Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30106
         (762 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    26   1.5  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           25   2.5  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    25   2.5  
AY578804-1|AAT07309.1|  133|Anopheles gambiae maverick protein.        24   4.5  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          24   5.9  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    24   5.9  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   7.8  
AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein p...    23   7.8  

>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 14/63 (22%)
 Frame = -3

Query: 685 SCRPNGKQSTSPKTRHYGSSRSINGAF--------------RYHKHWSPSSPNPSLATKG 548
           SC PN  Q+T+      GS  S N  +               +  H+SP S NP LA  G
Sbjct: 19  SCYPNNSQNTNSSPNTAGSQGSQNDGYFPPSTYAPNIYPGTPHQAHYSPQSYNP-LAGAG 77

Query: 547 STS 539
           +TS
Sbjct: 78  ATS 80


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
 Frame = -3

Query: 586  SPSSPNPSLATKGSTSKLTHRH---SPLSSRR 500
            SP+SP PS  +K   S    RH   SPL +RR
Sbjct: 1462 SPASPTPSKKSKRHQSASPIRHILNSPLLNRR 1493


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 598 HKHWSPSSPNPSLATKGSTSKLTHRH 521
           H H SP   +P + +  + + LTH H
Sbjct: 473 HSHHSPHHVSPGMGSTVNGASLTHSH 498


>AY578804-1|AAT07309.1|  133|Anopheles gambiae maverick protein.
          Length = 133

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 51  RSSRNKPKPVKPTKRPSLSPEGTATKTSGVRR 146
           R  R+K +  +P  R  LSP  T   T+G +R
Sbjct: 1   REKRSKLQRYRPQMRDYLSPPKTTACTAGNKR 32


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 9/34 (26%), Positives = 20/34 (58%)
 Frame = -3

Query: 631 SSRSINGAFRYHKHWSPSSPNPSLATKGSTSKLT 530
           + R +  + + H+H S + P P+ +T G++ + T
Sbjct: 779 AERELIMSVQRHQHQSLAYPRPARSTTGASERFT 812


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = -3

Query: 583 PSSPNPSLATKGSTSKLTHRHSPLSSRRIFSVGRVS-DPVV 464
           PS+PN  +  K  T+ L  +  P       SV R+S  PVV
Sbjct: 190 PSAPNQQIIYKEQTANLQVQKVPAFQAMPESVSRISTGPVV 230


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
            gambiae T1 retroposon. ).
          Length = 975

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 12/44 (27%), Positives = 19/44 (43%)
 Frame = -3

Query: 718  VKSATALIPARSCRPNGKQSTSPKTRHYGSSRSINGAFRYHKHW 587
            + S +  +P+RS RP    S   +   Y  +  I   FR   H+
Sbjct: 909  LSSISLYVPSRSLRPRDPLSIETRHTLYTFNDPILSCFRLFNHF 952


>AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein
           protein.
          Length = 499

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 217 REIRSDPPEKEMVG 176
           RE++S+PPE  M G
Sbjct: 170 REVQSEPPETPMTG 183


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 720,584
Number of Sequences: 2352
Number of extensions: 13790
Number of successful extensions: 63
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79002570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)