Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30118
         (793 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical ...    31   0.94 
Z77657-5|CAB01145.2|  381|Caenorhabditis elegans Hypothetical pr...    31   1.2  
Z83114-7|CAJ76943.1|  525|Caenorhabditis elegans Hypothetical pr...    29   5.0  
Z83114-6|CAB63235.1|  589|Caenorhabditis elegans Hypothetical pr...    29   5.0  
U53335-1|AAA96169.1|  431|Caenorhabditis elegans Hypothetical pr...    28   6.7  
AF067216-3|AAC17525.1|  430|Caenorhabditis elegans Hypothetical ...    28   6.7  
U40953-1|AAB52646.1|  120|Caenorhabditis elegans Hypothetical pr...    28   8.8  

>AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical
           protein Y53F4B.9 protein.
          Length = 1168

 Score = 31.1 bits (67), Expect = 0.94
 Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
 Frame = +2

Query: 248 GYTGRRLIDEICQIAAYTPKQTY--SQYIMPYGD-----LNPGARRRHNVRV-VTVGRYR 403
           G +G+   ++IC I   TP+  Y  +  +MP+ D     +NP   R   V++ +T     
Sbjct: 161 GTSGKLKFNKICSIRVITPRPNYNPNDLVMPHSDDEEDTMNPNRERLSTVKLRLTPTSQA 220

Query: 404 MLKDMVSHKILKTKSEI 454
            L+ M S  + +  +E+
Sbjct: 221 KLEQMQSEDVFQFNAEM 237


>Z77657-5|CAB01145.2|  381|Caenorhabditis elegans Hypothetical
           protein F08H9.8 protein.
          Length = 381

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -1

Query: 226 YFPGGRPTGFSASAGGTSVFASISLPFTF 140
           Y P    + +  S GGT VF S+S  FTF
Sbjct: 46  YMPFSETSSYCQSLGGTQVFISLSYEFTF 74


>Z83114-7|CAJ76943.1|  525|Caenorhabditis elegans Hypothetical
           protein K09B11.5b protein.
          Length = 525

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 9/33 (27%), Positives = 19/33 (57%)
 Frame = +2

Query: 35  IRRASYRSTRLIFCLPTSVHQRVCKLGINGHGD 133
           +RRA  R+++ + CL   +  ++C   +N + D
Sbjct: 34  VRRAMQRNSKKVLCLSVKIDGKICHFTLNSNKD 66


>Z83114-6|CAB63235.1|  589|Caenorhabditis elegans Hypothetical
           protein K09B11.5a protein.
          Length = 589

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 9/33 (27%), Positives = 19/33 (57%)
 Frame = +2

Query: 35  IRRASYRSTRLIFCLPTSVHQRVCKLGINGHGD 133
           +RRA  R+++ + CL   +  ++C   +N + D
Sbjct: 98  VRRAMQRNSKKVLCLSVKIDGKICHFTLNSNKD 130


>U53335-1|AAA96169.1|  431|Caenorhabditis elegans Hypothetical
           protein C55C3.4 protein.
          Length = 431

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 121 INA*FANSLMNRCW*TKYEPRRPV 50
           +N  FA  ++ +CW  KYE R P+
Sbjct: 346 VNKEFAEFILTKCWPEKYEDRLPM 369


>AF067216-3|AAC17525.1|  430|Caenorhabditis elegans Hypothetical
           protein C35E7.10a protein.
          Length = 430

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 121 INA*FANSLMNRCW*TKYEPRRPV 50
           +N  FA  ++ +CW  KYE R P+
Sbjct: 346 VNKEFAEFILTKCWPEKYEDRLPM 369


>U40953-1|AAB52646.1|  120|Caenorhabditis elegans Hypothetical
           protein F53B1.3 protein.
          Length = 120

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
 Frame = -1

Query: 787 CCSPCAR-C*QSYRQ-LLPVRWRCPLTESPRPVAHE---PTLAARLTSLLPCI 644
           C S C   C Q + + L+  RW CPL E       E    +L  ++  ++PC+
Sbjct: 45  CMSRCRTGCTQQHSEDLMMPRWHCPLQEEDDNDVEEEEKTSLGGKMLIIVPCV 97


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,672,253
Number of Sequences: 27780
Number of extensions: 360450
Number of successful extensions: 1098
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1098
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)