Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30116
         (447 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF506022-1|AAM46898.1|  685|Tribolium castaneum polyubiquitin pr...    45   3e-07
AF506023-1|AAM46899.1|   76|Tribolium castaneum polyubiquitin pr...    44   5e-07
AF506020-1|AAM46896.1|  112|Tribolium castaneum polyubiquitin pr...    44   5e-07
AF506021-1|AAM46897.1|   64|Tribolium castaneum polyubiquitin pr...    29   0.020
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    20   9.3  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    20   9.3  

>AF506022-1|AAM46898.1|  685|Tribolium castaneum polyubiquitin
           protein.
          Length = 685

 Score = 45.2 bits (102), Expect = 3e-07
 Identities = 19/33 (57%), Positives = 24/33 (72%)
 Frame = +3

Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGGE 353
           F+GKQ+ D +T  DY +Q  S LHLVL LRGG+
Sbjct: 653 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGQ 685



 Score = 44.8 bits (101), Expect = 4e-07
 Identities = 20/34 (58%), Positives = 24/34 (70%)
 Frame = +3

Query: 249 SHFSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
           S F+GKQ+ D +T  DY +Q  S LHLVL LRGG
Sbjct: 423 SIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456



 Score = 44.4 bits (100), Expect = 5e-07
 Identities = 19/32 (59%), Positives = 23/32 (71%)
 Frame = +3

Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
           F+GKQ+ D +T  DY +Q  S LHLVL LRGG
Sbjct: 45  FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76



 Score = 44.4 bits (100), Expect = 5e-07
 Identities = 19/32 (59%), Positives = 23/32 (71%)
 Frame = +3

Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
           F+GKQ+ D +T  DY +Q  S LHLVL LRGG
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152



 Score = 44.4 bits (100), Expect = 5e-07
 Identities = 19/32 (59%), Positives = 23/32 (71%)
 Frame = +3

Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
           F+GKQ+ D +T  DY +Q  S LHLVL LRGG
Sbjct: 197 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228



 Score = 44.4 bits (100), Expect = 5e-07
 Identities = 19/32 (59%), Positives = 23/32 (71%)
 Frame = +3

Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
           F+GKQ+ D +T  DY +Q  S LHLVL LRGG
Sbjct: 273 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304



 Score = 44.4 bits (100), Expect = 5e-07
 Identities = 19/32 (59%), Positives = 23/32 (71%)
 Frame = +3

Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
           F+GKQ+ D +T  DY +Q  S LHLVL LRGG
Sbjct: 349 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380



 Score = 44.4 bits (100), Expect = 5e-07
 Identities = 19/32 (59%), Positives = 23/32 (71%)
 Frame = +3

Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
           F+GKQ+ D +T  DY +Q  S LHLVL LRGG
Sbjct: 501 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532



 Score = 44.4 bits (100), Expect = 5e-07
 Identities = 19/32 (59%), Positives = 23/32 (71%)
 Frame = +3

Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
           F+GKQ+ D +T  DY +Q  S LHLVL LRGG
Sbjct: 577 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 608



 Score = 29.1 bits (62), Expect = 0.020
 Identities = 18/45 (40%), Positives = 18/45 (40%)
 Frame = +1

Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
           M I VKTLTG                        GIPP QQRLIF
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF 45



 Score = 29.1 bits (62), Expect = 0.020
 Identities = 18/45 (40%), Positives = 18/45 (40%)
 Frame = +1

Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
           M I VKTLTG                        GIPP QQRLIF
Sbjct: 77  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF 121



 Score = 29.1 bits (62), Expect = 0.020
 Identities = 18/45 (40%), Positives = 18/45 (40%)
 Frame = +1

Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
           M I VKTLTG                        GIPP QQRLIF
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF 197



 Score = 29.1 bits (62), Expect = 0.020
 Identities = 18/45 (40%), Positives = 18/45 (40%)
 Frame = +1

Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
           M I VKTLTG                        GIPP QQRLIF
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF 273



 Score = 29.1 bits (62), Expect = 0.020
 Identities = 18/45 (40%), Positives = 18/45 (40%)
 Frame = +1

Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
           M I VKTLTG                        GIPP QQRLIF
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF 349



 Score = 29.1 bits (62), Expect = 0.020
 Identities = 18/45 (40%), Positives = 18/45 (40%)
 Frame = +1

Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
           M I VKTLTG                        GIPP QQRLIF
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF 501



 Score = 29.1 bits (62), Expect = 0.020
 Identities = 18/45 (40%), Positives = 18/45 (40%)
 Frame = +1

Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
           M I VKTLTG                        GIPP QQRLIF
Sbjct: 533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF 577



 Score = 29.1 bits (62), Expect = 0.020
 Identities = 18/45 (40%), Positives = 18/45 (40%)
 Frame = +1

Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
           M I VKTLTG                        GIPP QQRLIF
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF 653



 Score = 26.6 bits (56), Expect = 0.11
 Identities = 17/45 (37%), Positives = 17/45 (37%)
 Frame = +1

Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
           M I VKTLTG                        GIPP QQR IF
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIF 425


>AF506023-1|AAM46899.1|   76|Tribolium castaneum polyubiquitin
           protein.
          Length = 76

 Score = 44.4 bits (100), Expect = 5e-07
 Identities = 19/32 (59%), Positives = 23/32 (71%)
 Frame = +3

Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
           F+GKQ+ D +T  DY +Q  S LHLVL LRGG
Sbjct: 45  FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76



 Score = 29.1 bits (62), Expect = 0.020
 Identities = 18/45 (40%), Positives = 18/45 (40%)
 Frame = +1

Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
           M I VKTLTG                        GIPP QQRLIF
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF 45


>AF506020-1|AAM46896.1|  112|Tribolium castaneum polyubiquitin
           protein.
          Length = 112

 Score = 44.4 bits (100), Expect = 5e-07
 Identities = 19/32 (59%), Positives = 23/32 (71%)
 Frame = +3

Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
           F+GKQ+ D +T  DY +Q  S LHLVL LRGG
Sbjct: 17  FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 48



 Score = 27.1 bits (57), Expect = 0.081
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 249 SHFSGKQMNDEKTAQDYKVQ 308
           S F+GKQ+ D +T  DY +Q
Sbjct: 91  SIFAGKQLEDGRTLSDYNIQ 110



 Score = 26.6 bits (56), Expect = 0.11
 Identities = 17/45 (37%), Positives = 17/45 (37%)
 Frame = +1

Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
           M I VKTLTG                        GIPP QQR IF
Sbjct: 49  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIF 93



 Score = 25.4 bits (53), Expect = 0.25
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = +1

Query: 226 GIPPQQQRLIF 258
           GIPP QQRLIF
Sbjct: 7   GIPPDQQRLIF 17


>AF506021-1|AAM46897.1|   64|Tribolium castaneum polyubiquitin
           protein.
          Length = 64

 Score = 29.1 bits (62), Expect = 0.020
 Identities = 18/45 (40%), Positives = 18/45 (40%)
 Frame = +1

Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
           M I VKTLTG                        GIPP QQRLIF
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF 45



 Score = 26.6 bits (56), Expect = 0.11
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 255 FSGKQMNDEKTAQDYKVQ 308
           F+GKQ+ D +T  DY +Q
Sbjct: 45  FAGKQLEDGRTLSDYNIQ 62


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 5/12 (41%), Positives = 10/12 (83%)
 Frame = +1

Query: 301 KFREVQYFILFW 336
           K ++V+YF++ W
Sbjct: 156 KSKQVEYFLIHW 167


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 5/12 (41%), Positives = 10/12 (83%)
 Frame = +1

Query: 301 KFREVQYFILFW 336
           K ++V+YF++ W
Sbjct: 156 KSKQVEYFLIHW 167


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,247
Number of Sequences: 336
Number of extensions: 1411
Number of successful extensions: 28
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10090848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)