Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30099
(577 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC009189-1|AAH09189.1| 144|Homo sapiens NDUFA13 protein protein. 56 7e-08
BC000589-1|AAH00589.2| 146|Homo sapiens NDUFA13 protein protein. 56 7e-08
AF286697-1|AAG28167.1| 144|Homo sapiens novel cell death-regula... 56 7e-08
AF261134-1|AAG44670.1| 227|Homo sapiens CDA016 protein. 56 7e-08
AF155662-1|AAF67481.1| 144|Homo sapiens putative 16.7 kDa prote... 56 7e-08
AF132973-1|AAD27748.1| 135|Homo sapiens CGI-39 protein protein. 50 6e-06
AK131301-1|BAD18469.1| 544|Homo sapiens protein ( Homo sapiens ... 35 0.24
AK123789-1|BAC85691.1| 182|Homo sapiens protein ( Homo sapiens ... 32 1.7
AB033066-1|BAA86554.1| 733|Homo sapiens KIAA1240 protein protein. 31 3.8
U36501-1|AAC50743.1| 688|Homo sapiens SP100-B protein. 29 8.9
M60618-1|AAA35537.1| 480|Homo sapiens nuclear autoantigen protein. 29 8.9
BC011562-1|AAH11562.1| 480|Homo sapiens SP100 protein protein. 29 8.9
AF255565-1|AAK51202.1| 885|Homo sapiens nuclear body protein SP... 29 8.9
AF056322-1|AAC39790.1| 879|Homo sapiens SP100-HMG nuclear autoa... 29 8.9
AC010149-1|AAY14879.1| 843|Homo sapiens unknown protein. 29 8.9
>BC009189-1|AAH09189.1| 144|Homo sapiens NDUFA13 protein protein.
Length = 144
Score = 56.4 bits (130), Expect = 7e-08
Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Frame = +2
Query: 29 KQDLPPPGGYKPIPFKRIPAKSYFSGYTMFAGFIGMTI---GSIYLYNITYKRILKDEIE 199
KQD+PPPGGY PI +KR + SGY+M A IG I SI +N +R+ +IE
Sbjct: 7 KQDMPPPGGYGPIDYKRNLPRRGLSGYSMLAIGIGTLIYGHWSIMKWNRERRRL---QIE 63
Query: 200 MRSAKMAIYPALLAERDR 253
A++A+ P L AE DR
Sbjct: 64 DFEARIALLPLLQAETDR 81
Score = 33.1 bits (72), Expect = 0.72
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +1
Query: 259 LKQLRRNRDAEAELMRDVPGWEVG 330
L+ LR N + EA +M+DVP W+VG
Sbjct: 84 LQMLRENLEEEAIIMKDVPDWKVG 107
>BC000589-1|AAH00589.2| 146|Homo sapiens NDUFA13 protein protein.
Length = 146
Score = 56.4 bits (130), Expect = 7e-08
Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Frame = +2
Query: 29 KQDLPPPGGYKPIPFKRIPAKSYFSGYTMFAGFIGMTI---GSIYLYNITYKRILKDEIE 199
KQD+PPPGGY PI +KR + SGY+M A IG I SI +N +R+ +IE
Sbjct: 9 KQDMPPPGGYGPIDYKRNLPRRGLSGYSMLAIGIGTLIYGHWSIMKWNRERRRL---QIE 65
Query: 200 MRSAKMAIYPALLAERDR 253
A++A+ P L AE DR
Sbjct: 66 DFEARIALLPLLQAETDR 83
Score = 33.1 bits (72), Expect = 0.72
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +1
Query: 259 LKQLRRNRDAEAELMRDVPGWEVG 330
L+ LR N + EA +M+DVP W+VG
Sbjct: 86 LQMLRENLEEEAIIMKDVPDWKVG 109
>AF286697-1|AAG28167.1| 144|Homo sapiens novel cell
death-regulatory protein GRIM19 protein.
Length = 144
Score = 56.4 bits (130), Expect = 7e-08
Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Frame = +2
Query: 29 KQDLPPPGGYKPIPFKRIPAKSYFSGYTMFAGFIGMTI---GSIYLYNITYKRILKDEIE 199
KQD+PPPGGY PI +KR + SGY+M A IG I SI +N +R+ +IE
Sbjct: 7 KQDMPPPGGYGPIDYKRNLPRRGLSGYSMLAIGIGTLIYGHWSIMKWNRERRRL---QIE 63
Query: 200 MRSAKMAIYPALLAERDR 253
A++A+ P L AE DR
Sbjct: 64 DFEARIALLPLLQAETDR 81
Score = 33.1 bits (72), Expect = 0.72
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +1
Query: 259 LKQLRRNRDAEAELMRDVPGWEVG 330
L+ LR N + EA +M+DVP W+VG
Sbjct: 84 LQMLRENLEEEAIIMKDVPDWKVG 107
>AF261134-1|AAG44670.1| 227|Homo sapiens CDA016 protein.
Length = 227
Score = 56.4 bits (130), Expect = 7e-08
Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Frame = +2
Query: 29 KQDLPPPGGYKPIPFKRIPAKSYFSGYTMFAGFIGMTI---GSIYLYNITYKRILKDEIE 199
KQD+PPPGGY PI +KR + SGY+M A IG I SI +N +R+ +IE
Sbjct: 90 KQDMPPPGGYGPIDYKRNLPRRGLSGYSMLAIGIGTLIYGHWSIMKWNRERRRL---QIE 146
Query: 200 MRSAKMAIYPALLAERDR 253
A++A+ P L AE DR
Sbjct: 147 DFEARIALLPLLQAETDR 164
Score = 33.1 bits (72), Expect = 0.72
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +1
Query: 259 LKQLRRNRDAEAELMRDVPGWEVG 330
L+ LR N + EA +M+DVP W+VG
Sbjct: 167 LQMLRENLEEEAIIMKDVPDWKVG 190
>AF155662-1|AAF67481.1| 144|Homo sapiens putative 16.7 kDa protein
protein.
Length = 144
Score = 56.4 bits (130), Expect = 7e-08
Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Frame = +2
Query: 29 KQDLPPPGGYKPIPFKRIPAKSYFSGYTMFAGFIGMTI---GSIYLYNITYKRILKDEIE 199
KQD+PPPGGY PI +KR + SGY+M A IG I SI +N +R+ +IE
Sbjct: 7 KQDMPPPGGYGPIDYKRNLPRRGLSGYSMLAIGIGTLIYGHWSIMKWNRERRRL---QIE 63
Query: 200 MRSAKMAIYPALLAERDR 253
A++A+ P L AE DR
Sbjct: 64 DFEARIALLPLLQAETDR 81
Score = 33.1 bits (72), Expect = 0.72
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +1
Query: 259 LKQLRRNRDAEAELMRDVPGWEVG 330
L+ LR N + EA +M+DVP W+VG
Sbjct: 84 LQMLRENLEEEAIIMKDVPDWKVG 107
>AF132973-1|AAD27748.1| 135|Homo sapiens CGI-39 protein protein.
Length = 135
Score = 50.0 bits (114), Expect = 6e-06
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Frame = +2
Query: 38 LPPPGGYKPIPFKRIPAKSYFSGYTMFAGFIGMTI---GSIYLYNITYKRILKDEIEMRS 208
+PPPGGY PI +KR + SGY+M A IG I SI +N +R+ +IE
Sbjct: 1 MPPPGGYGPIDYKRNLPRRGLSGYSMLAIGIGTLIYGHWSIMKWNRERRRL---QIEDFE 57
Query: 209 AKMAIYPALLAERDR 253
A++A+ P L AE DR
Sbjct: 58 ARIALLPLLQAETDR 72
Score = 33.1 bits (72), Expect = 0.72
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +1
Query: 259 LKQLRRNRDAEAELMRDVPGWEVG 330
L+ LR N + EA +M+DVP W+VG
Sbjct: 75 LQMLRENLEEEAIIMKDVPDWKVG 98
>AK131301-1|BAD18469.1| 544|Homo sapiens protein ( Homo sapiens
cDNA FLJ16266 fis, clone IMR322013731, weakly similar
to TAT-BINDING HOMOLOG 7. ).
Length = 544
Score = 34.7 bits (76), Expect = 0.24
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = -1
Query: 193 LILKNSLVSYVIEIYRTNCHSNEPSKHSISAEI 95
LIL++S + I+ TNCHS P K S SA I
Sbjct: 183 LILEDSEDENALSIFETNCHSGSPKKQSSSAAI 215
>AK123789-1|BAC85691.1| 182|Homo sapiens protein ( Homo sapiens
cDNA FLJ41795 fis, clone NESOP2002738. ).
Length = 182
Score = 31.9 bits (69), Expect = 1.7
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = -1
Query: 412 CVHSTLGRLVRPTGRGE*VCRRVLRSKYRPPIRERLASALPQHP 281
C+ +T GRL PT + R+ R+ RPP + S +P HP
Sbjct: 68 CIRTTPGRLWGPTLHPQGSMRQGPRNSLRPPPSKPALSPIPAHP 111
>AB033066-1|BAA86554.1| 733|Homo sapiens KIAA1240 protein protein.
Length = 733
Score = 30.7 bits (66), Expect = 3.8
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -1
Query: 160 IEIYRTNCHSNEPSKHSISAEI 95
+ I+ TNCHS P K S SA I
Sbjct: 6 LSIFETNCHSGSPKKQSSSAAI 27
>U36501-1|AAC50743.1| 688|Homo sapiens SP100-B protein.
Length = 688
Score = 29.5 bits (63), Expect = 8.9
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +2
Query: 155 LYNITYKRILKDEIEMRSAKMAIYPALLAERDRDI 259
LY+I +K ++++E+ +A +P L RDRD+
Sbjct: 49 LYDIVFKHFKRNKVEISNAIKKTFPFLEGLRDRDL 83
>M60618-1|AAA35537.1| 480|Homo sapiens nuclear autoantigen protein.
Length = 480
Score = 29.5 bits (63), Expect = 8.9
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +2
Query: 155 LYNITYKRILKDEIEMRSAKMAIYPALLAERDRDI 259
LY+I +K ++++E+ +A +P L RDRD+
Sbjct: 49 LYDIVFKHFKRNKVEISNAIKKTFPFLEGLRDRDL 83
>BC011562-1|AAH11562.1| 480|Homo sapiens SP100 protein protein.
Length = 480
Score = 29.5 bits (63), Expect = 8.9
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +2
Query: 155 LYNITYKRILKDEIEMRSAKMAIYPALLAERDRDI 259
LY+I +K ++++E+ +A +P L RDRD+
Sbjct: 49 LYDIVFKHFKRNKVEISNAIKKTFPFLEGLRDRDL 83
>AF255565-1|AAK51202.1| 885|Homo sapiens nuclear body protein
SP100C protein.
Length = 885
Score = 29.5 bits (63), Expect = 8.9
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +2
Query: 155 LYNITYKRILKDEIEMRSAKMAIYPALLAERDRDI 259
LY+I +K ++++E+ +A +P L RDRD+
Sbjct: 49 LYDIVFKHFKRNKVEISNAIKKTFPFLEGLRDRDL 83
>AF056322-1|AAC39790.1| 879|Homo sapiens SP100-HMG nuclear
autoantigen protein.
Length = 879
Score = 29.5 bits (63), Expect = 8.9
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +2
Query: 155 LYNITYKRILKDEIEMRSAKMAIYPALLAERDRDI 259
LY+I +K ++++E+ +A +P L RDRD+
Sbjct: 49 LYDIVFKHFKRNKVEISNAIKKTFPFLEGLRDRDL 83
>AC010149-1|AAY14879.1| 843|Homo sapiens unknown protein.
Length = 843
Score = 29.5 bits (63), Expect = 8.9
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +2
Query: 155 LYNITYKRILKDEIEMRSAKMAIYPALLAERDRDI 259
LY+I +K ++++E+ +A +P L RDRD+
Sbjct: 13 LYDIVFKHFKRNKVEISNAIKKTFPFLEGLRDRDL 47
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,456,998
Number of Sequences: 237096
Number of extensions: 1655114
Number of successful extensions: 3808
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3808
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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