Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30117
(751 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 171 8e-45
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 165 5e-43
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 136 2e-34
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 117 1e-28
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 24 1.3
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 24 1.3
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 24 1.3
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 23 2.3
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 3.1
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 171 bits (415), Expect = 8e-45
Identities = 79/84 (94%), Positives = 81/84 (96%)
Frame = +2
Query: 2 KPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNN 181
KPG +V FAPA +TTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNN
Sbjct: 273 KPGMVVTFAPAGLTTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNN 332
Query: 182 PPKGAADFTAQVIVLNHPGQISNG 253
PPKGAADFTAQVIVLNHPGQISNG
Sbjct: 333 PPKGAADFTAQVIVLNHPGQISNG 356
Score = 165 bits (400), Expect = 5e-43
Identities = 76/86 (88%), Positives = 81/86 (94%)
Frame = +1
Query: 253 FTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQ 432
+TPVLDCHTAHIACKFA+IKEK DRR GK+TE NPKSIKSGDAAIV LVPSKP+C E+FQ
Sbjct: 357 YTPVLDCHTAHIACKFADIKEKCDRRNGKTTEENPKSIKSGDAAIVMLVPSKPMCAEAFQ 416
Query: 433 EFPPLGRFAVRDMRQTVAVGVIKAVT 510
EFPPLGRFAVRDMRQTVAVGVIKAVT
Sbjct: 417 EFPPLGRFAVRDMRQTVAVGVIKAVT 442
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 165 bits (400), Expect = 5e-43
Identities = 76/86 (88%), Positives = 82/86 (95%)
Frame = +1
Query: 253 FTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQ 432
+TPVLDCHTAHIACKFAEIKEK DRRTGK+TE NPKSIKSGDAAIV L P+KP+CVE+FQ
Sbjct: 357 YTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTKPMCVEAFQ 416
Query: 433 EFPPLGRFAVRDMRQTVAVGVIKAVT 510
EFPPLGRFAVRDMRQTVAVGVIK+VT
Sbjct: 417 EFPPLGRFAVRDMRQTVAVGVIKSVT 442
Score = 162 bits (393), Expect = 4e-42
Identities = 74/84 (88%), Positives = 79/84 (94%)
Frame = +2
Query: 2 KPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNN 181
KPG +V FAPA +TTEVKSVEMHHEAL EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN
Sbjct: 273 KPGMLVTFAPAALTTEVKSVEMHHEALTEALPGDNVGFNVKNISVKELRRGYVAGDSKNQ 332
Query: 182 PPKGAADFTAQVIVLNHPGQISNG 253
PP+GAADFTAQVIVLNHPGQISNG
Sbjct: 333 PPRGAADFTAQVIVLNHPGQISNG 356
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 136 bits (330), Expect = 2e-34
Identities = 62/67 (92%), Positives = 65/67 (97%)
Frame = +2
Query: 53 KSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNH 232
KSVEMHHEAL EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PP+GAADFTAQVIVLNH
Sbjct: 1 KSVEMHHEALTEALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNH 60
Query: 233 PGQISNG 253
PGQISNG
Sbjct: 61 PGQISNG 67
Score = 98.7 bits (235), Expect = 5e-23
Identities = 45/52 (86%), Positives = 48/52 (92%)
Frame = +1
Query: 253 FTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSK 408
+TPVLDCHTAHIACKFAEIKEK DRRTGK+TE NPKSIKSGDAAIV L P+K
Sbjct: 68 YTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTK 119
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 117 bits (282), Expect = 1e-28
Identities = 54/59 (91%), Positives = 56/59 (94%)
Frame = +2
Query: 2 KPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 178
KPG +V FAPA +TTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN
Sbjct: 216 KPGMVVTFAPAGLTTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 274
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 24.2 bits (50), Expect = 1.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 619 KYRSCMKNCAVNSSSYFLPLVAFS 548
K+ C+KN A SSYF+ + F+
Sbjct: 94 KFYDCLKNSADTISSYFVGKMYFN 117
Score = 22.2 bits (45), Expect = 5.3
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +3
Query: 477 DSCCRSHQGC 506
D+CCR+H C
Sbjct: 56 DACCRTHDMC 65
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 24.2 bits (50), Expect = 1.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 619 KYRSCMKNCAVNSSSYFLPLVAFS 548
K+ C+KN A SSYF+ + F+
Sbjct: 99 KFYDCLKNSADTISSYFVGKMYFN 122
Score = 22.2 bits (45), Expect = 5.3
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +3
Query: 477 DSCCRSHQGC 506
D+CCR+H C
Sbjct: 61 DACCRTHDMC 70
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 24.2 bits (50), Expect = 1.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 619 KYRSCMKNCAVNSSSYFLPLVAFS 548
K+ C+KN A SSYF+ + F+
Sbjct: 99 KFYDCLKNSADTISSYFVGKMYFN 122
Score = 22.2 bits (45), Expect = 5.3
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +3
Query: 477 DSCCRSHQGC 506
D+CCR+H C
Sbjct: 61 DACCRTHDMC 70
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 23.4 bits (48), Expect = 2.3
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -1
Query: 658 CSPFFLRNTFR*MKYRSCMKN 596
C FF R+ + ++YR C KN
Sbjct: 87 CKGFFRRSIQQKIQYRPCTKN 107
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.0 bits (47), Expect = 3.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 131 SVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPG 238
S ++LR ++A + + PKG Q++VLN G
Sbjct: 283 STRDLREIHLAYNGLRDLPKGIFTRLEQLLVLNLAG 318
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,049
Number of Sequences: 438
Number of extensions: 4361
Number of successful extensions: 23
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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