BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30118 (793 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical ... 31 0.94 Z77657-5|CAB01145.2| 381|Caenorhabditis elegans Hypothetical pr... 31 1.2 Z83114-7|CAJ76943.1| 525|Caenorhabditis elegans Hypothetical pr... 29 5.0 Z83114-6|CAB63235.1| 589|Caenorhabditis elegans Hypothetical pr... 29 5.0 U53335-1|AAA96169.1| 431|Caenorhabditis elegans Hypothetical pr... 28 6.7 AF067216-3|AAC17525.1| 430|Caenorhabditis elegans Hypothetical ... 28 6.7 U40953-1|AAB52646.1| 120|Caenorhabditis elegans Hypothetical pr... 28 8.8 >AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical protein Y53F4B.9 protein. Length = 1168 Score = 31.1 bits (67), Expect = 0.94 Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 8/77 (10%) Frame = +2 Query: 248 GYTGRRLIDEICQIAAYTPKQTY--SQYIMPYGD-----LNPGARRRHNVRV-VTVGRYR 403 G +G+ ++IC I TP+ Y + +MP+ D +NP R V++ +T Sbjct: 161 GTSGKLKFNKICSIRVITPRPNYNPNDLVMPHSDDEEDTMNPNRERLSTVKLRLTPTSQA 220 Query: 404 MLKDMVSHKILKTKSEI 454 L+ M S + + +E+ Sbjct: 221 KLEQMQSEDVFQFNAEM 237 >Z77657-5|CAB01145.2| 381|Caenorhabditis elegans Hypothetical protein F08H9.8 protein. Length = 381 Score = 30.7 bits (66), Expect = 1.2 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = -1 Query: 226 YFPGGRPTGFSASAGGTSVFASISLPFTF 140 Y P + + S GGT VF S+S FTF Sbjct: 46 YMPFSETSSYCQSLGGTQVFISLSYEFTF 74 >Z83114-7|CAJ76943.1| 525|Caenorhabditis elegans Hypothetical protein K09B11.5b protein. Length = 525 Score = 28.7 bits (61), Expect = 5.0 Identities = 9/33 (27%), Positives = 19/33 (57%) Frame = +2 Query: 35 IRRASYRSTRLIFCLPTSVHQRVCKLGINGHGD 133 +RRA R+++ + CL + ++C +N + D Sbjct: 34 VRRAMQRNSKKVLCLSVKIDGKICHFTLNSNKD 66 >Z83114-6|CAB63235.1| 589|Caenorhabditis elegans Hypothetical protein K09B11.5a protein. Length = 589 Score = 28.7 bits (61), Expect = 5.0 Identities = 9/33 (27%), Positives = 19/33 (57%) Frame = +2 Query: 35 IRRASYRSTRLIFCLPTSVHQRVCKLGINGHGD 133 +RRA R+++ + CL + ++C +N + D Sbjct: 98 VRRAMQRNSKKVLCLSVKIDGKICHFTLNSNKD 130 >U53335-1|AAA96169.1| 431|Caenorhabditis elegans Hypothetical protein C55C3.4 protein. Length = 431 Score = 28.3 bits (60), Expect = 6.7 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = -1 Query: 121 INA*FANSLMNRCW*TKYEPRRPV 50 +N FA ++ +CW KYE R P+ Sbjct: 346 VNKEFAEFILTKCWPEKYEDRLPM 369 >AF067216-3|AAC17525.1| 430|Caenorhabditis elegans Hypothetical protein C35E7.10a protein. Length = 430 Score = 28.3 bits (60), Expect = 6.7 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = -1 Query: 121 INA*FANSLMNRCW*TKYEPRRPV 50 +N FA ++ +CW KYE R P+ Sbjct: 346 VNKEFAEFILTKCWPEKYEDRLPM 369 >U40953-1|AAB52646.1| 120|Caenorhabditis elegans Hypothetical protein F53B1.3 protein. Length = 120 Score = 27.9 bits (59), Expect = 8.8 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 5/53 (9%) Frame = -1 Query: 787 CCSPCAR-C*QSYRQ-LLPVRWRCPLTESPRPVAHE---PTLAARLTSLLPCI 644 C S C C Q + + L+ RW CPL E E +L ++ ++PC+ Sbjct: 45 CMSRCRTGCTQQHSEDLMMPRWHCPLQEEDDNDVEEEEKTSLGGKMLIIVPCV 97 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,672,253 Number of Sequences: 27780 Number of extensions: 360450 Number of successful extensions: 1098 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1056 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1098 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 1924757034 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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