Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30115
         (636 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    25   0.53 
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    25   0.53 
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    23   2.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.5  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   6.5  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   6.5  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 25.0 bits (52), Expect = 0.53
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = +3

Query: 261 VIVRRGIRKKSHVLARIIAPIKSKYVSCHLLKIKKSIIQDKICLEIRT 404
           ++  R I   S +L+  +A     + +C +L   KSI+Q   CL   T
Sbjct: 215 IVSLRQIGSLSQLLSETVALFNDVFGTCLILITGKSIVQLLTCLNFIT 262


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 25.0 bits (52), Expect = 0.53
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = +3

Query: 261 VIVRRGIRKKSHVLARIIAPIKSKYVSCHLLKIKKSIIQDKICLEIRT 404
           ++  R I   S +L+  +A     + +C +L   KSI+Q   CL   T
Sbjct: 215 IVSLRQIGSLSQLLSETVALFNDVFGTCLILITGKSIVQLLTCLNFIT 262


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -3

Query: 124 KIL*SISFRTNIYTTLLFTIALLLVVMM 41
           K+L     R N+Y  LLF I +L V+ +
Sbjct: 88  KLLKGRKIRKNLYYLLLFVINVLYVLTL 115


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -3

Query: 88  YTTLLFTIALLLVVMMF 38
           Y  +LFT+ LLL+V ++
Sbjct: 243 YAFILFTVHLLLLVCIY 259


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -1

Query: 174 TFKNSKNNIEKRLVLQRKYYNQFHLELTSTQLYCLLLHY 58
           T  N +    K L++ + YY  F + + ST L   L HY
Sbjct: 202 TVSNFEYFQRKILLMIQLYYLYFDVIVISTFLQLFLEHY 240


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -1

Query: 174 TFKNSKNNIEKRLVLQRKYYNQFHLELTSTQLYCLLLHY 58
           T  N +    K L++ + YY  F + + ST L   L HY
Sbjct: 128 TVSNFEYFQRKILLMIQLYYLYFDVIVISTFLQLFLEHY 166


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,724
Number of Sequences: 336
Number of extensions: 2313
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)