Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30116
(447 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g31340.1 68414.m03835 ubiquitin family protein contains INTER... 56 8e-09
At2g35635.1 68415.m04370 ubiquitin family protein contains INTER... 56 1e-08
At1g11980.1 68414.m01384 ubiquitin family protein similar to Cha... 47 7e-06
At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyu... 44 4e-05
At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677 44 5e-05
At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to GI:92... 44 5e-05
At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to GI:92... 44 5e-05
At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3) senescence... 44 5e-05
At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3) senescence... 44 5e-05
At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3) senescence... 44 5e-05
At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3) senescence... 44 5e-05
At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3) senescence... 44 5e-05
At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to GI:3... 44 5e-05
At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to GI:1... 44 5e-05
At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to GI:1... 44 5e-05
At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to GI:1... 44 5e-05
At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / ... 44 5e-05
At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / ... 44 5e-05
At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / ... 44 5e-05
At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / ... 44 5e-05
At1g65350.1 68414.m07413 polyubiquitin, putative similar to poly... 44 5e-05
At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to poly... 44 5e-05
At1g23410.1 68414.m02932 ubiquitin extension protein, putative /... 44 5e-05
At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to polyu... 42 1e-04
At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam ... 35 0.029
At1g64470.1 68414.m07309 ubiquitin family protein contains INTER... 33 0.088
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ... 31 0.47
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 30 0.62
At1g53950.1 68414.m06145 ubiquitin family protein contains INTER... 29 1.1
At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase fa... 27 5.8
At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase fa... 27 5.8
At5g53800.1 68418.m06685 expressed protein 27 7.6
At3g11520.1 68416.m01404 cyclin, putative (CYC2) similar to cycl... 27 7.6
>At1g31340.1 68414.m03835 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 156
Score = 56.4 bits (130), Expect = 8e-09
Identities = 23/32 (71%), Positives = 30/32 (93%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
++GKQ+ D+KTA+DY ++GGSVLHLVLALRGG
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 152
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 45 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 29.9 bits (64), Expect = 0.82
Identities = 17/44 (38%), Positives = 19/44 (43%)
Frame = +1
Query: 127 LIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
+IKVKTLTG GIPP QQRLI+
Sbjct: 78 MIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIY 121
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 45
>At2g35635.1 68415.m04370 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 154
Score = 56.0 bits (129), Expect = 1e-08
Identities = 23/32 (71%), Positives = 30/32 (93%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
++GKQ+ D+KTA+DY ++GGSVLHLVLALRGG
Sbjct: 121 YAGKQLADDKTAKDYAIEGGSVLHLVLALRGG 152
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 45 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 29.9 bits (64), Expect = 0.82
Identities = 17/44 (38%), Positives = 19/44 (43%)
Frame = +1
Query: 127 LIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
+IKVKTLTG GIPP QQRLI+
Sbjct: 78 MIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIY 121
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 45
>At1g11980.1 68414.m01384 ubiquitin family protein similar to Chain
A, Structure Of Ubiquitin-Like Protein, Rub1 GI:6729726
from [Arabidopsis thaliana]
Length = 78
Score = 46.8 bits (106), Expect = 7e-06
Identities = 20/32 (62%), Positives = 27/32 (84%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
++GKQ+ D+ TA+ Y ++ GSVLHLVLALRGG
Sbjct: 45 YTGKQLADDLTAKHYNLERGSVLHLVLALRGG 76
>At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to
polyubiquitin (ubq9) gene sequence GI:304120 from
[Arabidopsis thaliana]
Length = 322
Score = 44.4 bits (100), Expect = 4e-05
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ++D +T DY +Q S LHLVL LRGG
Sbjct: 123 FAGKQLDDGRTLADYNIQKESTLHLVLRLRGG 154
Score = 42.7 bits (96), Expect = 1e-04
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
FSGK ++D +T DY +Q S+LHL L LRGG
Sbjct: 47 FSGKLLDDGRTLADYSIQKDSILHLALRLRGG 78
Score = 40.7 bits (91), Expect = 4e-04
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL L GG
Sbjct: 199 FAGKQLEDGRTLADYNIQKESTLHLVLRLCGG 230
Score = 39.9 bits (89), Expect = 8e-04
Identities = 23/46 (50%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +3
Query: 255 FSGKQMNDEK-TAQDYKVQGGSVLHLVLALRGGE*SGL**FSFVFI 389
F+G+Q+ D T DY +Q S LHLVL LRGGE G F F+F+
Sbjct: 275 FAGEQLEDGYYTLADYNIQKESTLHLVLRLRGGECFG---FIFLFL 317
Score = 28.7 bits (61), Expect = 1.9
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG G+PP QQRLIF
Sbjct: 79 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIF 123
>At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677
Length = 382
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 45 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 349 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 380
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 45
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 121
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 197
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 273
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 349
>At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 45 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 45
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 121
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 197
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 273
>At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 45 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 45
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 121
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 197
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 273
>At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 312
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 45 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 45
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 121
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 197
>At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 45 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 349 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 380
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 45
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 121
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 197
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 273
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 349
>At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 45 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 45
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 121
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 197
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 273
>At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 45 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 349 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 380
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 45
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 121
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 197
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 273
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 349
>At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 45 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 45
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 121
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 197
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 273
>At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to
GI:304117
Length = 229
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 45 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 45
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 121
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 197
>At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 45 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 45
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 121
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 197
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 273
>At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 229
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 45 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 45
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 121
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 197
>At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 45 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 45
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 121
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 197
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 273
>At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / 40S
ribosomal protein S27A (RPS27aC) identical to GI:166933,
GI:166934
Length = 157
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 45 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 45
>At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / 60S
ribosomal protein L40 (RPL40B) identical to GI:166929,
GI:166930
Length = 128
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 45 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 45
>At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / 40S
ribosomal protein S27A (RPS27aB) identical to GI:166936
Length = 157
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 45 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 45
>At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / 60S
ribosomal protein L40 (RPL40A) identical to GI:166930,
GI:166931
Length = 128
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 45 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 45
>At1g65350.1 68414.m07413 polyubiquitin, putative similar to
polyubiquitin GI:248337 from [Zea mays]
Length = 294
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 45 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 196 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 227
Score = 36.7 bits (81), Expect = 0.007
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T D +Q S LHLVL LRGG
Sbjct: 121 FAGKQLEDGRTLAD-NIQKESTLHLVLRLRGG 151
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 45
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 121
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 228 MQIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIF 272
>At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to
polyubiquitin (ubq12) gene sequence GI:304121 from
[Arabidopsis thaliana]
Length = 230
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 42.3 bits (95), Expect = 1e-04
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ D +T DY +Q S LHLVL LRGG
Sbjct: 197 FAGKQHEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 41.9 bits (94), Expect = 2e-04
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY VQ S LHL+L RGG
Sbjct: 45 FAGKQLEDGRTLADYNVQEDSTLHLLLRFRGG 76
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIF 121
>At1g23410.1 68414.m02932 ubiquitin extension protein, putative /
40S ribosomal protein S27A (RPS27aA) strong similarity
to ubiquitin extension protein (UBQ5) GB:AAA32906
GI:166934 from (Arabidopsis thaliana)
Length = 156
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 45 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIF 258
M I VKTLTG GIPP QQRLIF
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 45
>At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to
polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis
thaliana] (Genetics 139 (2), 921-939 (1995))
Length = 631
Score = 42.3 bits (95), Expect = 1e-04
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D T DY +Q S LHLVL LRGG
Sbjct: 47 FAGKQLEDGLTLADYNIQKESTLHLVLRLRGG 78
Score = 40.7 bits (91), Expect = 4e-04
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F+GKQ+ D +T DY +Q S LHLVL L GG
Sbjct: 123 FAGKQLEDGRTLADYNIQKESTLHLVLRLCGG 154
Score = 32.7 bits (71), Expect = 0.12
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALR 344
F GK++ D T DY +Q S LHLVL ++
Sbjct: 365 FLGKELKDGCTLADYSIQKESTLHLVLGMQ 394
Score = 31.1 bits (67), Expect = 0.35
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F G Q+ D +T DY ++ S LHL +R G
Sbjct: 437 FRGGQLQDGRTLGDYNIRNESTLHLFFHIRHG 468
Score = 30.7 bits (66), Expect = 0.47
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 350
F G+ + +T DY +Q GS +H + RGG
Sbjct: 520 FGGRVLVGSRTLLDYNIQKGSTIHQLFLQRGG 551
Score = 29.5 bits (63), Expect = 1.1
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLALR 344
F G+Q+ D T DY + S L+LVL LR
Sbjct: 596 FFGQQLEDGVTLGDYDIHKKSTLYLVLRLR 625
>At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam
profile: PF00240 ubiquitin family
Length = 158
Score = 34.7 bits (76), Expect = 0.029
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3
Query: 255 FSGKQMNDEKTAQDYKVQGGSVLHLVLAL 341
F GKQ+ D T DY +Q S+LHL+ L
Sbjct: 130 FKGKQLEDGLTLADYNIQNDSILHLIKRL 158
>At1g64470.1 68414.m07309 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 213
Score = 33.1 bits (72), Expect = 0.088
Identities = 16/30 (53%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = +3
Query: 255 FSGKQM-NDEKTAQDYKVQGGSVLHLVLAL 341
FSG+++ + +DY V GGSVLHLVL L
Sbjct: 78 FSGRELARNASRVKDYGVTGGSVLHLVLKL 107
>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
bromodomain-containing protein low similarity to
SP|P51123 Transcription initiation factor TFIID 230 kDa
subunit {Drosophila melanogaster}; contains Pfam
profiles: PF00439 bromodomain, PF00240: Ubiquitin family
Length = 1700
Score = 30.7 bits (66), Expect = 0.47
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +3
Query: 174 RTHRQSGKNQRKSRRKGRHSAAATASHFSGKQMNDEKTAQDYKVQGGSVLHLV 332
R S + SR+ A + GK++ DEK+ + VQ S++HL+
Sbjct: 518 REESVSSLKAKASRKLDFKETEAVKMFYMGKELEDEKSLAEQNVQPNSLVHLL 570
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240:
Ubiquitin family
Length = 1919
Score = 30.3 bits (65), Expect = 0.62
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +3
Query: 189 SGKNQRKSRRKGRHSAAATASHFSGKQMNDEKTAQDYKVQGGSVLHLV 332
S + SR+ A + GK+++DEK+ VQ S++HL+
Sbjct: 684 SSLRAKASRKLDFKETEAVKMFYKGKELDDEKSLAAQNVQPNSLVHLI 731
>At1g53950.1 68414.m06145 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 216
Score = 29.5 bits (63), Expect = 1.1
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +1
Query: 124 MLIKVKTLTGXXXXXXXXXXXXXXXXXXXXXXXXGIPPQQQRLIFQ 261
M+I +KTLTG GIP +QQRLIFQ
Sbjct: 50 MMIFIKTLTGRTNTYEVKGSDTIRELKAKHEEKEGIPVEQQRLIFQ 95
>At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 27.1 bits (57), Expect = 5.8
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 255 FSGKQM-NDEKTAQDYKVQGGSVLHLVLAL 341
F G+++ +DY V G++LHLVL L
Sbjct: 78 FGGRELARSNSNMRDYGVSEGNILHLVLKL 107
>At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 27.1 bits (57), Expect = 5.8
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 255 FSGKQM-NDEKTAQDYKVQGGSVLHLVLAL 341
F G+++ +DY V G++LHLVL L
Sbjct: 78 FGGRELARSNSNMRDYGVSEGNILHLVLKL 107
>At5g53800.1 68418.m06685 expressed protein
Length = 351
Score = 26.6 bits (56), Expect = 7.6
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +3
Query: 156 RN*NRYRTHRQSGKNQRKSRRKGRHSAAATASHFSG-KQMNDEKTAQDYKVQGGSV 320
R R R R+ + +RK RR+ + S G K+ ++K + KV+ G+V
Sbjct: 131 RRRKRKRKEREEEEKERKRRRREKDKKKRNKSDKDGDKKRKEKKKKKSEKVKKGAV 186
>At3g11520.1 68416.m01404 cyclin, putative (CYC2) similar to cyclin
[Arabidopsis thaliana] GI:1360646; contains Pfam
profiles PF00134: Cyclin, N-terminal domain, PF02984:
Cyclin, C-terminal domain; identical to cDNA cyclin box
(cyc2) partial cds GI:456019
Length = 414
Score = 26.6 bits (56), Expect = 7.6
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +1
Query: 91 YITINNYNSFKMLIKVKTLTG 153
Y+T N+YNS ++L+ KT+ G
Sbjct: 260 YVTDNSYNSRQILVMEKTILG 280
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,253,547
Number of Sequences: 28952
Number of extensions: 115320
Number of successful extensions: 446
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 316
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 446
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 722638680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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