Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30118
         (793 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    24   1.2  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   6.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   6.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   6.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   6.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   6.5  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   8.5  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   8.5  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +3

Query: 693 ATGRGLSVSGQRH 731
           +TGRGL  SGQ+H
Sbjct: 14  STGRGLKYSGQQH 26


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +1

Query: 517 IYHEPRRFSPTMLLEALTRYD 579
           +Y++PR  SP +    L  +D
Sbjct: 227 VYYDPRALSPNLEFVVLEAFD 247


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 449 EISALTDFLDWLEKEKGD 502
           E    T+ LD ++KEKGD
Sbjct: 519 EADVKTEDLDEIQKEKGD 536


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 449 EISALTDFLDWLEKEKGD 502
           E    T+ LD ++KEKGD
Sbjct: 519 EADVKTEDLDEIQKEKGD 536


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 449 EISALTDFLDWLEKEKGD 502
           E    T+ LD ++KEKGD
Sbjct: 519 EADVKTEDLDEIQKEKGD 536


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 449 EISALTDFLDWLEKEKGD 502
           E    T+ LD ++KEKGD
Sbjct: 519 EADVKTEDLDEIQKEKGD 536


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 736 VRWRCPLTESP 704
           + W  PLTESP
Sbjct: 417 IMWSSPLTESP 427


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 670 RLTSLLPCIYL 638
           RL  L+PC+YL
Sbjct: 27  RLEKLVPCVYL 37


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,884
Number of Sequences: 336
Number of extensions: 4072
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21480183
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)