Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30116
(447 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 62 2e-10
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 45 2e-05
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 45 2e-05
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 44 4e-05
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 44 4e-05
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 44 4e-05
Z99266-1|CAB16464.1| 292|Caenorhabditis elegans F15C11.2 protein. 29 2.0
Z98262-3|CAD44156.1| 454|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z98262-2|CAD44155.1| 484|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z98262-1|CAB10932.1| 502|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z71260-4|CAD44116.1| 454|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z71260-3|CAD44115.1| 484|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z71260-2|CAA95799.1| 502|Caenorhabditis elegans Hypothetical pr... 29 2.0
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 28 3.6
U21320-6|AAA62538.4| 234|Caenorhabditis elegans Hypothetical pr... 27 4.7
Z72509-2|CAA96646.1| 520|Caenorhabditis elegans Hypothetical pr... 27 6.2
AF074395-1|AAC26791.1| 365|Caenorhabditis elegans CET-1 protein. 27 6.2
Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical pr... 27 8.2
U61952-4|AAK84529.1| 267|Caenorhabditis elegans Hypothetical pr... 27 8.2
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 62.1 bits (144), Expect = 2e-10
Identities = 28/32 (87%), Positives = 30/32 (93%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQMND+KTA DYKV GGSVLHLVLALRGG
Sbjct: 45 FAGKQMNDDKTAADYKVLGGSVLHLVLALRGG 76
Score = 34.3 bits (75), Expect = 0.041
Identities = 20/45 (44%), Positives = 20/45 (44%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
MLIKVKTLTG GIPP QQRLIF
Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIF 45
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 45.2 bits (102), Expect = 2e-05
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGGE 353
F+GKQ+ D +T DY +Q S LHLVL LRGG+
Sbjct: 805 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGD 837
Score = 44.4 bits (100), Expect = 4e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 45 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 44.4 bits (100), Expect = 4e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
Score = 44.4 bits (100), Expect = 4e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 197 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
Score = 44.4 bits (100), Expect = 4e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 273 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
Score = 44.4 bits (100), Expect = 4e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 349 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
Score = 44.4 bits (100), Expect = 4e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 425 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456
Score = 44.4 bits (100), Expect = 4e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 501 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532
Score = 44.4 bits (100), Expect = 4e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 577 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 608
Score = 44.4 bits (100), Expect = 4e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 653 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 684
Score = 44.4 bits (100), Expect = 4e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 729 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 760
Score = 29.1 bits (62), Expect = 1.5
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIF 45
Score = 29.1 bits (62), Expect = 1.5
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIF 121
Score = 29.1 bits (62), Expect = 1.5
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIF 197
Score = 29.1 bits (62), Expect = 1.5
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIF 273
Score = 29.1 bits (62), Expect = 1.5
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIF 349
Score = 29.1 bits (62), Expect = 1.5
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIF 501
Score = 29.1 bits (62), Expect = 1.5
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIF 577
Score = 29.1 bits (62), Expect = 1.5
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIF 653
Score = 29.1 bits (62), Expect = 1.5
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIF 729
Score = 29.1 bits (62), Expect = 1.5
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIF 805
Score = 26.6 bits (56), Expect = 8.2
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTL G GIPP QQRLIF
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIF 425
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 45.2 bits (102), Expect = 2e-05
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGGE 353
F+GKQ+ D +T DY +Q S LHLVL LRGG+
Sbjct: 805 FAGKQLEDGRTLSDYNIQKQSTLHLVLRLRGGD 837
Score = 44.4 bits (100), Expect = 4e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 45 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 44.4 bits (100), Expect = 4e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
Score = 44.4 bits (100), Expect = 4e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 197 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
Score = 44.4 bits (100), Expect = 4e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 273 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
Score = 44.4 bits (100), Expect = 4e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 349 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
Score = 44.4 bits (100), Expect = 4e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 425 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456
Score = 44.4 bits (100), Expect = 4e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 501 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532
Score = 44.4 bits (100), Expect = 4e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 577 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 608
Score = 44.4 bits (100), Expect = 4e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 653 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 684
Score = 44.4 bits (100), Expect = 4e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 729 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 760
Score = 29.1 bits (62), Expect = 1.5
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIF 45
Score = 29.1 bits (62), Expect = 1.5
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIF 121
Score = 29.1 bits (62), Expect = 1.5
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIF 197
Score = 29.1 bits (62), Expect = 1.5
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIF 273
Score = 29.1 bits (62), Expect = 1.5
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIF 349
Score = 29.1 bits (62), Expect = 1.5
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIF 425
Score = 29.1 bits (62), Expect = 1.5
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIF 501
Score = 29.1 bits (62), Expect = 1.5
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIF 577
Score = 29.1 bits (62), Expect = 1.5
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIF 653
Score = 29.1 bits (62), Expect = 1.5
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIF 729
Score = 29.1 bits (62), Expect = 1.5
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIF 805
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 44.4 bits (100), Expect = 4e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 45 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 29.1 bits (62), Expect = 1.5
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIF 45
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 44.4 bits (100), Expect = 4e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 45 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 44.4 bits (100), Expect = 4e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
Score = 44.4 bits (100), Expect = 4e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 197 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
Score = 44.4 bits (100), Expect = 4e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 273 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
Score = 44.4 bits (100), Expect = 4e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 349 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
Score = 44.4 bits (100), Expect = 4e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 425 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456
Score = 29.1 bits (62), Expect = 1.5
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIF 45
Score = 29.1 bits (62), Expect = 1.5
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIF 121
Score = 29.1 bits (62), Expect = 1.5
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIF 197
Score = 29.1 bits (62), Expect = 1.5
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIF 273
Score = 29.1 bits (62), Expect = 1.5
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIF 349
Score = 29.1 bits (62), Expect = 1.5
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIF 501
Score = 26.6 bits (56), Expect = 8.2
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTL G GIPP QQRLIF
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIF 425
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 44.4 bits (100), Expect = 4e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 45 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 29.1 bits (62), Expect = 1.5
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIF 45
>Z99266-1|CAB16464.1| 292|Caenorhabditis elegans F15C11.2 protein.
Length = 292
Score = 28.7 bits (61), Expect = 2.0
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVL 335
++GK + DE+T +K+ G +HLV+
Sbjct: 52 YTGKILKDEETLTQHKIADGHTVHLVI 78
>Z98262-3|CAD44156.1| 454|Caenorhabditis elegans Hypothetical
protein F15C11.2c protein.
Length = 454
Score = 28.7 bits (61), Expect = 2.0
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVL 335
++GK + DE+T +K+ G +HLV+
Sbjct: 52 YTGKILKDEETLTQHKIADGHTVHLVI 78
>Z98262-2|CAD44155.1| 484|Caenorhabditis elegans Hypothetical
protein F15C11.2b protein.
Length = 484
Score = 28.7 bits (61), Expect = 2.0
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVL 335
++GK + DE+T +K+ G +HLV+
Sbjct: 52 YTGKILKDEETLTQHKIADGHTVHLVI 78
>Z98262-1|CAB10932.1| 502|Caenorhabditis elegans Hypothetical
protein F15C11.2a protein.
Length = 502
Score = 28.7 bits (61), Expect = 2.0
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVL 335
++GK + DE+T +K+ G +HLV+
Sbjct: 52 YTGKILKDEETLTQHKIADGHTVHLVI 78
>Z71260-4|CAD44116.1| 454|Caenorhabditis elegans Hypothetical
protein F15C11.2c protein.
Length = 454
Score = 28.7 bits (61), Expect = 2.0
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVL 335
++GK + DE+T +K+ G +HLV+
Sbjct: 52 YTGKILKDEETLTQHKIADGHTVHLVI 78
>Z71260-3|CAD44115.1| 484|Caenorhabditis elegans Hypothetical
protein F15C11.2b protein.
Length = 484
Score = 28.7 bits (61), Expect = 2.0
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVL 335
++GK + DE+T +K+ G +HLV+
Sbjct: 52 YTGKILKDEETLTQHKIADGHTVHLVI 78
>Z71260-2|CAA95799.1| 502|Caenorhabditis elegans Hypothetical
protein F15C11.2a protein.
Length = 502
Score = 28.7 bits (61), Expect = 2.0
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVL 335
++GK + DE+T +K+ G +HLV+
Sbjct: 52 YTGKILKDEETLTQHKIADGHTVHLVI 78
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 27.9 bits (59), Expect = 3.6
Identities = 15/46 (32%), Positives = 18/46 (39%)
Frame = +1
Query: 121 KMLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
K+ + VKTL G G+PP QQRLIF
Sbjct: 160 KLTVSVKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIF 205
>U21320-6|AAA62538.4| 234|Caenorhabditis elegans Hypothetical
protein K04G7.11 protein.
Length = 234
Score = 27.5 bits (58), Expect = 4.7
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +3
Query: 168 RYRTHRQSGKNQRKSRRKGRHSAAATASHFSGKQMNDEKTAQD 296
R H Q + R+S+ H A + K++ D K A+D
Sbjct: 37 RKENHEQVVEEDRRSKLPKNHEAKKERDQWQVKELQDRKAAED 79
>Z72509-2|CAA96646.1| 520|Caenorhabditis elegans Hypothetical
protein F32G8.2 protein.
Length = 520
Score = 27.1 bits (57), Expect = 6.2
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -2
Query: 335 QNKMKY*TSLNFVILSCLLIIHL 267
+N++K SL F ILSCLLII +
Sbjct: 6 KNQVKIFPSLIFAILSCLLIIFI 28
>AF074395-1|AAC26791.1| 365|Caenorhabditis elegans CET-1 protein.
Length = 365
Score = 27.1 bits (57), Expect = 6.2
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +3
Query: 168 RYRTHRQSGKNQRKSRRKGR 227
R + RQ+G ++RK+R+KGR
Sbjct: 233 RRKRSRQTGNSERKNRKKGR 252
>Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical
protein B0285.1 protein.
Length = 730
Score = 26.6 bits (56), Expect = 8.2
Identities = 11/36 (30%), Positives = 27/36 (75%)
Frame = +3
Query: 168 RYRTHRQSGKNQRKSRRKGRHSAAATASHFSGKQMN 275
++ + S K+++KSR++ +HS+++++S SG+ M+
Sbjct: 142 KHGDYGSSSKSKKKSRKRRKHSSSSSSS--SGEAMD 175
>U61952-4|AAK84529.1| 267|Caenorhabditis elegans Hypothetical
protein F42A9.7 protein.
Length = 267
Score = 26.6 bits (56), Expect = 8.2
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 174 RTHRQSGKNQRKSRRKGRHSAAATASHFSGKQMNDEKTAQDYK 302
R ++S K+++ SRR R + + S SGK K+ + K
Sbjct: 32 RKSQRSTKSRKSSRRSRRRNGRSRKSSRSGKSSRSSKSGRSSK 74
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,950,323
Number of Sequences: 27780
Number of extensions: 129590
Number of successful extensions: 503
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 502
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 777938954
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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