Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30107
         (439 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    25   0.42 
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    24   0.55 
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    23   0.96 
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    23   0.96 
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    23   1.3  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    22   2.2  
DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory pro...    22   2.2  
AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical pro...    22   2.2  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    22   2.9  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   6.8  

>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 24.6 bits (51), Expect = 0.42
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = -3

Query: 323 TNCARCVPKDKAIKKFVIRNIVERRR 246
           T+CA+C  K K   K VI+++ + ++
Sbjct: 72  TSCAKCTDKQKQGAKTVIQHLYKNKQ 97


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 24.2 bits (50), Expect = 0.55
 Identities = 7/25 (28%), Positives = 16/25 (64%)
 Frame = -3

Query: 323 TNCARCVPKDKAIKKFVIRNIVERR 249
           T+C++C  K K    F++R +++ +
Sbjct: 75  TDCSKCSEKQKEGSDFIMRYLIDNK 99


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 23.4 bits (48), Expect = 0.96
 Identities = 7/26 (26%), Positives = 17/26 (65%)
 Frame = -3

Query: 323 TNCARCVPKDKAIKKFVIRNIVERRR 246
           T+C++C  + K   + +IR +++ +R
Sbjct: 71  TSCSKCSQRQKDGSRTIIRYLIKNKR 96


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 23.4 bits (48), Expect = 0.96
 Identities = 8/33 (24%), Positives = 18/33 (54%)
 Frame = -3

Query: 344 HVKAVRCTNCARCVPKDKAIKKFVIRNIVERRR 246
           H+     T C++C    K   K ++R++++ +R
Sbjct: 66  HLPDALHTECSKCSETQKNGSKKIMRHLIDHKR 98


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = -3

Query: 323 TNCARCVPKDKAIKKFVIRNIVERR 249
           T+CA+C  K KA  + V+ ++++ +
Sbjct: 68  TDCAKCNEKVKANVRKVLHHLIDNK 92


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -3

Query: 317 CARCVPKDKAIKKFVIRNIVERRRS 243
           CA+C  K K   + VIR++++ + S
Sbjct: 71  CAKCNEKHKEGVRKVIRHLIKNKPS 95


>DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory
           protein 2 protein.
          Length = 122

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -3

Query: 323 TNCARCVPKDKAIKKFVIRNIVERRRSE 240
           T C +C    K   + VIR +++ R S+
Sbjct: 70  TGCRKCNDHQKVSVEKVIRFLIKERNSD 97


>AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical
           protein protein.
          Length = 122

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -3

Query: 323 TNCARCVPKDKAIKKFVIRNIVERRRSE 240
           T C +C    K   + VIR +++ R S+
Sbjct: 70  TGCRKCNDHQKVSVEKVIRFLIKERNSD 97


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 6/26 (23%), Positives = 17/26 (65%)
 Frame = -3

Query: 323 TNCARCVPKDKAIKKFVIRNIVERRR 246
           T+C++C  + +   + +IR +++ +R
Sbjct: 71  TSCSKCSQRQQDGSRTIIRYLIKNKR 96


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -3

Query: 323 TNCARCVPKDK 291
           TNCA+C  K +
Sbjct: 70  TNCAKCTEKQR 80


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,379
Number of Sequences: 336
Number of extensions: 1696
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9775509
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)