BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30101
(807 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U90223-1|AAB94642.1| 252|Homo sapiens deoxyuridine triphosphate... 139 9e-33
U62891-1|AAC51123.1| 164|Homo sapiens deoxyuridine triphosphata... 139 9e-33
U31930-1|AAC50418.1| 164|Homo sapiens deoxyuridine nucleotidohy... 139 9e-33
M89913-1|AAA58444.1| 141|Homo sapiens dUTP pyrophosphatase prot... 139 9e-33
L11877-1|AAA36801.1| 141|Homo sapiens dUTP nucleotidohydrolase ... 139 9e-33
CR541781-1|CAG46580.1| 164|Homo sapiens DUT protein. 139 9e-33
CR541720-1|CAG46521.1| 164|Homo sapiens DUT protein. 139 9e-33
BC110377-1|AAI10378.1| 252|Homo sapiens dUTP pyrophosphatase pr... 139 9e-33
BC070339-1|AAH70339.1| 252|Homo sapiens dUTP pyrophosphatase pr... 139 9e-33
BC033645-1|AAH33645.1| 164|Homo sapiens dUTP pyrophosphatase pr... 139 9e-33
AY935242-1|AAX14045.1| 164|Homo sapiens dUTP pyrophosphatase pr... 139 9e-33
AF018432-2|AAB71394.1| 164|Homo sapiens dUTPase protein. 139 9e-33
AF018432-1|AAB71393.1| 252|Homo sapiens dUTPase protein. 139 9e-33
AB049113-1|BAB13724.1| 164|Homo sapiens dUTP pyrophosphatase pr... 139 9e-33
AF090907-1|AAF24030.1| 73|Homo sapiens PRO0245 protein. 49 2e-05
DQ058014-1|AAY87452.1| 273|Homo sapiens protease protein. 42 0.003
AF164615-1|AAD51799.1| 1117|Homo sapiens Gag-Pro-Pol protein pro... 40 0.014
AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein... 39 0.018
AF164609-1|AAD51791.1| 1177|Homo sapiens Gag-Pro-Pol protein pro... 37 0.099
AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein pro... 36 0.17
AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein pro... 36 0.17
AF074086-6|AAD21096.1| 333|Homo sapiens protease protein. 36 0.17
AF074086-2|AAF88166.1| 333|Homo sapiens protease protein. 36 0.17
U90224-2|AAB93867.1| 51|Homo sapiens deoxyuridine triphosphate... 36 0.23
U90224-1|AAB93866.1| 139|Homo sapiens deoxyuridine triphosphate... 36 0.23
AK074181-1|BAB85007.1| 225|Homo sapiens FLJ00254 protein protein. 34 0.69
BC113981-1|AAI13982.1| 955|Homo sapiens family with sequence si... 31 6.5
BC111041-1|AAI11042.1| 738|Homo sapiens FAM29A protein protein. 31 6.5
BC065935-1|AAH65935.1| 885|Homo sapiens FAM29A protein protein. 31 6.5
AL591206-3|CAI12264.1| 955|Homo sapiens family with sequence si... 31 6.5
AL591206-2|CAI12263.1| 802|Homo sapiens family with sequence si... 31 6.5
AL356000-2|CAH72133.1| 955|Homo sapiens family with sequence si... 31 6.5
AL356000-1|CAH72132.1| 802|Homo sapiens family with sequence si... 31 6.5
AK023068-1|BAB14388.1| 668|Homo sapiens protein ( Homo sapiens ... 31 6.5
AK022964-1|BAB14334.1| 802|Homo sapiens protein ( Homo sapiens ... 31 6.5
AK000067-1|BAA90922.1| 354|Homo sapiens protein ( Homo sapiens ... 31 6.5
AF537091-1|AAN05700.1| 955|Homo sapiens hypothetical protein pr... 31 6.5
AF533709-1|AAQ09022.1| 955|Homo sapiens unknown protein protein. 31 6.5
AB046794-1|BAB13400.1| 670|Homo sapiens KIAA1574 protein protein. 31 6.5
>U90223-1|AAB94642.1| 252|Homo sapiens deoxyuridine triphosphate
nucleotidohydrolase precursor protein.
Length = 252
Score = 139 bits (337), Expect = 9e-33
Identities = 65/84 (77%), Positives = 71/84 (84%)
Frame = +1
Query: 511 YGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIY 690
YGRVAPRSGLA K+FIDVGAGVIDEDYRGNVGVVLFN F VKKGDRIAQLICE+I+
Sbjct: 167 YGRVAPRSGLAAKHFIDVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIF 226
Query: 691 YPVLQEVANLSVTQRGDGGFGSTG 762
YP ++EV L T+RG GGFGSTG
Sbjct: 227 YPEIEEVQALDDTERGSGGFGSTG 250
Score = 71.3 bits (167), Expect = 4e-12
Identities = 33/52 (63%), Positives = 39/52 (75%)
Frame = +2
Query: 353 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPG 508
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP G
Sbjct: 114 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSG 165
>U62891-1|AAC51123.1| 164|Homo sapiens deoxyuridine triphosphatase
protein.
Length = 164
Score = 139 bits (337), Expect = 9e-33
Identities = 65/84 (77%), Positives = 71/84 (84%)
Frame = +1
Query: 511 YGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIY 690
YGRVAPRSGLA K+FIDVGAGVIDEDYRGNVGVVLFN F VKKGDRIAQLICE+I+
Sbjct: 79 YGRVAPRSGLAAKHFIDVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIF 138
Query: 691 YPVLQEVANLSVTQRGDGGFGSTG 762
YP ++EV L T+RG GGFGSTG
Sbjct: 139 YPEIEEVQALDDTERGSGGFGSTG 162
Score = 71.3 bits (167), Expect = 4e-12
Identities = 33/52 (63%), Positives = 39/52 (75%)
Frame = +2
Query: 353 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPG 508
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP G
Sbjct: 26 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSG 77
>U31930-1|AAC50418.1| 164|Homo sapiens deoxyuridine
nucleotidohydrolase protein.
Length = 164
Score = 139 bits (337), Expect = 9e-33
Identities = 65/84 (77%), Positives = 71/84 (84%)
Frame = +1
Query: 511 YGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIY 690
YGRVAPRSGLA K+FIDVGAGVIDEDYRGNVGVVLFN F VKKGDRIAQLICE+I+
Sbjct: 79 YGRVAPRSGLAAKHFIDVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIF 138
Query: 691 YPVLQEVANLSVTQRGDGGFGSTG 762
YP ++EV L T+RG GGFGSTG
Sbjct: 139 YPEIEEVQALDDTERGSGGFGSTG 162
Score = 71.3 bits (167), Expect = 4e-12
Identities = 33/52 (63%), Positives = 39/52 (75%)
Frame = +2
Query: 353 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPG 508
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP G
Sbjct: 26 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSG 77
>M89913-1|AAA58444.1| 141|Homo sapiens dUTP pyrophosphatase
protein.
Length = 141
Score = 139 bits (337), Expect = 9e-33
Identities = 65/84 (77%), Positives = 71/84 (84%)
Frame = +1
Query: 511 YGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIY 690
YGRVAPRSGLA K+FIDVGAGVIDEDYRGNVGVVLFN F VKKGDRIAQLICE+I+
Sbjct: 56 YGRVAPRSGLAAKHFIDVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIF 115
Query: 691 YPVLQEVANLSVTQRGDGGFGSTG 762
YP ++EV L T+RG GGFGSTG
Sbjct: 116 YPEIEEVQALDDTERGSGGFGSTG 139
Score = 71.3 bits (167), Expect = 4e-12
Identities = 33/52 (63%), Positives = 39/52 (75%)
Frame = +2
Query: 353 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPG 508
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP G
Sbjct: 3 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSG 54
>L11877-1|AAA36801.1| 141|Homo sapiens dUTP nucleotidohydrolase
protein.
Length = 141
Score = 139 bits (337), Expect = 9e-33
Identities = 65/84 (77%), Positives = 71/84 (84%)
Frame = +1
Query: 511 YGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIY 690
YGRVAPRSGLA K+FIDVGAGVIDEDYRGNVGVVLFN F VKKGDRIAQLICE+I+
Sbjct: 56 YGRVAPRSGLAAKHFIDVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIF 115
Query: 691 YPVLQEVANLSVTQRGDGGFGSTG 762
YP ++EV L T+RG GGFGSTG
Sbjct: 116 YPEIEEVQALDDTERGSGGFGSTG 139
Score = 71.3 bits (167), Expect = 4e-12
Identities = 33/52 (63%), Positives = 39/52 (75%)
Frame = +2
Query: 353 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPG 508
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP G
Sbjct: 3 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSG 54
>CR541781-1|CAG46580.1| 164|Homo sapiens DUT protein.
Length = 164
Score = 139 bits (337), Expect = 9e-33
Identities = 65/84 (77%), Positives = 71/84 (84%)
Frame = +1
Query: 511 YGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIY 690
YGRVAPRSGLA K+FIDVGAGVIDEDYRGNVGVVLFN F VKKGDRIAQLICE+I+
Sbjct: 79 YGRVAPRSGLAAKHFIDVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIF 138
Query: 691 YPVLQEVANLSVTQRGDGGFGSTG 762
YP ++EV L T+RG GGFGSTG
Sbjct: 139 YPEIEEVQALDDTERGSGGFGSTG 162
Score = 71.3 bits (167), Expect = 4e-12
Identities = 33/52 (63%), Positives = 39/52 (75%)
Frame = +2
Query: 353 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPG 508
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP G
Sbjct: 26 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSG 77
>CR541720-1|CAG46521.1| 164|Homo sapiens DUT protein.
Length = 164
Score = 139 bits (337), Expect = 9e-33
Identities = 65/84 (77%), Positives = 71/84 (84%)
Frame = +1
Query: 511 YGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIY 690
YGRVAPRSGLA K+FIDVGAGVIDEDYRGNVGVVLFN F VKKGDRIAQLICE+I+
Sbjct: 79 YGRVAPRSGLAAKHFIDVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIF 138
Query: 691 YPVLQEVANLSVTQRGDGGFGSTG 762
YP ++EV L T+RG GGFGSTG
Sbjct: 139 YPEIEEVQALDDTERGSGGFGSTG 162
Score = 71.3 bits (167), Expect = 4e-12
Identities = 33/52 (63%), Positives = 39/52 (75%)
Frame = +2
Query: 353 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPG 508
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP G
Sbjct: 26 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSG 77
>BC110377-1|AAI10378.1| 252|Homo sapiens dUTP pyrophosphatase
protein.
Length = 252
Score = 139 bits (337), Expect = 9e-33
Identities = 65/84 (77%), Positives = 71/84 (84%)
Frame = +1
Query: 511 YGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIY 690
YGRVAPRSGLA K+FIDVGAGVIDEDYRGNVGVVLFN F VKKGDRIAQLICE+I+
Sbjct: 167 YGRVAPRSGLAAKHFIDVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIF 226
Query: 691 YPVLQEVANLSVTQRGDGGFGSTG 762
YP ++EV L T+RG GGFGSTG
Sbjct: 227 YPEIEEVQALDDTERGSGGFGSTG 250
Score = 71.3 bits (167), Expect = 4e-12
Identities = 33/52 (63%), Positives = 39/52 (75%)
Frame = +2
Query: 353 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPG 508
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP G
Sbjct: 114 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSG 165
>BC070339-1|AAH70339.1| 252|Homo sapiens dUTP pyrophosphatase
protein.
Length = 252
Score = 139 bits (337), Expect = 9e-33
Identities = 65/84 (77%), Positives = 71/84 (84%)
Frame = +1
Query: 511 YGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIY 690
YGRVAPRSGLA K+FIDVGAGVIDEDYRGNVGVVLFN F VKKGDRIAQLICE+I+
Sbjct: 167 YGRVAPRSGLAAKHFIDVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIF 226
Query: 691 YPVLQEVANLSVTQRGDGGFGSTG 762
YP ++EV L T+RG GGFGSTG
Sbjct: 227 YPEIEEVQALDDTERGSGGFGSTG 250
Score = 71.3 bits (167), Expect = 4e-12
Identities = 33/52 (63%), Positives = 39/52 (75%)
Frame = +2
Query: 353 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPG 508
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP G
Sbjct: 114 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSG 165
>BC033645-1|AAH33645.1| 164|Homo sapiens dUTP pyrophosphatase
protein.
Length = 164
Score = 139 bits (337), Expect = 9e-33
Identities = 65/84 (77%), Positives = 71/84 (84%)
Frame = +1
Query: 511 YGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIY 690
YGRVAPRSGLA K+FIDVGAGVIDEDYRGNVGVVLFN F VKKGDRIAQLICE+I+
Sbjct: 79 YGRVAPRSGLAAKHFIDVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIF 138
Query: 691 YPVLQEVANLSVTQRGDGGFGSTG 762
YP ++EV L T+RG GGFGSTG
Sbjct: 139 YPEIEEVQALDDTERGSGGFGSTG 162
Score = 71.3 bits (167), Expect = 4e-12
Identities = 33/52 (63%), Positives = 39/52 (75%)
Frame = +2
Query: 353 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPG 508
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP G
Sbjct: 26 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSG 77
>AY935242-1|AAX14045.1| 164|Homo sapiens dUTP pyrophosphatase
protein.
Length = 164
Score = 139 bits (337), Expect = 9e-33
Identities = 65/84 (77%), Positives = 71/84 (84%)
Frame = +1
Query: 511 YGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIY 690
YGRVAPRSGLA K+FIDVGAGVIDEDYRGNVGVVLFN F VKKGDRIAQLICE+I+
Sbjct: 79 YGRVAPRSGLAAKHFIDVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIF 138
Query: 691 YPVLQEVANLSVTQRGDGGFGSTG 762
YP ++EV L T+RG GGFGSTG
Sbjct: 139 YPEIEEVQALDDTERGSGGFGSTG 162
Score = 71.3 bits (167), Expect = 4e-12
Identities = 33/52 (63%), Positives = 39/52 (75%)
Frame = +2
Query: 353 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPG 508
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP G
Sbjct: 26 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSG 77
>AF018432-2|AAB71394.1| 164|Homo sapiens dUTPase protein.
Length = 164
Score = 139 bits (337), Expect = 9e-33
Identities = 65/84 (77%), Positives = 71/84 (84%)
Frame = +1
Query: 511 YGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIY 690
YGRVAPRSGLA K+FIDVGAGVIDEDYRGNVGVVLFN F VKKGDRIAQLICE+I+
Sbjct: 79 YGRVAPRSGLAAKHFIDVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIF 138
Query: 691 YPVLQEVANLSVTQRGDGGFGSTG 762
YP ++EV L T+RG GGFGSTG
Sbjct: 139 YPEIEEVQALDDTERGSGGFGSTG 162
Score = 71.3 bits (167), Expect = 4e-12
Identities = 33/52 (63%), Positives = 39/52 (75%)
Frame = +2
Query: 353 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPG 508
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP G
Sbjct: 26 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSG 77
>AF018432-1|AAB71393.1| 252|Homo sapiens dUTPase protein.
Length = 252
Score = 139 bits (337), Expect = 9e-33
Identities = 65/84 (77%), Positives = 71/84 (84%)
Frame = +1
Query: 511 YGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIY 690
YGRVAPRSGLA K+FIDVGAGVIDEDYRGNVGVVLFN F VKKGDRIAQLICE+I+
Sbjct: 167 YGRVAPRSGLAAKHFIDVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIF 226
Query: 691 YPVLQEVANLSVTQRGDGGFGSTG 762
YP ++EV L T+RG GGFGSTG
Sbjct: 227 YPEIEEVQALDDTERGSGGFGSTG 250
Score = 71.3 bits (167), Expect = 4e-12
Identities = 33/52 (63%), Positives = 39/52 (75%)
Frame = +2
Query: 353 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPG 508
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP G
Sbjct: 114 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSG 165
>AB049113-1|BAB13724.1| 164|Homo sapiens dUTP pyrophosphatase
protein.
Length = 164
Score = 139 bits (337), Expect = 9e-33
Identities = 65/84 (77%), Positives = 71/84 (84%)
Frame = +1
Query: 511 YGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIY 690
YGRVAPRSGLA K+FIDVGAGVIDEDYRGNVGVVLFN F VKKGDRIAQLICE+I+
Sbjct: 79 YGRVAPRSGLAAKHFIDVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIF 138
Query: 691 YPVLQEVANLSVTQRGDGGFGSTG 762
YP ++EV L T+RG GGFGSTG
Sbjct: 139 YPEIEEVQALDDTERGSGGFGSTG 162
Score = 71.3 bits (167), Expect = 4e-12
Identities = 33/52 (63%), Positives = 39/52 (75%)
Frame = +2
Query: 353 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPG 508
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP G
Sbjct: 26 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSG 77
>AF090907-1|AAF24030.1| 73|Homo sapiens PRO0245 protein.
Length = 73
Score = 48.8 bits (111), Expect = 2e-05
Identities = 25/52 (48%), Positives = 30/52 (57%)
Frame = +2
Query: 353 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPG 508
L+F SE A +GS +A G DL AYD T+P K L K D+QI LP G
Sbjct: 3 LRFAPFSEQATTLTQGSTQATGYDLNGAYDDTIPPMEKALGKMDIQIALPSG 54
>DQ058014-1|AAY87452.1| 273|Homo sapiens protease protein.
Length = 273
Score = 41.9 bits (94), Expect = 0.003
Identities = 28/82 (34%), Positives = 43/82 (52%)
Frame = +1
Query: 514 GRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYY 693
G + RS L LK + + GV+D DY+G + +V+ S +S GDRIA+L+
Sbjct: 39 GLILGRSSLNLKG-VQIHTGVVDSDYKGEIQLVI--SSSIPWSASPGDRIAELL------ 89
Query: 694 PVLQEVANLSVTQRGDGGFGST 759
+L + + + GGFGST
Sbjct: 90 -LLPYIKGGNSEIKRTGGFGST 110
>AF164615-1|AAD51799.1| 1117|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1117
Score = 39.5 bits (88), Expect = 0.014
Identities = 21/54 (38%), Positives = 31/54 (57%)
Frame = +1
Query: 514 GRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLI 675
G + RS L LK + + V+D DY+G + +V+ S +S GDRIAQL+
Sbjct: 700 GLILGRSSLNLKG-VQIHTSVVDSDYKGEIQLVI--SSSVPWSASPGDRIAQLL 750
>AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein
protein.
Length = 2294
Score = 39.1 bits (87), Expect = 0.018
Identities = 21/54 (38%), Positives = 31/54 (57%)
Frame = +1
Query: 514 GRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLI 675
G + RS L LK + + V+D DY+G + +V+ S +S GDRIAQL+
Sbjct: 700 GLILGRSSLNLKG-VQIHTSVVDSDYKGEIQLVI--SSSIPWSASPGDRIAQLL 750
>AF164609-1|AAD51791.1| 1177|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1177
Score = 36.7 bits (81), Expect = 0.099
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +1
Query: 514 GRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLI 675
G + RS L LK + + V+D DY+G + +V+ S +S GDR AQL+
Sbjct: 700 GLILGRSSLNLKG-VQIHTSVVDSDYKGEIQLVI--SSSIPWSASPGDRSAQLL 750
>AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1879
Score = 35.9 bits (79), Expect = 0.17
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +1
Query: 514 GRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLI 675
G + RS L LK + + V+D DY+G + +V+ S +S DRIAQL+
Sbjct: 700 GLILGRSSLNLKG-VQIHTSVVDSDYKGEIQLVI--SSSIPWSASPRDRIAQLL 750
>AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1755
Score = 35.9 bits (79), Expect = 0.17
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +1
Query: 514 GRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLI 675
G + RS L LK + + V+D DY+G + +V+ S +S DRIAQL+
Sbjct: 700 GLILGRSSLNLKG-VQIHTSVVDSDYKGEIQLVI--SSSIPWSASPRDRIAQLL 750
>AF074086-6|AAD21096.1| 333|Homo sapiens protease protein.
Length = 333
Score = 35.9 bits (79), Expect = 0.17
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +1
Query: 514 GRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLI 675
G + RS L LK + + V+D DY+G + +V+ S +S DRIAQL+
Sbjct: 98 GLILGRSSLNLKG-VQIHTSVVDSDYKGEIQLVI--SSSIPWSASPRDRIAQLL 148
>AF074086-2|AAF88166.1| 333|Homo sapiens protease protein.
Length = 333
Score = 35.9 bits (79), Expect = 0.17
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +1
Query: 514 GRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLI 675
G + RS L LK + + V+D DY+G + +V+ S +S DRIAQL+
Sbjct: 98 GLILGRSSLNLKG-VQIHTSVVDSDYKGEIQLVI--SSSIPWSASPRDRIAQLL 148
>U90224-2|AAB93867.1| 51|Homo sapiens deoxyuridine triphosphate
nucleotidohydrolase, nuclear isoform protein.
Length = 51
Score = 35.5 bits (78), Expect = 0.23
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +2
Query: 353 LKFTRLSENAFQPVRGSEKAAGIDL 427
L+F RLSE+A P RGS +AAG DL
Sbjct: 26 LRFARLSEHATAPTRGSARAAGYDL 50
>U90224-1|AAB93866.1| 139|Homo sapiens deoxyuridine triphosphate
nucleotidohydrolase, mitochondrial isoform protein.
Length = 139
Score = 35.5 bits (78), Expect = 0.23
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +2
Query: 353 LKFTRLSENAFQPVRGSEKAAGIDL 427
L+F RLSE+A P RGS +AAG DL
Sbjct: 114 LRFARLSEHATAPTRGSARAAGYDL 138
>AK074181-1|BAB85007.1| 225|Homo sapiens FLJ00254 protein protein.
Length = 225
Score = 33.9 bits (74), Expect = 0.69
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = +1
Query: 511 YGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQ 669
+G + P S A K + V AGVID DY+ + ++L N S +++ GD + +
Sbjct: 116 FGLLLPLSQQAKKG-VAVLAGVIDLDYQDEISLLLHNRSKKEYAWNTGDPLGR 167
>BC113981-1|AAI13982.1| 955|Homo sapiens family with sequence
similarity 29, member A protein.
Length = 955
Score = 30.7 bits (66), Expect = 6.5
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 469 ISEN*P-TNRTTAWGYGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDT 633
+S N P TN+T W +++ SG++ K+F D G++ E VG + FN S +
Sbjct: 741 VSCNKPSTNKTMLWNSFQIS--SGISSKSFKDNDFGILHETLPEEVGHLSFNSSSS 794
>BC111041-1|AAI11042.1| 738|Homo sapiens FAM29A protein protein.
Length = 738
Score = 30.7 bits (66), Expect = 6.5
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 469 ISEN*P-TNRTTAWGYGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDT 633
+S N P TN+T W +++ SG++ K+F D G++ E VG + FN S +
Sbjct: 524 VSCNKPSTNKTMLWNSFQIS--SGISSKSFKDNDFGILHETLPEEVGHLSFNSSSS 577
>BC065935-1|AAH65935.1| 885|Homo sapiens FAM29A protein protein.
Length = 885
Score = 30.7 bits (66), Expect = 6.5
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 469 ISEN*P-TNRTTAWGYGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDT 633
+S N P TN+T W +++ SG++ K+F D G++ E VG + FN S +
Sbjct: 671 VSCNKPSTNKTMLWNSFQIS--SGISSKSFKDNDFGILHETLPEEVGHLSFNSSSS 724
>AL591206-3|CAI12264.1| 955|Homo sapiens family with sequence
similarity 29, member A protein.
Length = 955
Score = 30.7 bits (66), Expect = 6.5
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 469 ISEN*P-TNRTTAWGYGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDT 633
+S N P TN+T W +++ SG++ K+F D G++ E VG + FN S +
Sbjct: 741 VSCNKPSTNKTMLWNSFQIS--SGISSKSFKDNDFGILHETLPEEVGHLSFNSSSS 794
>AL591206-2|CAI12263.1| 802|Homo sapiens family with sequence
similarity 29, member A protein.
Length = 802
Score = 30.7 bits (66), Expect = 6.5
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 469 ISEN*P-TNRTTAWGYGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDT 633
+S N P TN+T W +++ SG++ K+F D G++ E VG + FN S +
Sbjct: 605 VSCNKPSTNKTMLWNSFQIS--SGISSKSFKDNDFGILHETLPEEVGHLSFNSSSS 658
>AL356000-2|CAH72133.1| 955|Homo sapiens family with sequence
similarity 29, member A protein.
Length = 955
Score = 30.7 bits (66), Expect = 6.5
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 469 ISEN*P-TNRTTAWGYGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDT 633
+S N P TN+T W +++ SG++ K+F D G++ E VG + FN S +
Sbjct: 741 VSCNKPSTNKTMLWNSFQIS--SGISSKSFKDNDFGILHETLPEEVGHLSFNSSSS 794
>AL356000-1|CAH72132.1| 802|Homo sapiens family with sequence
similarity 29, member A protein.
Length = 802
Score = 30.7 bits (66), Expect = 6.5
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 469 ISEN*P-TNRTTAWGYGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDT 633
+S N P TN+T W +++ SG++ K+F D G++ E VG + FN S +
Sbjct: 605 VSCNKPSTNKTMLWNSFQIS--SGISSKSFKDNDFGILHETLPEEVGHLSFNSSSS 658
>AK023068-1|BAB14388.1| 668|Homo sapiens protein ( Homo sapiens
cDNA FLJ13006 fis, clone NT2RP3000449. ).
Length = 668
Score = 30.7 bits (66), Expect = 6.5
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 469 ISEN*P-TNRTTAWGYGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDT 633
+S N P TN+T W +++ SG++ K+F D G++ E VG + FN S +
Sbjct: 454 VSCNKPSTNKTMLWNSFQIS--SGISSKSFKDNDFGILHETLPEEVGHLSFNSSSS 507
>AK022964-1|BAB14334.1| 802|Homo sapiens protein ( Homo sapiens
cDNA FLJ12902 fis, clone NT2RP2004347. ).
Length = 802
Score = 30.7 bits (66), Expect = 6.5
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 469 ISEN*P-TNRTTAWGYGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDT 633
+S N P TN+T W +++ SG++ K+F D G++ E VG + FN S +
Sbjct: 605 VSCNKPSTNKTMLWNSFQIS--SGISSKSFKDNDFGILHETLPEEVGHLSFNSSSS 658
>AK000067-1|BAA90922.1| 354|Homo sapiens protein ( Homo sapiens
cDNA FLJ20060 fis, clone COL01358. ).
Length = 354
Score = 30.7 bits (66), Expect = 6.5
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 469 ISEN*P-TNRTTAWGYGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDT 633
+S N P TN+T W +++ SG++ K+F D G++ E VG + FN S +
Sbjct: 140 VSCNKPSTNKTMLWNSFQIS--SGISSKSFKDNDFGILHETLPEEVGHLSFNSSSS 193
>AF537091-1|AAN05700.1| 955|Homo sapiens hypothetical protein
protein.
Length = 955
Score = 30.7 bits (66), Expect = 6.5
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 469 ISEN*P-TNRTTAWGYGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDT 633
+S N P TN+T W +++ SG++ K+F D G++ E VG + FN S +
Sbjct: 741 VSCNKPSTNKTMLWNSFQIS--SGISSKSFKDNDFGILHETLPEEVGHLSFNSSSS 794
>AF533709-1|AAQ09022.1| 955|Homo sapiens unknown protein protein.
Length = 955
Score = 30.7 bits (66), Expect = 6.5
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 469 ISEN*P-TNRTTAWGYGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDT 633
+S N P TN+T W +++ SG++ K+F D G++ E VG + FN S +
Sbjct: 741 VSCNKPSTNKTMLWNSFQIS--SGISSKSFKDNDFGILHETLPEEVGHLSFNSSSS 794
>AB046794-1|BAB13400.1| 670|Homo sapiens KIAA1574 protein protein.
Length = 670
Score = 30.7 bits (66), Expect = 6.5
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 469 ISEN*P-TNRTTAWGYGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHSDT 633
+S N P TN+T W +++ SG++ K+F D G++ E VG + FN S +
Sbjct: 456 VSCNKPSTNKTMLWNSFQIS--SGISSKSFKDNDFGILHETLPEEVGHLSFNSSSS 509
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,711,344
Number of Sequences: 237096
Number of extensions: 1586530
Number of successful extensions: 2183
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 2122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2181
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9980595722
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -