Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30106
         (762 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z22176-13|CAO82058.1| 1185|Caenorhabditis elegans Hypothetical p...    35   0.073
Z22176-12|CAO82057.1|  546|Caenorhabditis elegans Hypothetical p...    35   0.073
Z22176-10|CAD45611.1| 1157|Caenorhabditis elegans Hypothetical p...    35   0.073
Z22176-9|CAA80140.1| 1139|Caenorhabditis elegans Hypothetical pr...    35   0.073
AF424978-1|AAL23934.1| 1157|Caenorhabditis elegans UNC-16 protein.     35   0.073
AL032631-7|CAB63337.2|  855|Caenorhabditis elegans Hypothetical ...    33   0.17 
AC024791-2|AAK95891.1|  604|Caenorhabditis elegans Temporarily a...    31   1.2  
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr...    29   3.6  
U50135-2|AAM98043.1| 1584|Caenorhabditis elegans Uncoordinated p...    29   3.6  
U50135-1|AAM98044.2| 1628|Caenorhabditis elegans Uncoordinated p...    29   3.6  
M58582-1|AAA03517.1| 1584|Caenorhabditis elegans kinesin-related...    29   3.6  
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr...    29   4.8  
AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical...    29   4.8  
AC024813-3|AAK27881.1|  461|Caenorhabditis elegans Est (ever sho...    29   4.8  
AC024813-2|ABE73329.1| 1027|Caenorhabditis elegans Est (ever sho...    29   4.8  
AC024813-1|AAK27880.3| 1241|Caenorhabditis elegans Est (ever sho...    29   4.8  
U23139-8|AAK31491.2| 1051|Caenorhabditis elegans Biotin protein ...    28   6.3  
AL034392-5|CAE17989.1|  134|Caenorhabditis elegans Hypothetical ...    28   6.3  

>Z22176-13|CAO82058.1| 1185|Caenorhabditis elegans Hypothetical
            protein ZK1098.10d protein.
          Length = 1185

 Score = 34.7 bits (76), Expect = 0.073
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
 Frame = +2

Query: 47   AEKLQKQAETSQTNKETLVISGGDGYEDFR-----SSTMTEDAGREDSTNHLLLWRV 202
            A K  +      T +  L++SGGDGY DFR        +T  + R    +HL++W V
Sbjct: 1120 ASKNGEDESAEVTLRRMLIMSGGDGYIDFRIGEENEPELTGQSIRPRDMSHLIIWEV 1176


>Z22176-12|CAO82057.1|  546|Caenorhabditis elegans Hypothetical
           protein ZK1098.10c protein.
          Length = 546

 Score = 34.7 bits (76), Expect = 0.073
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
 Frame = +2

Query: 47  AEKLQKQAETSQTNKETLVISGGDGYEDFR-----SSTMTEDAGREDSTNHLLLWRV 202
           A K  +      T +  L++SGGDGY DFR        +T  + R    +HL++W V
Sbjct: 481 ASKNGEDESAEVTLRRMLIMSGGDGYIDFRIGEENEPELTGQSIRPRDMSHLIIWEV 537


>Z22176-10|CAD45611.1| 1157|Caenorhabditis elegans Hypothetical
            protein ZK1098.10b protein.
          Length = 1157

 Score = 34.7 bits (76), Expect = 0.073
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
 Frame = +2

Query: 47   AEKLQKQAETSQTNKETLVISGGDGYEDFR-----SSTMTEDAGREDSTNHLLLWRV 202
            A K  +      T +  L++SGGDGY DFR        +T  + R    +HL++W V
Sbjct: 1092 ASKNGEDESAEVTLRRMLIMSGGDGYIDFRIGEENEPELTGQSIRPRDMSHLIIWEV 1148


>Z22176-9|CAA80140.1| 1139|Caenorhabditis elegans Hypothetical protein
            ZK1098.10a protein.
          Length = 1139

 Score = 34.7 bits (76), Expect = 0.073
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
 Frame = +2

Query: 47   AEKLQKQAETSQTNKETLVISGGDGYEDFR-----SSTMTEDAGREDSTNHLLLWRV 202
            A K  +      T +  L++SGGDGY DFR        +T  + R    +HL++W V
Sbjct: 1074 ASKNGEDESAEVTLRRMLIMSGGDGYIDFRIGEENEPELTGQSIRPRDMSHLIIWEV 1130


>AF424978-1|AAL23934.1| 1157|Caenorhabditis elegans UNC-16 protein.
          Length = 1157

 Score = 34.7 bits (76), Expect = 0.073
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
 Frame = +2

Query: 47   AEKLQKQAETSQTNKETLVISGGDGYEDFR-----SSTMTEDAGREDSTNHLLLWRV 202
            A K  +      T +  L++SGGDGY DFR        +T  + R    +HL++W V
Sbjct: 1092 ASKNGEDESAEVTLRRMLIMSGGDGYIDFRIGEENEPELTGQSIRPRDMSHLIIWEV 1148


>AL032631-7|CAB63337.2|  855|Caenorhabditis elegans Hypothetical
           protein Y106G6H.5 protein.
          Length = 855

 Score = 33.5 bits (73), Expect = 0.17
 Identities = 16/61 (26%), Positives = 30/61 (49%)
 Frame = -3

Query: 280 GHSTVKSLRFLCVASLQNPVGREIRSDPPEKEMVGGVLSPCVLGHRRTPEVFVAVPSGDN 101
           G   V+ L+FLC A++  P+G  + +    ++  GG ++ C L      + F+  P+   
Sbjct: 525 GEDAVEYLQFLCSANVDEPIGTTVYTGMQHQK--GGYVTDCTLSRLGEKKFFMVAPTIQQ 582

Query: 100 E 98
           E
Sbjct: 583 E 583


>AC024791-2|AAK95891.1|  604|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 63 protein.
          Length = 604

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 17/71 (23%), Positives = 33/71 (46%)
 Frame = -3

Query: 730 SKTRVKSATALIPARSCRPNGKQSTSPKTRHYGSSRSINGAFRYHKHWSPSSPNPSLATK 551
           +K  + +   LI +    P  K++T P + +    R+++ + +  K  SP+  +PS+ T 
Sbjct: 355 AKLEISTPKPLISSSLAEPENKENTKPNSPYSLRKRAVDSSKKPGKSDSPAVSSPSITTP 414

Query: 550 GSTSKLTHRHS 518
             T     R S
Sbjct: 415 VPTRPTRLRKS 425


>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
            K06A9.1b protein.
          Length = 2232

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 19/49 (38%), Positives = 24/49 (48%)
 Frame = -3

Query: 685  SCRPNGKQSTSPKTRHYGSSRSINGAFRYHKHWSPSSPNPSLATKGSTS 539
            S  PN  QSTSP T    SS   +G        SPS  +   +++GSTS
Sbjct: 1091 STSPNPSQSTSPSTSGATSSPGSSGTTLTSISPSPSQSSTIGSSQGSTS 1139


>U50135-2|AAM98043.1| 1584|Caenorhabditis elegans Uncoordinated
           protein 104, isoforma protein.
          Length = 1584

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 17/44 (38%), Positives = 20/44 (45%)
 Frame = -3

Query: 694 PARSCRPNGKQSTSPKTRHYGSSRSINGAFRYHKHWSPSSPNPS 563
           P  SC  NGKQ T+P   H G SR I G     ++  P     S
Sbjct: 529 PNASCYINGKQVTTPTVLHTG-SRVILGEHHVFRYNDPQEARQS 571


>U50135-1|AAM98044.2| 1628|Caenorhabditis elegans Uncoordinated
           protein 104, isoformb protein.
          Length = 1628

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 17/44 (38%), Positives = 20/44 (45%)
 Frame = -3

Query: 694 PARSCRPNGKQSTSPKTRHYGSSRSINGAFRYHKHWSPSSPNPS 563
           P  SC  NGKQ T+P   H G SR I G     ++  P     S
Sbjct: 529 PNASCYINGKQVTTPTVLHTG-SRVILGEHHVFRYNDPQEARQS 571


>M58582-1|AAA03517.1| 1584|Caenorhabditis elegans kinesin-related
           protein protein.
          Length = 1584

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 17/44 (38%), Positives = 20/44 (45%)
 Frame = -3

Query: 694 PARSCRPNGKQSTSPKTRHYGSSRSINGAFRYHKHWSPSSPNPS 563
           P  SC  NGKQ T+P   H G SR I G     ++  P     S
Sbjct: 529 PNASCYINGKQVTTPTVLHTG-SRVILGEHHVFRYNDPQEARQS 571


>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical
           protein W01F3.3 protein.
          Length = 2175

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 20/81 (24%), Positives = 37/81 (45%)
 Frame = +3

Query: 87  TKRPSLSPEGTATKTSGVRR*PRTQGERTPPTISFSGGSERISRPTGFCNDATQRNLRDL 266
           T+ P+ + E T T+T+ +     T  ER  P+ + +  +   ++PT   +  TQR     
Sbjct: 269 TEAPTTTEEVTTTETT-IEAQTTTTTERMSPSTTKTS-TTTTAKPTTTRSTTTQRPQTVA 326

Query: 267 TVECPARNSIKHTRATASRNQ 329
           T E P   +++     A R +
Sbjct: 327 TTEAPTTTTVEDVTTRAPRTE 347


>AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical
           protein Y111B2A.14 protein.
          Length = 1481

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = -3

Query: 739 AAASKTRVKSATALIPARSCRPNGKQSTSPKTRHYGSSRSINGAFR 602
           +A +  +  S+TAL P+ S  P+ +QSTS       SS S   A R
Sbjct: 818 SAPATPKASSSTALRPSTSSTPSQQQSTSTAKAMTSSSTSAEDAKR 863


>AC024813-3|AAK27881.1|  461|Caenorhabditis elegans Est (ever
           shorter telomeres) homologprotein 1, isoform b protein.
          Length = 461

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
 Frame = +3

Query: 33  DARLTQRSSRNKPKPVKPTKRPSLSPEGTATK----TSGVRR*PRTQGERTPPTISFSGG 200
           DA  ++  +  KP+P     RP +  +G +TK    T+   R PR +   T  T + SG 
Sbjct: 6   DASSSRTGAPRKPRPEIQIYRPGMLRQGGSTKSLSSTNEEARPPRPEKLNT-TTTTMSGN 64

Query: 201 SERISRPT 224
           S R S  T
Sbjct: 65  SRRRSNDT 72


>AC024813-2|ABE73329.1| 1027|Caenorhabditis elegans Est (ever
           shorter telomeres) homologprotein 1, isoform c protein.
          Length = 1027

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
 Frame = +3

Query: 33  DARLTQRSSRNKPKPVKPTKRPSLSPEGTATK----TSGVRR*PRTQGERTPPTISFSGG 200
           DA  ++  +  KP+P     RP +  +G +TK    T+   R PR +   T  T + SG 
Sbjct: 6   DASSSRTGAPRKPRPEIQIYRPGMLRQGGSTKSLSSTNEEARPPRPEKLNT-TTTTMSGN 64

Query: 201 SERISRPT 224
           S R S  T
Sbjct: 65  SRRRSNDT 72


>AC024813-1|AAK27880.3| 1241|Caenorhabditis elegans Est (ever
           shorter telomeres) homologprotein 1, isoform a protein.
          Length = 1241

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
 Frame = +3

Query: 33  DARLTQRSSRNKPKPVKPTKRPSLSPEGTATK----TSGVRR*PRTQGERTPPTISFSGG 200
           DA  ++  +  KP+P     RP +  +G +TK    T+   R PR +   T  T + SG 
Sbjct: 6   DASSSRTGAPRKPRPEIQIYRPGMLRQGGSTKSLSSTNEEARPPRPEKLNT-TTTTMSGN 64

Query: 201 SERISRPT 224
           S R S  T
Sbjct: 65  SRRRSNDT 72


>U23139-8|AAK31491.2| 1051|Caenorhabditis elegans Biotin protein
           ligase protein 1,isoform a protein.
          Length = 1051

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
 Frame = -3

Query: 736 AASKTRVKSATALIPARSCRPNGKQSTSPKTRHYGSSRSINGAFRYHKHWS----PSSPN 569
           A    R K +T+++ A + R N ++  S  +      RS++ +F Y+++ S     S+ N
Sbjct: 406 AQQTARSKRSTSVV-ANNNRQNSQRRFSAFSTESDRGRSVSPSFEYYQNRSLRGFTSAAN 464

Query: 568 P-SLATKGSTSKLTHRHSPLSSR 503
           P  +AT+ ST +    +  L+SR
Sbjct: 465 PHRVATRNSTVRQVPLYQFLTSR 487


>AL034392-5|CAE17989.1|  134|Caenorhabditis elegans Hypothetical
           protein Y40B1A.5 protein.
          Length = 134

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -1

Query: 684 PVDRMVNSRRRPKHVITDPPDP 619
           PV     +RRR +HV++ PP P
Sbjct: 4   PVVEFTTARRRKRHVVSTPPPP 25


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,820,228
Number of Sequences: 27780
Number of extensions: 322516
Number of successful extensions: 1033
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1033
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)