Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30117
(751 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 142 4e-34
03_01_0547 + 4093196-4093657,4094267-4095148 142 4e-34
03_01_0544 + 4082528-4082989,4083585-4084466 142 4e-34
03_01_0543 + 4076981-4077442,4078145-4079026 142 4e-34
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 50 1e-06
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 47 1e-05
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 47 1e-05
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 43 2e-04
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 37 0.015
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 35 0.060
02_04_0462 + 23131433-23132836 34 0.10
08_01_0079 - 554936-554977,555108-555297,555384-555430,556039-55... 30 2.3
11_06_0516 + 24502645-24504507 29 3.9
08_02_1414 + 26901937-26902597,26903361-26903397,26903733-269037... 29 3.9
11_06_0755 + 26943705-26944519,26944833-26944839,26945318-26947903 29 5.2
06_03_1165 - 28106604-28106915 28 9.1
04_04_0511 - 25800371-25800454,25800563-25800629,25800903-258010... 28 9.1
01_06_1406 - 37073548-37073822,37073892-37074111,37074200-370742... 28 9.1
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 142 bits (343), Expect = 4e-34
Identities = 62/84 (73%), Positives = 75/84 (89%)
Frame = +2
Query: 2 KPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNN 181
KPG +V F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RGYVA +SK++
Sbjct: 261 KPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDD 320
Query: 182 PPKGAADFTAQVIVLNHPGQISNG 253
P K AA FT+QVI++NHPGQI NG
Sbjct: 321 PAKEAASFTSQVIIMNHPGQIGNG 344
Score = 131 bits (316), Expect = 7e-31
Identities = 57/88 (64%), Positives = 72/88 (81%)
Frame = +1
Query: 253 FTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQ 432
+ PVLDCHT+HIA KFAE+ K+DRR+GK E PK +K+GDA +V ++P+KP+ VE+F
Sbjct: 345 YAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFS 404
Query: 433 EFPPLGRFAVRDMRQTVAVGVIKAVTSR 516
E+PPLGRFAVRDMRQTVAVGVIK V +
Sbjct: 405 EYPPLGRFAVRDMRQTVAVGVIKNVEKK 432
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 142 bits (343), Expect = 4e-34
Identities = 62/84 (73%), Positives = 75/84 (89%)
Frame = +2
Query: 2 KPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNN 181
KPG +V F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RGYVA +SK++
Sbjct: 261 KPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDD 320
Query: 182 PPKGAADFTAQVIVLNHPGQISNG 253
P K AA FT+QVI++NHPGQI NG
Sbjct: 321 PAKEAASFTSQVIIMNHPGQIGNG 344
Score = 131 bits (316), Expect = 7e-31
Identities = 57/88 (64%), Positives = 72/88 (81%)
Frame = +1
Query: 253 FTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQ 432
+ PVLDCHT+HIA KFAE+ K+DRR+GK E PK +K+GDA +V ++P+KP+ VE+F
Sbjct: 345 YAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFS 404
Query: 433 EFPPLGRFAVRDMRQTVAVGVIKAVTSR 516
E+PPLGRFAVRDMRQTVAVGVIK V +
Sbjct: 405 EYPPLGRFAVRDMRQTVAVGVIKNVEKK 432
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 142 bits (343), Expect = 4e-34
Identities = 62/84 (73%), Positives = 75/84 (89%)
Frame = +2
Query: 2 KPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNN 181
KPG +V F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RGYVA +SK++
Sbjct: 261 KPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDD 320
Query: 182 PPKGAADFTAQVIVLNHPGQISNG 253
P K AA FT+QVI++NHPGQI NG
Sbjct: 321 PAKEAASFTSQVIIMNHPGQIGNG 344
Score = 131 bits (316), Expect = 7e-31
Identities = 57/88 (64%), Positives = 72/88 (81%)
Frame = +1
Query: 253 FTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQ 432
+ PVLDCHT+HIA KFAE+ K+DRR+GK E PK +K+GDA +V ++P+KP+ VE+F
Sbjct: 345 YAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFS 404
Query: 433 EFPPLGRFAVRDMRQTVAVGVIKAVTSR 516
E+PPLGRFAVRDMRQTVAVGVIK V +
Sbjct: 405 EYPPLGRFAVRDMRQTVAVGVIKNVEKK 432
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 142 bits (343), Expect = 4e-34
Identities = 62/84 (73%), Positives = 75/84 (89%)
Frame = +2
Query: 2 KPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNN 181
KPG +V F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RGYVA +SK++
Sbjct: 261 KPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDD 320
Query: 182 PPKGAADFTAQVIVLNHPGQISNG 253
P K AA FT+QVI++NHPGQI NG
Sbjct: 321 PAKEAASFTSQVIIMNHPGQIGNG 344
Score = 131 bits (316), Expect = 7e-31
Identities = 57/88 (64%), Positives = 72/88 (81%)
Frame = +1
Query: 253 FTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQ 432
+ PVLDCHT+HIA KFAE+ K+DRR+GK E PK +K+GDA +V ++P+KP+ VE+F
Sbjct: 345 YAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFS 404
Query: 433 EFPPLGRFAVRDMRQTVAVGVIKAVTSR 516
E+PPLGRFAVRDMRQTVAVGVIK V +
Sbjct: 405 EYPPLGRFAVRDMRQTVAVGVIKNVEKK 432
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/74 (28%), Positives = 41/74 (55%)
Frame = +1
Query: 286 IACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 465
++ +I ++++TGK+++ P+ + S A++ + K +CVE F LGR +R
Sbjct: 577 VSASMVKILSLLEQKTGKASKKIPRFLTSRQTAVIEVKLEKEVCVEEFSNLKALGRVFLR 636
Query: 466 DMRQTVAVGVIKAV 507
T+AVG++ V
Sbjct: 637 SQGNTIAVGIVSRV 650
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Frame = +1
Query: 265 LDCHTAHI--ACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEF 438
++ H H+ A + +I +D+ GK ++ P+ +KS A+V + P+CV+ F +
Sbjct: 593 VEFHIHHVKEAARVTKIVALLDK-AGKPSKTAPRFLKSKQNAVVQVTLDAPVCVQEFSKC 651
Query: 439 PPLGRFAVRDMRQTVAVGVI 498
LGR +R T+AVGV+
Sbjct: 652 RALGRAFLRSSGSTIAVGVV 671
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Frame = +1
Query: 265 LDCHTAHI--ACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEF 438
++ H H+ A + +I +D+ GK ++ P+ +KS A+V + P+CV+ F +
Sbjct: 593 VEFHIHHVKEAARVTKIVALLDK-AGKPSKTAPRFLKSKQNAVVQVTLDAPVCVQEFSKC 651
Query: 439 PPLGRFAVRDMRQTVAVGVI 498
LGR +R T+AVGV+
Sbjct: 652 RALGRAFLRSSGSTIAVGVV 671
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Frame = +1
Query: 253 FTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKS-------IKSGDAAIVNLVPSKP 411
+ VL H+ C+ ++ E++D + K + K +K+G + + +
Sbjct: 338 YKAVLHIHSVVEECEIVDLIEEIDMKKKKEADPKKKKPKRKPLFVKNGAVVVCRIQVNNL 397
Query: 412 LCVESFQEFPPLGRFAVR 465
+C+E+F +FP LGRF +R
Sbjct: 398 ICIENFSDFPQLGRFTLR 415
Score = 31.9 bits (69), Expect = 0.56
Identities = 16/75 (21%), Positives = 34/75 (45%)
Frame = +2
Query: 2 KPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNN 181
+ G ++ P +V + + ++ A P +NV + + +++ G+V S N
Sbjct: 253 REGDSLLVMPNKTNVKVIGISLDEHKVRRAGPAENVRVKLSGIEDEDIMAGFVL-SSIGN 311
Query: 182 PPKGAADFTAQVIVL 226
P +F AQ+ +L
Sbjct: 312 PVGAVTEFNAQLQIL 326
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 37.1 bits (82), Expect = 0.015
Identities = 19/73 (26%), Positives = 35/73 (47%)
Frame = +2
Query: 8 GTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPP 187
G ++ P +V SV + ++ A PG+NV + + ++ G+V K NP
Sbjct: 210 GDNMLVMPNKANVKVISVHCDEDRVRSAAPGENVRVKLSGIEEDDITAGFVLSSIK-NPV 268
Query: 188 KGAADFTAQVIVL 226
++F AQ+ +L
Sbjct: 269 SAISEFRAQLQIL 281
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 35.1 bits (77), Expect = 0.060
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Frame = +2
Query: 38 ITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQV 217
+ T V VEM + L GDNVG ++ + +++RG V K K F A++
Sbjct: 311 LKTTVTGVEMFKKILDHGEAGDNVGLLLRGLKRGDVQRGQVV--CKPGTVKTYQKFEAEI 368
Query: 218 IVL------NHPGQISNGSHQYWIAT 277
VL H +SN S Q++ T
Sbjct: 369 YVLTKDEGGRHTAFLSNYSPQFYFRT 394
>02_04_0462 + 23131433-23132836
Length = 467
Score = 34.3 bits (75), Expect = 0.10
Identities = 18/66 (27%), Positives = 31/66 (46%)
Frame = +2
Query: 50 VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLN 229
V VEM + + +A+ GDNVG ++ + ++ RG V + P D V+ +
Sbjct: 324 VTGVEMFQKTMDDAMAGDNVGLLLRGMQKDDIERGMVLAKPASITPHTKFDAVVYVLKKD 383
Query: 230 HPGQIS 247
G+ S
Sbjct: 384 EGGRHS 389
>08_01_0079 - 554936-554977,555108-555297,555384-555430,556039-556139,
556223-556271,556432-556494,556602-556695,556822-556924,
557719-557791,557872-557984,558068-558149,558386-558913,
559015-559098,560156-560305,561021-561191,561759-561809,
562601-562738,562823-562894,563236-563391,563681-563839,
564080-564180,564577-564829
Length = 939
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +2
Query: 38 ITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQV 217
+ + KS+++ A ++ ++ +V + + KE GY+ + P G D Q
Sbjct: 789 VARQFKSLKVKAVAALLSLSRNDTDEDVDSNNEKEKSYGYMMMERLTGSPDGRIDHVLQE 848
Query: 218 IVLNHPGQISNGSH-QYW 268
HP + GSH YW
Sbjct: 849 KTFQHPYLSALGSHTNYW 866
>11_06_0516 + 24502645-24504507
Length = 620
Score = 29.1 bits (62), Expect = 3.9
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = +2
Query: 59 VEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPG 238
VE HEAL AV D V S++E+ R GD + PP + V++ G
Sbjct: 114 VEQVHEALL-AVDAD---IEVIKASIREVYRFPCDGDERRGPPPPSTAPATGVVMTRRMG 169
Query: 239 QISNG 253
+I G
Sbjct: 170 EIRRG 174
>08_02_1414 +
26901937-26902597,26903361-26903397,26903733-26903791,
26904198-26904388,26904591-26904680,26904833-26904926,
26905008-26905159,26905250-26905347,26905400-26905459,
26905460-26905598,26905686-26905784,26905883-26906018,
26906352-26906413
Length = 625
Score = 29.1 bits (62), Expect = 3.9
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Frame = +2
Query: 5 PGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDS---K 175
P TIV +P T KSVE +E L A G ++G + + + G+ K
Sbjct: 262 PSTIVGPSPVAGITVDKSVEFSYEELSNATQGFSIGNKIGQGGFGAVYYAELRGEKAAIK 321
Query: 176 NNPPKGAADFTAQVIVLNH 232
+ +F A++ VL H
Sbjct: 322 KMDMQATHEFLAELKVLTH 340
>11_06_0755 + 26943705-26944519,26944833-26944839,26945318-26947903
Length = 1135
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -3
Query: 716 NYKIMLHYKPCKKYRKGMSL*P-FFPSK 636
N M PCKK +KGM++ P FF SK
Sbjct: 657 NVNKMSKLNPCKKQKKGMNILPKFFTSK 684
>06_03_1165 - 28106604-28106915
Length = 103
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +1
Query: 49 SQICGDAPRSSPRSCTWRQCRFQRKERVRQGIASWLCCW 165
SQ G A SSP + R R +R E + A L CW
Sbjct: 62 SQTGGAAASSSPAAACGRAARSKRSEEEKMQKAYHLVCW 100
>04_04_0511 -
25800371-25800454,25800563-25800629,25800903-25801000,
25801094-25801152,25801247-25801379,25801461-25801532,
25801628-25801678,25802000-25802111,25802231-25802604
Length = 349
Score = 27.9 bits (59), Expect = 9.1
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +2
Query: 20 VFAPANITTEVKSVEMHHEAL-QEAVPGDNVGFNV-KNVSVKELRRGYVAGDSKNNPPKG 193
+F P+ + SV +H + E + GDN ++ +N + + G V + N P G
Sbjct: 34 LFVPSGTMANLISVLVHCDTRGSEVILGDNSHIHIYENGGISTI--GGVHPKTVRNNPDG 91
Query: 194 AADFTAQVIVLNHP 235
D V+ + HP
Sbjct: 92 TMDIDKIVVAIRHP 105
>01_06_1406 -
37073548-37073822,37073892-37074111,37074200-37074246,
37074404-37074576,37075161-37075238,37075751-37075813,
37075889-37075961,37076150-37076189,37076302-37076368,
37076719-37078472,37079128-37079230,37080041-37080078,
37080221-37080347,37081944-37082152
Length = 1088
Score = 27.9 bits (59), Expect = 9.1
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = -3
Query: 503 ALMTPTATVCLMSRTAKRPRGGNSWKDSTHRGLEGTKLTMAASPDLMDFGLTSVDLPVRR 324
A+ P TV + T ++ RG K +GL G KLT S L LT ++ +R
Sbjct: 282 AIAYPMPTVNPVESTPRKGRGRPRKKPVEIKGLSGIKLTEDLSTALSPIALTCMEPKKKR 341
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,865,730
Number of Sequences: 37544
Number of extensions: 444364
Number of successful extensions: 1251
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1250
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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