Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30111
(578 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_53343| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.68
SB_13545| Best HMM Match : Peptidase_M49 (HMM E-Value=0) 30 1.2
SB_28910| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 29 3.6
SB_24669| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_22561| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_18656| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_57588| Best HMM Match : Vicilin_N (HMM E-Value=1.4) 28 6.3
SB_56544| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_27470| Best HMM Match : Baculo_PEP_C (HMM E-Value=2.8) 28 6.3
SB_26806| Best HMM Match : Annexin (HMM E-Value=0) 27 8.4
>SB_53343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 779
Score = 31.1 bits (67), Expect = 0.68
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Frame = +2
Query: 101 KIVRSEFDASPDGAYNYNFETSNGIVRSETGELKEALDDDNKPHVIV--AVRGTTVTRTL 274
++ +SE +SP +Y+ F+++N E+ + K++ +NK V + + T +
Sbjct: 148 RVTKSESLSSPSNSYSQAFKSNNSR-EEESLDPKKSSGTENKSFETVKGSESRSKETPAV 206
Query: 275 TANLKPLRTSL 307
TAN+K LRT +
Sbjct: 207 TANIKELRTQI 217
>SB_13545| Best HMM Match : Peptidase_M49 (HMM E-Value=0)
Length = 488
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +2
Query: 113 SEFDASPDGAYNYNFETSNGIVRSETGE 196
+E DA PDG+YN++ ++ +V +ETGE
Sbjct: 218 TEEDAKPDGSYNFDHKS---VVNTETGE 242
>SB_28910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 80 PPTEDYPKIVRSEFDASPDGAY 145
PPT+DY + RS+ D S DG Y
Sbjct: 17 PPTKDYDRRSRSQDDDSDDGCY 38
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +2
Query: 197 LKEALDDDNKPHVIVAVRGTT---VTRTLTANLKPLR 298
+K+AL NKPHV++A G + T T NLK ++
Sbjct: 116 MKQALSLANKPHVVIATPGRLADHIKSTDTLNLKKIQ 152
>SB_24669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 164
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 118 IRRQPRWSLQLQFRDFQRHRA*RNW*AEGGSRRRQ 222
+RR+ WS+Q++ + RH + W GG ++R+
Sbjct: 3 VRRKDAWSMQVRQVEHPRHSYVQMWRKFGGPKKRE 37
>SB_22561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +2
Query: 116 EFDASPDGAYNYNFETSNGIVRSETGELKEALDDDNKPHVIVA 244
E D+ YNY+ NG+ S+ G+L DN HV+ A
Sbjct: 65 EPDSEQADGYNYDTSHHNGVATSQRGQLARLAMGDNN-HVLNA 106
>SB_18656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3292
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 214 RRQQASRYCCCAWNYSYTNTDG 279
R+ S Y C WNYS NT G
Sbjct: 2394 RQVNRSEYLCVFWNYSVPNTRG 2415
>SB_57588| Best HMM Match : Vicilin_N (HMM E-Value=1.4)
Length = 756
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 202 GGSRRRQQASRYCCCA 249
GGSRRR S++CC A
Sbjct: 97 GGSRRRNSKSKFCCFA 112
>SB_56544| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 937
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/47 (29%), Positives = 20/47 (42%)
Frame = +2
Query: 125 ASPDGAYNYNFETSNGIVRSETGELKEALDDDNKPHVIVAVRGTTVT 265
ASP N ET + E K +D N+PH+ + T +T
Sbjct: 502 ASPINMVNITIETDGRVESHEVFRAKLTVDTANRPHIELVTPLTEIT 548
>SB_27470| Best HMM Match : Baculo_PEP_C (HMM E-Value=2.8)
Length = 627
Score = 27.9 bits (59), Expect = 6.3
Identities = 22/58 (37%), Positives = 30/58 (51%)
Frame = +2
Query: 218 DNKPHVIVAVRGTTVTRTLTANLKPLRTSLTRLDTMLRVNLFLRSPPPRAKLLNSLDR 391
D P V+ R T+ R T L L ++TRLDT+LRV L + P L++L R
Sbjct: 135 DTLPRVVT--RLDTLPRVGT-RLDTLPRAVTRLDTLLRVGTRLDTLPRVVTRLDTLPR 189
>SB_26806| Best HMM Match : Annexin (HMM E-Value=0)
Length = 829
Score = 27.5 bits (58), Expect = 8.4
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = -2
Query: 226 LVVVVESLLQLTSFATHDAVGSLEIVVVSSIGAGVEFRPNDLRVVLCRGGSDDGSHKGES 47
LV ++S Q+T+ H A+ + + + V+ + AG + R+ L R S G + ES
Sbjct: 274 LVKAIQSPTQMTADKLHSALQNKDTLTVARMIAGADPTARFFRMRLARDTSATGVVECES 333
Query: 46 YND 38
+D
Sbjct: 334 ADD 336
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,683,031
Number of Sequences: 59808
Number of extensions: 300826
Number of successful extensions: 963
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 950
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1385833362
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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