Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30110X
(610 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X03636-1|CAA27285.1| 1127|Drosophila melanogaster per protein pr... 28 8.7
U19269-5|AAC46510.1| 1065|Drosophila melanogaster Dachshund vari... 28 8.7
U19269-4|AAC46509.1| 1072|Drosophila melanogaster Dachshund vari... 28 8.7
U19269-3|AAC46508.1| 1072|Drosophila melanogaster Dachshund vari... 28 8.7
U19269-2|AAC46507.1| 1074|Drosophila melanogaster Dachshund vari... 28 8.7
U19269-1|AAC46506.1| 1081|Drosophila melanogaster Dachshund prot... 28 8.7
M30114-3|AAA28753.1| 1176|Drosophila melanogaster biological clo... 28 8.7
M30114-1|AAA28754.1| 1218|Drosophila melanogaster biological clo... 28 8.7
D00009-1|BAA00007.1| 570|Drosophila melanogaster proteoglycan p... 28 8.7
AL024485-7|CAA19677.1| 1156|Drosophila melanogaster EG:155E2.4,F... 28 8.7
AL024485-4|CAA19678.1| 1212|Drosophila melanogaster EG:155E2.4,F... 28 8.7
AF033029-1|AAB87476.1| 1224|Drosophila melanogaster period clock... 28 8.7
AE014298-440|AAF45804.1| 1218|Drosophila melanogaster CG2647-PA ... 28 8.7
AE014134-2727|AAN10945.1| 1081|Drosophila melanogaster CG4952-PE... 28 8.7
AE014134-2726|AAN10944.1| 1081|Drosophila melanogaster CG4952-PB... 28 8.7
AE014134-2725|AAN10943.1| 1074|Drosophila melanogaster CG4952-PD... 28 8.7
AE014134-2724|AAX52668.1| 1072|Drosophila melanogaster CG4952-PF... 28 8.7
AE014134-2723|AAF53538.3| 1072|Drosophila melanogaster CG4952-PA... 28 8.7
AE014134-2722|AAN10942.1| 1065|Drosophila melanogaster CG4952-PC... 28 8.7
AE014134-2721|AAX52667.1| 1063|Drosophila melanogaster CG4952-PG... 28 8.7
>X03636-1|CAA27285.1| 1127|Drosophila melanogaster per protein
protein.
Length = 1127
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = -2
Query: 276 GAPQGCAGAGRVAPLAASDTSISVSGSQ--PAEHTTCPNRSICW 151
G P G G G AA+ S SV S P+ + TC W
Sbjct: 798 GTPGGAGGGGGAGAAAAAGASSSVGSSTPGPSSYPTCTQNINLW 841
>U19269-5|AAC46510.1| 1065|Drosophila melanogaster Dachshund variant
4 protein.
Length = 1065
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 142 AVVQEXAERPGGVAAQGPRVGGHALHAQP 56
A +Q A PG A P + H LHA+P
Sbjct: 377 AFMQMNAHHPGAAALMSPGMPPHGLHARP 405
>U19269-4|AAC46509.1| 1072|Drosophila melanogaster Dachshund variant
3 protein.
Length = 1072
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 142 AVVQEXAERPGGVAAQGPRVGGHALHAQP 56
A +Q A PG A P + H LHA+P
Sbjct: 384 AFMQMNAHHPGAAALMSPGMPPHGLHARP 412
>U19269-3|AAC46508.1| 1072|Drosophila melanogaster Dachshund variant
2 protein.
Length = 1072
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 142 AVVQEXAERPGGVAAQGPRVGGHALHAQP 56
A +Q A PG A P + H LHA+P
Sbjct: 384 AFMQMNAHHPGAAALMSPGMPPHGLHARP 412
>U19269-2|AAC46507.1| 1074|Drosophila melanogaster Dachshund variant
1 protein.
Length = 1074
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 142 AVVQEXAERPGGVAAQGPRVGGHALHAQP 56
A +Q A PG A P + H LHA+P
Sbjct: 386 AFMQMNAHHPGAAALMSPGMPPHGLHARP 414
>U19269-1|AAC46506.1| 1081|Drosophila melanogaster Dachshund
protein.
Length = 1081
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 142 AVVQEXAERPGGVAAQGPRVGGHALHAQP 56
A +Q A PG A P + H LHA+P
Sbjct: 393 AFMQMNAHHPGAAALMSPGMPPHGLHARP 421
>M30114-3|AAA28753.1| 1176|Drosophila melanogaster biological clock
protein C protein.
Length = 1176
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = -2
Query: 276 GAPQGCAGAGRVAPLAASDTSISVSGSQ--PAEHTTCPNRSICW 151
G P G G G AA+ S SV S P+ + TC W
Sbjct: 889 GTPGGAGGGGGAGAAAAAGASSSVGSSTPGPSSYPTCTQNINLW 932
>M30114-1|AAA28754.1| 1218|Drosophila melanogaster biological clock
protein A protein.
Length = 1218
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = -2
Query: 276 GAPQGCAGAGRVAPLAASDTSISVSGSQ--PAEHTTCPNRSICW 151
G P G G G AA+ S SV S P+ + TC W
Sbjct: 889 GTPGGAGGGGGAGAAAAAGASSSVGSSTPGPSSYPTCTQNINLW 932
>D00009-1|BAA00007.1| 570|Drosophila melanogaster proteoglycan
protein.
Length = 570
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = -2
Query: 276 GAPQGCAGAGRVAPLAASDTSISVSGSQ--PAEHTTCPNRSICW 151
G P G G G AA+ S SV S P+ + TC W
Sbjct: 390 GTPGGAGGGGGAGAAAAAGASSSVGSSTPGPSSYPTCTQNINLW 433
>AL024485-7|CAA19677.1| 1156|Drosophila melanogaster
EG:155E2.4,FBgn0003068;per protein.
Length = 1156
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = -2
Query: 276 GAPQGCAGAGRVAPLAASDTSISVSGSQ--PAEHTTCPNRSICW 151
G P G G G AA+ S SV S P+ + TC W
Sbjct: 821 GTPGGAGGGGGAGAAAAAGASSSVGSSTPGPSSYPTCTQNINLW 864
>AL024485-4|CAA19678.1| 1212|Drosophila melanogaster
EG:155E2.4,FBgn0003068;per protein.
Length = 1212
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = -2
Query: 276 GAPQGCAGAGRVAPLAASDTSISVSGSQ--PAEHTTCPNRSICW 151
G P G G G AA+ S SV S P+ + TC W
Sbjct: 883 GTPGGAGGGGGAGAAAAAGASSSVGSSTPGPSSYPTCTQNINLW 926
>AF033029-1|AAB87476.1| 1224|Drosophila melanogaster period clock
protein protein.
Length = 1224
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = -2
Query: 276 GAPQGCAGAGRVAPLAASDTSISVSGSQ--PAEHTTCPNRSICW 151
G P G G G AA+ S SV S P+ + TC W
Sbjct: 895 GTPGGAGGGGGAGAAAAAGASSSVGSSTPGPSSYPTCTQNINLW 938
>AE014298-440|AAF45804.1| 1218|Drosophila melanogaster CG2647-PA
protein.
Length = 1218
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = -2
Query: 276 GAPQGCAGAGRVAPLAASDTSISVSGSQ--PAEHTTCPNRSICW 151
G P G G G AA+ S SV S P+ + TC W
Sbjct: 889 GTPGGAGGGGGAGAAAAAGASSSVGSSTPGPSSYPTCTQNINLW 932
>AE014134-2727|AAN10945.1| 1081|Drosophila melanogaster CG4952-PE,
isoform E protein.
Length = 1081
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 142 AVVQEXAERPGGVAAQGPRVGGHALHAQP 56
A +Q A PG A P + H LHA+P
Sbjct: 393 AFMQMNAHHPGAAALMSPGMPPHGLHARP 421
>AE014134-2726|AAN10944.1| 1081|Drosophila melanogaster CG4952-PB,
isoform B protein.
Length = 1081
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 142 AVVQEXAERPGGVAAQGPRVGGHALHAQP 56
A +Q A PG A P + H LHA+P
Sbjct: 393 AFMQMNAHHPGAAALMSPGMPPHGLHARP 421
>AE014134-2725|AAN10943.1| 1074|Drosophila melanogaster CG4952-PD,
isoform D protein.
Length = 1074
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 142 AVVQEXAERPGGVAAQGPRVGGHALHAQP 56
A +Q A PG A P + H LHA+P
Sbjct: 386 AFMQMNAHHPGAAALMSPGMPPHGLHARP 414
>AE014134-2724|AAX52668.1| 1072|Drosophila melanogaster CG4952-PF,
isoform F protein.
Length = 1072
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 142 AVVQEXAERPGGVAAQGPRVGGHALHAQP 56
A +Q A PG A P + H LHA+P
Sbjct: 384 AFMQMNAHHPGAAALMSPGMPPHGLHARP 412
>AE014134-2723|AAF53538.3| 1072|Drosophila melanogaster CG4952-PA,
isoform A protein.
Length = 1072
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 142 AVVQEXAERPGGVAAQGPRVGGHALHAQP 56
A +Q A PG A P + H LHA+P
Sbjct: 384 AFMQMNAHHPGAAALMSPGMPPHGLHARP 412
>AE014134-2722|AAN10942.1| 1065|Drosophila melanogaster CG4952-PC,
isoform C protein.
Length = 1065
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 142 AVVQEXAERPGGVAAQGPRVGGHALHAQP 56
A +Q A PG A P + H LHA+P
Sbjct: 377 AFMQMNAHHPGAAALMSPGMPPHGLHARP 405
>AE014134-2721|AAX52667.1| 1063|Drosophila melanogaster CG4952-PG,
isoform G protein.
Length = 1063
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 142 AVVQEXAERPGGVAAQGPRVGGHALHAQP 56
A +Q A PG A P + H LHA+P
Sbjct: 375 AFMQMNAHHPGAAALMSPGMPPHGLHARP 403
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,973,226
Number of Sequences: 53049
Number of extensions: 296027
Number of successful extensions: 1106
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1106
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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