Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30110X
         (610 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    24   1.0  
AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.          21   7.1  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   7.1  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   7.1  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   7.1  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   9.4  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   9.4  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    21   9.4  

>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +2

Query: 461 AAKNQLSPSNYFIMNLRI 514
           AAK+  +PSN F++NL I
Sbjct: 75  AAKSLRTPSNMFVVNLAI 92


>AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.
          Length = 148

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +2

Query: 170 GHVVCSAGWEPETLIDVSDAASG 238
           G+V CS  WE    +  SD   G
Sbjct: 45  GNVSCSVSWEVHDPVTNSDTYIG 67


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = +3

Query: 36  RWCVWARG 59
           RWC W+ G
Sbjct: 387 RWCTWSEG 394


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = +3

Query: 36  RWCVWARG 59
           RWC W+ G
Sbjct: 387 RWCTWSEG 394


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = +3

Query: 36  RWCVWARG 59
           RWC W+ G
Sbjct: 387 RWCTWSEG 394


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = +3

Query: 63  ACRAWPPTRGPCA 101
           AC  W    GPCA
Sbjct: 610 ACDGWGGKAGPCA 622


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = +3

Query: 63  ACRAWPPTRGPCA 101
           AC  W    GPCA
Sbjct: 648 ACDGWGGKAGPCA 660


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +3

Query: 63  ACRAWPPTRG 92
           ACR WP  RG
Sbjct: 199 ACRFWPTGRG 208


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,505
Number of Sequences: 438
Number of extensions: 1664
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17971191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)