m04174 peptidase M50 family protein /
sterol-regulatory element binding protein (SREBP) site 2
protease family protein contains PFam PF02163:
sterol-regulatory element binding protein (SREBP) site 2
protease
Length = 1576
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = -1
Query: 543 NVCRHHLCSGYLFDEMVLTLVTEDYVYLLGSRTTNVRAEHNLIWS 409
NV HH+ + + +++L ED+V + R N + E WS
Sbjct: 980 NVLVHHVIMMFYYGNPLVSLSFEDFVTRIALRCLNTQMEMLKFWS 1024
>At4g18570.1 68417.m02749 proline-rich family protein common family
members: At3g25690, At4g04980, At5g61090 [Arabidopsis
thaliana]
Length = 642
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 682 KTGMTSPLFQTPKTKKPEDWDKPEHIPIQMPPNLK 786
K +T ++P TKK +D P +P PP LK
Sbjct: 5 KVRVTMGFHKSPSTKKTKDMPSPLPLPPPPPPPLK 39
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,160,702
Number of Sequences: 28952
Number of extensions: 450363
Number of successful extensions: 1464
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1440
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1785055200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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