Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30109
         (801 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    29   0.033
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   2.8  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   3.7  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   5.0  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   5.0  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       22   5.0  

>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 29.5 bits (63), Expect = 0.033
 Identities = 17/71 (23%), Positives = 32/71 (45%)
 Frame = -3

Query: 631 FISKFRMYLREDLDSSFLNKRSSILEVIYYIGNSSLFSCIIKTCLYSAVAWEKLSSVWPL 452
           F++ F   + +  +S +L+K +++  V Y+I    L   ++  C Y   +W    S   L
Sbjct: 293 FLNNFYFIIFQVFESFYLHKATTLETVYYFISLGLLILRLVSVCFYG--SWINEESKLSL 350

Query: 451 SYRSTSPPTLY 419
              S  P  +Y
Sbjct: 351 DLLSYVPREVY 361


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = +2

Query: 200 CYKEDCLP 223
           CY+EDC+P
Sbjct: 83  CYREDCIP 90


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = -1

Query: 453 YHTGLHLRRHCIEVANAEHVDILVVQKKSW 364
           +HT + + R C+   N +  D L+   ++W
Sbjct: 475 WHTWMPVMRICVSAWNPKDCDPLITLIETW 504


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +1

Query: 130 AEVEQIAFSPSNLVPGIEPSPD 195
           A++ ++A SP++  P  EP P+
Sbjct: 20  AKIVKVAASPTSANPDEEPDPE 41


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +1

Query: 130 AEVEQIAFSPSNLVPGIEPSPD 195
           A++ ++A SP++  P  EP P+
Sbjct: 20  AKIVKVAASPTSANPDEEPDPE 41


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 12/51 (23%), Positives = 20/51 (39%)
 Frame = +1

Query: 40  FDLTKIWPHAEYPLIPVGKLVLDRNPKNYFAEVEQIAFSPSNLVPGIEPSP 192
           F   + W   E P  P     +   P+  +   E  +   +  + GI+PSP
Sbjct: 125 FTTERNWEIREKPYTPPRLPTVYGKPEQNYEVDESASVMTNGRIHGIQPSP 175


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,104
Number of Sequences: 336
Number of extensions: 4595
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21791490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)