Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30115
         (636 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68748-12|CAN86588.1|  792|Caenorhabditis elegans Hypothetical p...    30   1.6  
U80025-1|AAD32271.1| 1064|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z68748-10|CAL36500.1|  789|Caenorhabditis elegans Hypothetical p...    29   2.8  
Z68748-9|CAL36499.1|  796|Caenorhabditis elegans Hypothetical pr...    29   2.8  

>Z68748-12|CAN86588.1|  792|Caenorhabditis elegans Hypothetical
           protein F13H10.4c protein.
          Length = 792

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 21/56 (37%), Positives = 29/56 (51%)
 Frame = -2

Query: 434 F*TEKLNSL*RSNF*TNFVLNDRLFDF*KMTRNVFTLDWRYYTR*DMRFFSDSASN 267
           F TEKL  +    F TN +L  R ++F K   NVF L  + YT+  ++    S SN
Sbjct: 298 FRTEKLKGMKPEEF-TN-ILRIRSYNFNKKYENVFQLAGKNYTKTQLKMAKVSLSN 351


>U80025-1|AAD32271.1| 1064|Caenorhabditis elegans Hypothetical
           protein F02C9.3 protein.
          Length = 1064

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 20/67 (29%), Positives = 30/67 (44%)
 Frame = +3

Query: 114 YNIFSVKPIVFQYYFSSF*TLKTILGI*LSFMIYSKI*EVL*IWFKLGRVIVRRGIRKKS 293
           YNIFS  P+V    F  F  L  ++      +   KI  ++  WF LG ++    IR+  
Sbjct: 103 YNIFSFVPVVLFQEFKFFLNLYFLIMAFSQLVPIFKIGALVTYWFPLGFILTITLIREAI 162

Query: 294 HVLARII 314
              AR +
Sbjct: 163 EDFARFL 169


>Z68748-10|CAL36500.1|  789|Caenorhabditis elegans Hypothetical
           protein F13H10.4b protein.
          Length = 789

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 20/54 (37%), Positives = 28/54 (51%)
 Frame = -2

Query: 428 TEKLNSL*RSNF*TNFVLNDRLFDF*KMTRNVFTLDWRYYTR*DMRFFSDSASN 267
           TEKL  +    F TN +L  R ++F K   NVF L  + YT+  ++    S SN
Sbjct: 297 TEKLKGMKPEEF-TN-ILRIRSYNFNKKYENVFQLAGKNYTKTQLKMAKVSLSN 348


>Z68748-9|CAL36499.1|  796|Caenorhabditis elegans Hypothetical
           protein F13H10.4a protein.
          Length = 796

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 20/54 (37%), Positives = 28/54 (51%)
 Frame = -2

Query: 428 TEKLNSL*RSNF*TNFVLNDRLFDF*KMTRNVFTLDWRYYTR*DMRFFSDSASN 267
           TEKL  +    F TN +L  R ++F K   NVF L  + YT+  ++    S SN
Sbjct: 304 TEKLKGMKPEEF-TN-ILRIRSYNFNKKYENVFQLAGKNYTKTQLKMAKVSLSN 355


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,179,644
Number of Sequences: 27780
Number of extensions: 199559
Number of successful extensions: 339
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 339
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)