Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30095
         (812 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    29   0.058
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    25   0.95 
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   2.9  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   2.9  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   3.8  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    23   3.8  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 28.7 bits (61), Expect = 0.058
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 7/39 (17%)
 Frame = -3

Query: 216 YYYRHYYEKLW-------VDHFCADIYNFPHNTLQ*CIL 121
           YY+R  YE  W       ++++C  +YN  H+TL   IL
Sbjct: 120 YYWRQQYEDFWHRYTLSFIENYCQFLYNCFHSTLLLMIL 158


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 24.6 bits (51), Expect = 0.95
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +2

Query: 551 CRNRQGGGTYPCGLTRGLTTTHCSIITM 634
           CR   GGG Y C    G   T+C I T+
Sbjct: 391 CRISDGGG-YICDCPSGTNGTNCEIDTI 417


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 607 HHSLLHNNYGKLRPL 651
           HH  LHN Y  ++P+
Sbjct: 14  HHDTLHNIYTSMKPV 28


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 607 HHSLLHNNYGKLRPL 651
           HH  LHN Y  ++P+
Sbjct: 14  HHDTLHNIYTSMKPV 28


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -2

Query: 136 TVVHINPLLATHFI 95
           TV HI+P L TH I
Sbjct: 44  TVDHIDPYLCTHII 57


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 722 YNDLYFHYFQHLALL*RTVFETP 790
           YN  Y+ Y Q+ AL  +  F  P
Sbjct: 38  YNPYYYQYLQNAALYHKLQFRGP 60


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,748
Number of Sequences: 336
Number of extensions: 4478
Number of successful extensions: 22
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22206566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)