Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30108
(387 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q2F837 Cluster: Eukaryotic translation elongation facto... 47 1e-04
UniRef50_Q5EMT9 Cluster: Elongation factor 1-alpha-like protein;... 46 3e-04
UniRef50_P13905 Cluster: Elongation factor 1-alpha; n=2224; cell... 46 3e-04
UniRef50_A7P6A6 Cluster: Chromosome chr9 scaffold_7, whole genom... 44 8e-04
UniRef50_Q05639 Cluster: Elongation factor 1-alpha 2; n=8397; ro... 44 8e-04
UniRef50_Q6WZ47 Cluster: Elongation factor-1 alpha; n=3; Coeloma... 42 0.005
UniRef50_P50257 Cluster: Elongation factor 1-alpha S; n=1; Porph... 41 0.010
UniRef50_A4VDD2 Cluster: Elongation factor 1-alpha; n=1; Tetrahy... 40 0.017
UniRef50_UPI0000EB0538 Cluster: UPI0000EB0538 related cluster; n... 40 0.022
UniRef50_UPI0000D9D957 Cluster: PREDICTED: similar to eukaryotic... 39 0.029
UniRef50_UPI0000F308E4 Cluster: UPI0000F308E4 related cluster; n... 36 0.27
UniRef50_UPI00006CC36B Cluster: Elongation factor Tu C-terminal ... 35 0.47
UniRef50_Q8IK94 Cluster: Putative uncharacterized protein; n=1; ... 34 0.83
UniRef50_A0EBW5 Cluster: Chromosome undetermined scaffold_89, wh... 34 0.83
UniRef50_P35021 Cluster: Elongation factor 1-alpha; n=53; cellul... 34 1.1
UniRef50_UPI0000EBC365 Cluster: PREDICTED: hypothetical protein;... 32 3.3
UniRef50_Q0JPL3 Cluster: Os01g0216700 protein; n=3; Oryza sativa... 32 4.4
UniRef50_O93729 Cluster: Elongation factor 1-alpha; n=20; Archae... 32 4.4
UniRef50_UPI0000499FCE Cluster: hypothetical protein 80.t00029; ... 31 5.8
UniRef50_Q0HN64 Cluster: O-antigen polymerase; n=1; Shewanella s... 31 7.7
UniRef50_Q22GX7 Cluster: Elongation factor Tu C-terminal domain ... 31 7.7
UniRef50_A7D4X8 Cluster: Translation elongation factor EF-1, sub... 31 7.7
>UniRef50_Q2F837 Cluster: Eukaryotic translation elongation factor 1
alpha 1; n=25; Coelomata|Rep: Eukaryotic translation
elongation factor 1 alpha 1 - Homo sapiens (Human)
Length = 93
Score = 47.2 bits (107), Expect = 1e-04
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = +3
Query: 3 PLGRFAVRDMRQTVAVGVIKAVN 71
PLGRFAVRDMRQTVAVGVIKAV+
Sbjct: 51 PLGRFAVRDMRQTVAVGVIKAVD 73
>UniRef50_Q5EMT9 Cluster: Elongation factor 1-alpha-like protein;
n=6; Fungi/Metazoa group|Rep: Elongation factor
1-alpha-like protein - Magnaporthe grisea (Rice blast
fungus) (Pyricularia grisea)
Length = 473
Score = 46.0 bits (104), Expect = 3e-04
Identities = 21/23 (91%), Positives = 23/23 (100%)
Frame = +3
Query: 3 PLGRFAVRDMRQTVAVGVIKAVN 71
PLGRFAVRDMRQTVAVGVIK+V+
Sbjct: 432 PLGRFAVRDMRQTVAVGVIKSVD 454
>UniRef50_P13905 Cluster: Elongation factor 1-alpha; n=2224;
cellular organisms|Rep: Elongation factor 1-alpha -
Arabidopsis thaliana (Mouse-ear cress)
Length = 449
Score = 46.0 bits (104), Expect = 3e-04
Identities = 21/23 (91%), Positives = 23/23 (100%)
Frame = +3
Query: 3 PLGRFAVRDMRQTVAVGVIKAVN 71
PLGRFAVRDMRQTVAVGVIK+V+
Sbjct: 408 PLGRFAVRDMRQTVAVGVIKSVD 430
>UniRef50_A7P6A6 Cluster: Chromosome chr9 scaffold_7, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr9 scaffold_7, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 154
Score = 44.4 bits (100), Expect = 8e-04
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = +3
Query: 3 PLGRFAVRDMRQTVAVGVIKAV 68
PLGRFAVRDMRQTVAVGVIK V
Sbjct: 121 PLGRFAVRDMRQTVAVGVIKNV 142
>UniRef50_Q05639 Cluster: Elongation factor 1-alpha 2; n=8397;
root|Rep: Elongation factor 1-alpha 2 - Homo sapiens
(Human)
Length = 463
Score = 44.4 bits (100), Expect = 8e-04
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = +3
Query: 3 PLGRFAVRDMRQTVAVGVIKAV 68
PLGRFAVRDMRQTVAVGVIK V
Sbjct: 420 PLGRFAVRDMRQTVAVGVIKNV 441
>UniRef50_Q6WZ47 Cluster: Elongation factor-1 alpha; n=3;
Coelomata|Rep: Elongation factor-1 alpha - Anduzedoras
oxyrhynchus
Length = 257
Score = 41.5 bits (93), Expect = 0.005
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = +3
Query: 3 PLGRFAVRDMRQTVAVGVIKAVN 71
P GRFA RDMRQTVAVGVIK+V+
Sbjct: 233 PPGRFAARDMRQTVAVGVIKSVD 255
>UniRef50_P50257 Cluster: Elongation factor 1-alpha S; n=1; Porphyra
purpurea|Rep: Elongation factor 1-alpha S - Porphyra
purpurea
Length = 515
Score = 40.7 bits (91), Expect = 0.010
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = +3
Query: 3 PLGRFAVRDMRQTVAVGVIKAV 68
PLGRFAVRDM++TVAVGVI+ V
Sbjct: 453 PLGRFAVRDMKKTVAVGVIQCV 474
>UniRef50_A4VDD2 Cluster: Elongation factor 1-alpha; n=1;
Tetrahymena thermophila SB210|Rep: Elongation factor
1-alpha - Tetrahymena thermophila SB210
Length = 356
Score = 39.9 bits (89), Expect = 0.017
Identities = 15/24 (62%), Positives = 21/24 (87%)
Frame = +3
Query: 3 PLGRFAVRDMRQTVAVGVIKAVNF 74
PLGRF +RDM+ VA+G+IK+VN+
Sbjct: 332 PLGRFIIRDMKVVVAIGIIKSVNY 355
>UniRef50_UPI0000EB0538 Cluster: UPI0000EB0538 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB0538 UniRef100
entry - Canis familiaris
Length = 357
Score = 39.5 bits (88), Expect = 0.022
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +3
Query: 6 LGRFAVRDMRQTVAVGVIKAVN 71
LGRFAV DMRQTVAVGVI+AV+
Sbjct: 315 LGRFAVCDMRQTVAVGVIQAVD 336
>UniRef50_UPI0000D9D957 Cluster: PREDICTED: similar to eukaryotic
translation elongation factor 1 alpha 2; n=1; Macaca
mulatta|Rep: PREDICTED: similar to eukaryotic
translation elongation factor 1 alpha 2 - Macaca mulatta
Length = 151
Score = 39.1 bits (87), Expect = 0.029
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = +3
Query: 3 PLGRFAVRDMRQTVAVGVIKAVN 71
PLG FAV DMRQTVA GVIKAV+
Sbjct: 107 PLGCFAVCDMRQTVATGVIKAVD 129
>UniRef50_UPI0000F308E4 Cluster: UPI0000F308E4 related cluster; n=3;
Laurasiatheria|Rep: UPI0000F308E4 UniRef100 entry - Bos
Taurus
Length = 428
Score = 35.9 bits (79), Expect = 0.27
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = +3
Query: 3 PLGRFAVRDMRQTVAVGVIKAVN 71
PLG FAVRD QTV GVIKAV+
Sbjct: 386 PLGHFAVRDTWQTVPAGVIKAVD 408
>UniRef50_UPI00006CC36B Cluster: Elongation factor Tu C-terminal
domain containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Elongation factor Tu C-terminal domain
containing protein - Tetrahymena thermophila SB210
Length = 441
Score = 35.1 bits (77), Expect = 0.47
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = +3
Query: 3 PLGRFAVRDMRQTVAVGVIKAV 68
PLGRF VRDM VA+G+IK V
Sbjct: 416 PLGRFIVRDMNTIVAIGIIKEV 437
>UniRef50_Q8IK94 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 2943
Score = 34.3 bits (75), Expect = 0.83
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +1
Query: 208 KKGYKLIPFLYFLQGFNVTLFYNLYKVIHNISETFCYDCKLKCKFI 345
KK YK I +Y QG N L+ N+ ++ +TF + KLK F+
Sbjct: 2640 KKAYKKIDSMYKKQGINDILYKNINEINEYFDKTFLKNKKLKINFM 2685
>UniRef50_A0EBW5 Cluster: Chromosome undetermined scaffold_89, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_89,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 993
Score = 34.3 bits (75), Expect = 0.83
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +1
Query: 172 CDTSFTERCFEGKKGYKLIPFLYFLQGFNVTLFYNLYKVIHNISETFCYDCKLKC 336
C++++ + C EG YKL ++ LQ F + N Y +IS YD +KC
Sbjct: 807 CNSNYAKYCIEGDF-YKLDSWMQLLQSFLMQFLPNRYMYSESISIFTNYDLPIKC 860
>UniRef50_P35021 Cluster: Elongation factor 1-alpha; n=53; cellular
organisms|Rep: Elongation factor 1-alpha - Sulfolobus
solfataricus
Length = 435
Score = 33.9 bits (74), Expect = 1.1
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +3
Query: 3 PLGRFAVRDMRQTVAVGVI 59
PLGRFA+RDM +TV VG+I
Sbjct: 406 PLGRFAMRDMGKTVGVGII 424
>UniRef50_UPI0000EBC365 Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 217
Score = 32.3 bits (70), Expect = 3.3
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +3
Query: 9 GRFAVRDMRQTVAVGVIKAV 68
GRFA +DMRQTVAV VI A+
Sbjct: 186 GRFATQDMRQTVAVTVIIAI 205
>UniRef50_Q0JPL3 Cluster: Os01g0216700 protein; n=3; Oryza sativa
(japonica cultivar-group)|Rep: Os01g0216700 protein -
Oryza sativa subsp. japonica (Rice)
Length = 353
Score = 31.9 bits (69), Expect = 4.4
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = -3
Query: 148 NSSSYFLPLVAFSAALVTLPPPASLKLTALMTPTATVCLMSRTAKRP 8
N ++ P A +A +V PP S + T + +P A++CL+ + +RP
Sbjct: 190 NGTTASKPREAAAAPVVGWPPVRSFRRTRVRSPPASLCLLRCSPRRP 236
>UniRef50_O93729 Cluster: Elongation factor 1-alpha; n=20;
Archaea|Rep: Elongation factor 1-alpha - Pyrobaculum
aerophilum
Length = 444
Score = 31.9 bits (69), Expect = 4.4
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +3
Query: 3 PLGRFAVRDMRQTVAVGVIKAV 68
PLGRFA+RDM +T+A G I V
Sbjct: 415 PLGRFALRDMGRTIAAGQILEV 436
>UniRef50_UPI0000499FCE Cluster: hypothetical protein 80.t00029;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 80.t00029 - Entamoeba histolytica HM-1:IMSS
Length = 716
Score = 31.5 bits (68), Expect = 5.8
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +1
Query: 223 LIPFLYFLQGFNVTLFYNLYKVIHNISETFCYDCKLKCKFIE 348
L+P YFL+ + T L K+I+ + FC DC++K IE
Sbjct: 655 LLPICYFLEKNDCTQ-EELLKLINTLKTIFCEDCQIKQTEIE 695
>UniRef50_Q0HN64 Cluster: O-antigen polymerase; n=1; Shewanella sp.
MR-4|Rep: O-antigen polymerase - Shewanella sp. (strain
MR-4)
Length = 557
Score = 31.1 bits (67), Expect = 7.7
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -3
Query: 142 SSYFLPLVAFSAALVTLPPPASLKLTALMTPTATVC 35
++Y + AF TLP + KLTAL+ P T+C
Sbjct: 398 TAYMIEKSAFIEKKTTLPQALNFKLTALIIPALTLC 433
>UniRef50_Q22GX7 Cluster: Elongation factor Tu C-terminal domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Elongation factor Tu C-terminal domain
containing protein - Tetrahymena thermophila SB210
Length = 432
Score = 31.1 bits (67), Expect = 7.7
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 3 PLGRFAVRDMRQTVAVGVIKAV 68
PLGRF ++D QT AVG+++ V
Sbjct: 405 PLGRFILKDSDQTTAVGIVQKV 426
>UniRef50_A7D4X8 Cluster: Translation elongation factor EF-1,
subunit alpha; n=1; Halorubrum lacusprofundi ATCC
49239|Rep: Translation elongation factor EF-1, subunit
alpha - Halorubrum lacusprofundi ATCC 49239
Length = 540
Score = 31.1 bits (67), Expect = 7.7
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +3
Query: 6 LGRFAVRDMRQTVAVGVIKAVN 71
LG FA+RDM QT+A G + VN
Sbjct: 517 LGSFAIRDMGQTIAAGKVLEVN 538
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 274,274,301
Number of Sequences: 1657284
Number of extensions: 4209066
Number of successful extensions: 12537
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 12259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12534
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 15718494179
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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