Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30093
         (743 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   7.5  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   7.5  
AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative 5'-nucleo...    23   10.0 
AJ000034-1|CAA03870.1|   98|Anopheles gambiae 5'-nucleotidase pr...    23   10.0 

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 566  YVYSLVVYQFKNYF 607
            +V+ L  ++FKNYF
Sbjct: 1222 FVFKLAAFRFKNYF 1235


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 140 HLQCGQSSYLNEQEPEVQTEHQDQ 211
           HL  G+ S    Q+ ++Q  HQ Q
Sbjct: 611 HLMAGKESISQHQQSQLQHSHQAQ 634


>AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative
           5'-nucleotidase protein.
          Length = 570

 Score = 23.0 bits (47), Expect = 10.0
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = +1

Query: 637 NDGQAEASYVRIHAVVKQREEQIKSENP 720
           N  +  A   R++  +KQ + + K++NP
Sbjct: 60  NSKECIAGIARVYHTIKQLKSEYKTKNP 87


>AJ000034-1|CAA03870.1|   98|Anopheles gambiae 5'-nucleotidase
           protein.
          Length = 98

 Score = 23.0 bits (47), Expect = 10.0
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = +1

Query: 637 NDGQAEASYVRIHAVVKQREEQIKSENP 720
           N  +  A   R++  +KQ + + K++NP
Sbjct: 60  NSKECIAGIARVYHTIKQLKSEYKTKNP 87


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 774,177
Number of Sequences: 2352
Number of extensions: 16431
Number of successful extensions: 27
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76507752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)