Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30093
(743 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M21045-2|AAA28853.1| 151|Drosophila melanogaster protein ( D.me... 160 2e-39
M21045-1|AAA28852.1| 151|Drosophila melanogaster protein ( D.me... 160 2e-39
AY071321-1|AAL48943.1| 151|Drosophila melanogaster RE34379p pro... 160 2e-39
AE014298-1091|AAF46299.1| 151|Drosophila melanogaster CG1527-PA... 160 2e-39
AE014298-1090|AAF46297.1| 151|Drosophila melanogaster CG1524-PB... 160 2e-39
AE014298-1089|AAF46298.1| 151|Drosophila melanogaster CG1524-PA... 160 2e-39
AY070665-1|AAL48136.1| 123|Drosophila melanogaster RH04612p pro... 127 2e-29
X71138-1|CAA50468.1| 112|Drosophila melanogaster Hmg-D protein ... 45 1e-04
M77023-1|AAA28609.1| 112|Drosophila melanogaster high mobility ... 45 1e-04
AY118333-1|AAM48362.1| 112|Drosophila melanogaster LD24628p pro... 45 1e-04
AM294363-1|CAL26293.1| 112|Drosophila melanogaster CG17950 prot... 45 1e-04
AM294362-1|CAL26292.1| 112|Drosophila melanogaster CG17950 prot... 45 1e-04
AM294361-1|CAL26291.1| 112|Drosophila melanogaster CG17950 prot... 45 1e-04
AM294360-1|CAL26290.1| 112|Drosophila melanogaster CG17950 prot... 45 1e-04
AM294359-1|CAL26289.1| 112|Drosophila melanogaster CG17950 prot... 45 1e-04
AM294358-1|CAL26288.1| 112|Drosophila melanogaster CG17950 prot... 45 1e-04
AM294357-1|CAL26287.1| 112|Drosophila melanogaster CG17950 prot... 45 1e-04
AM294356-1|CAL26286.1| 112|Drosophila melanogaster CG17950 prot... 45 1e-04
AM294355-1|CAL26285.1| 112|Drosophila melanogaster CG17950 prot... 45 1e-04
AM294354-1|CAL26284.1| 112|Drosophila melanogaster CG17950 prot... 45 1e-04
AM294353-1|CAL26283.1| 112|Drosophila melanogaster CG17950 prot... 45 1e-04
AE013599-3267|AAM71011.1| 112|Drosophila melanogaster CG17950-P... 45 1e-04
AE013599-3266|AAF46759.1| 112|Drosophila melanogaster CG17950-P... 45 1e-04
X71139-1|CAA50469.1| 111|Drosophila melanogaster Hmg-Z protein ... 38 0.011
AY113439-1|AAM29444.1| 111|Drosophila melanogaster RE28596p pro... 38 0.011
AE013599-3264|AAM70934.1| 111|Drosophila melanogaster CG17921-P... 38 0.011
AE013599-3263|AAF46758.1| 111|Drosophila melanogaster CG17921-P... 38 0.011
X68408-1|CAA48471.1| 723|Drosophila melanogaster SSRP1 protein. 33 0.31
L08825-1|AAA28914.1| 723|Drosophila melanogaster single-strande... 33 0.31
BT004831-1|AAO45187.1| 723|Drosophila melanogaster SD06504p pro... 33 0.31
AE013599-3689|AAF47064.1| 723|Drosophila melanogaster CG4817-PA... 33 0.31
AY070828-1|AAL48450.1| 138|Drosophila melanogaster AT28425p pro... 33 0.54
AE014297-3170|AAF56011.1| 133|Drosophila melanogaster CG7046-PA... 33 0.54
AE014297-3169|AAF56010.1| 126|Drosophila melanogaster CG7045-PA... 33 0.54
AE014298-778|AAF46065.2| 1059|Drosophila melanogaster CG4096-PA ... 31 1.7
AY061457-1|AAL29005.1| 257|Drosophila melanogaster LD40493p pro... 29 8.8
AE014297-2817|AAF55779.2| 284|Drosophila melanogaster CG4217-PB... 29 8.8
AE014297-2816|AAN14356.1| 257|Drosophila melanogaster CG4217-PA... 29 8.8
AB045318-1|BAB20089.1| 257|Drosophila melanogaster mitochondria... 29 8.8
AB040745-1|BAB62223.1| 257|Drosophila melanogaster mitochondria... 29 8.8
>M21045-2|AAA28853.1| 151|Drosophila melanogaster protein (
D.melanogaster ribosomalprotein S14 A and B genes,
complete cds. ).
Length = 151
Score = 160 bits (389), Expect = 2e-39
Identities = 79/90 (87%), Positives = 81/90 (90%)
Frame = -2
Query: 526 PEKKQSAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKV 347
P K + KEEVQV LGPQ GE VFGVAHI+ASFNDTFVHVTDLSGRETIARVTGGMKV
Sbjct: 3 PRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGMKV 62
Query: 346 KADRDEASPYAAMLAAQDVAEKCKTLGITA 257
KADRDEASPYAAMLAAQDVAEKCKTLGITA
Sbjct: 63 KADRDEASPYAAMLAAQDVAEKCKTLGITA 92
Score = 46.8 bits (106), Expect = 3e-05
Identities = 27/48 (56%), Positives = 28/48 (58%)
Frame = -1
Query: 257 LHIKLRAXXXXXXXXXXXGAQXXXXXXXXXSMKIGRIEDVTPVPSDST 114
LHIKLRA GAQ SMKIGRIEDVTP+PSDST
Sbjct: 93 LHIKLRATGGNKTKTPGPGAQSALRALARSSMKIGRIEDVTPIPSDST 140
>M21045-1|AAA28852.1| 151|Drosophila melanogaster protein (
D.melanogaster ribosomalprotein S14 A and B genes,
complete cds. ).
Length = 151
Score = 160 bits (389), Expect = 2e-39
Identities = 79/90 (87%), Positives = 81/90 (90%)
Frame = -2
Query: 526 PEKKQSAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKV 347
P K + KEEVQV LGPQ GE VFGVAHI+ASFNDTFVHVTDLSGRETIARVTGGMKV
Sbjct: 3 PRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGMKV 62
Query: 346 KADRDEASPYAAMLAAQDVAEKCKTLGITA 257
KADRDEASPYAAMLAAQDVAEKCKTLGITA
Sbjct: 63 KADRDEASPYAAMLAAQDVAEKCKTLGITA 92
Score = 46.8 bits (106), Expect = 3e-05
Identities = 27/48 (56%), Positives = 28/48 (58%)
Frame = -1
Query: 257 LHIKLRAXXXXXXXXXXXGAQXXXXXXXXXSMKIGRIEDVTPVPSDST 114
LHIKLRA GAQ SMKIGRIEDVTP+PSDST
Sbjct: 93 LHIKLRATGGNKTKTPGPGAQSALRALARSSMKIGRIEDVTPIPSDST 140
>AY071321-1|AAL48943.1| 151|Drosophila melanogaster RE34379p
protein.
Length = 151
Score = 160 bits (389), Expect = 2e-39
Identities = 79/90 (87%), Positives = 81/90 (90%)
Frame = -2
Query: 526 PEKKQSAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKV 347
P K + KEEVQV LGPQ GE VFGVAHI+ASFNDTFVHVTDLSGRETIARVTGGMKV
Sbjct: 3 PRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGMKV 62
Query: 346 KADRDEASPYAAMLAAQDVAEKCKTLGITA 257
KADRDEASPYAAMLAAQDVAEKCKTLGITA
Sbjct: 63 KADRDEASPYAAMLAAQDVAEKCKTLGITA 92
Score = 46.8 bits (106), Expect = 3e-05
Identities = 27/48 (56%), Positives = 28/48 (58%)
Frame = -1
Query: 257 LHIKLRAXXXXXXXXXXXGAQXXXXXXXXXSMKIGRIEDVTPVPSDST 114
LHIKLRA GAQ SMKIGRIEDVTP+PSDST
Sbjct: 93 LHIKLRATGGNKTKTPGPGAQSALRALARSSMKIGRIEDVTPIPSDST 140
>AE014298-1091|AAF46299.1| 151|Drosophila melanogaster CG1527-PA
protein.
Length = 151
Score = 160 bits (389), Expect = 2e-39
Identities = 79/90 (87%), Positives = 81/90 (90%)
Frame = -2
Query: 526 PEKKQSAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKV 347
P K + KEEVQV LGPQ GE VFGVAHI+ASFNDTFVHVTDLSGRETIARVTGGMKV
Sbjct: 3 PRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGMKV 62
Query: 346 KADRDEASPYAAMLAAQDVAEKCKTLGITA 257
KADRDEASPYAAMLAAQDVAEKCKTLGITA
Sbjct: 63 KADRDEASPYAAMLAAQDVAEKCKTLGITA 92
Score = 46.8 bits (106), Expect = 3e-05
Identities = 27/48 (56%), Positives = 28/48 (58%)
Frame = -1
Query: 257 LHIKLRAXXXXXXXXXXXGAQXXXXXXXXXSMKIGRIEDVTPVPSDST 114
LHIKLRA GAQ SMKIGRIEDVTP+PSDST
Sbjct: 93 LHIKLRATGGNKTKTPGPGAQSALRALARSSMKIGRIEDVTPIPSDST 140
>AE014298-1090|AAF46297.1| 151|Drosophila melanogaster CG1524-PB,
isoform B protein.
Length = 151
Score = 160 bits (389), Expect = 2e-39
Identities = 79/90 (87%), Positives = 81/90 (90%)
Frame = -2
Query: 526 PEKKQSAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKV 347
P K + KEEVQV LGPQ GE VFGVAHI+ASFNDTFVHVTDLSGRETIARVTGGMKV
Sbjct: 3 PRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGMKV 62
Query: 346 KADRDEASPYAAMLAAQDVAEKCKTLGITA 257
KADRDEASPYAAMLAAQDVAEKCKTLGITA
Sbjct: 63 KADRDEASPYAAMLAAQDVAEKCKTLGITA 92
Score = 46.8 bits (106), Expect = 3e-05
Identities = 27/48 (56%), Positives = 28/48 (58%)
Frame = -1
Query: 257 LHIKLRAXXXXXXXXXXXGAQXXXXXXXXXSMKIGRIEDVTPVPSDST 114
LHIKLRA GAQ SMKIGRIEDVTP+PSDST
Sbjct: 93 LHIKLRATGGNKTKTPGPGAQSALRALARSSMKIGRIEDVTPIPSDST 140
>AE014298-1089|AAF46298.1| 151|Drosophila melanogaster CG1524-PA,
isoform A protein.
Length = 151
Score = 160 bits (389), Expect = 2e-39
Identities = 79/90 (87%), Positives = 81/90 (90%)
Frame = -2
Query: 526 PEKKQSAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKV 347
P K + KEEVQV LGPQ GE VFGVAHI+ASFNDTFVHVTDLSGRETIARVTGGMKV
Sbjct: 3 PRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGMKV 62
Query: 346 KADRDEASPYAAMLAAQDVAEKCKTLGITA 257
KADRDEASPYAAMLAAQDVAEKCKTLGITA
Sbjct: 63 KADRDEASPYAAMLAAQDVAEKCKTLGITA 92
Score = 46.8 bits (106), Expect = 3e-05
Identities = 27/48 (56%), Positives = 28/48 (58%)
Frame = -1
Query: 257 LHIKLRAXXXXXXXXXXXGAQXXXXXXXXXSMKIGRIEDVTPVPSDST 114
LHIKLRA GAQ SMKIGRIEDVTP+PSDST
Sbjct: 93 LHIKLRATGGNKTKTPGPGAQSALRALARSSMKIGRIEDVTPIPSDST 140
>AY070665-1|AAL48136.1| 123|Drosophila melanogaster RH04612p
protein.
Length = 123
Score = 127 bits (306), Expect = 2e-29
Identities = 62/73 (84%), Positives = 64/73 (87%)
Frame = -2
Query: 526 PEKKQSAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKV 347
P K + KEEVQV LGPQ GE VFGVAHI+ASFNDTFVHVTDLSGRETIARVTGGMKV
Sbjct: 3 PRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGMKV 62
Query: 346 KADRDEASPYAAM 308
KADRDEASPYAAM
Sbjct: 63 KADRDEASPYAAM 75
>X71138-1|CAA50468.1| 112|Drosophila melanogaster Hmg-D protein
protein.
Length = 112
Score = 44.8 bits (101), Expect = 1e-04
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +2
Query: 638 MTDKPKRPMSAYMLWLNSAR 697
M+DKPKRP+SAYMLWLNSAR
Sbjct: 1 MSDKPKRPLSAYMLWLNSAR 20
>M77023-1|AAA28609.1| 112|Drosophila melanogaster high mobility
group protein protein.
Length = 112
Score = 44.8 bits (101), Expect = 1e-04
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +2
Query: 638 MTDKPKRPMSAYMLWLNSAR 697
M+DKPKRP+SAYMLWLNSAR
Sbjct: 1 MSDKPKRPLSAYMLWLNSAR 20
>AY118333-1|AAM48362.1| 112|Drosophila melanogaster LD24628p
protein.
Length = 112
Score = 44.8 bits (101), Expect = 1e-04
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +2
Query: 638 MTDKPKRPMSAYMLWLNSAR 697
M+DKPKRP+SAYMLWLNSAR
Sbjct: 1 MSDKPKRPLSAYMLWLNSAR 20
>AM294363-1|CAL26293.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 44.8 bits (101), Expect = 1e-04
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +2
Query: 638 MTDKPKRPMSAYMLWLNSAR 697
M+DKPKRP+SAYMLWLNSAR
Sbjct: 1 MSDKPKRPLSAYMLWLNSAR 20
>AM294362-1|CAL26292.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 44.8 bits (101), Expect = 1e-04
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +2
Query: 638 MTDKPKRPMSAYMLWLNSAR 697
M+DKPKRP+SAYMLWLNSAR
Sbjct: 1 MSDKPKRPLSAYMLWLNSAR 20
>AM294361-1|CAL26291.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 44.8 bits (101), Expect = 1e-04
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +2
Query: 638 MTDKPKRPMSAYMLWLNSAR 697
M+DKPKRP+SAYMLWLNSAR
Sbjct: 1 MSDKPKRPLSAYMLWLNSAR 20
>AM294360-1|CAL26290.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 44.8 bits (101), Expect = 1e-04
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +2
Query: 638 MTDKPKRPMSAYMLWLNSAR 697
M+DKPKRP+SAYMLWLNSAR
Sbjct: 1 MSDKPKRPLSAYMLWLNSAR 20
>AM294359-1|CAL26289.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 44.8 bits (101), Expect = 1e-04
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +2
Query: 638 MTDKPKRPMSAYMLWLNSAR 697
M+DKPKRP+SAYMLWLNSAR
Sbjct: 1 MSDKPKRPLSAYMLWLNSAR 20
>AM294358-1|CAL26288.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 44.8 bits (101), Expect = 1e-04
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +2
Query: 638 MTDKPKRPMSAYMLWLNSAR 697
M+DKPKRP+SAYMLWLNSAR
Sbjct: 1 MSDKPKRPLSAYMLWLNSAR 20
>AM294357-1|CAL26287.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 44.8 bits (101), Expect = 1e-04
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +2
Query: 638 MTDKPKRPMSAYMLWLNSAR 697
M+DKPKRP+SAYMLWLNSAR
Sbjct: 1 MSDKPKRPLSAYMLWLNSAR 20
>AM294356-1|CAL26286.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 44.8 bits (101), Expect = 1e-04
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +2
Query: 638 MTDKPKRPMSAYMLWLNSAR 697
M+DKPKRP+SAYMLWLNSAR
Sbjct: 1 MSDKPKRPLSAYMLWLNSAR 20
>AM294355-1|CAL26285.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 44.8 bits (101), Expect = 1e-04
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +2
Query: 638 MTDKPKRPMSAYMLWLNSAR 697
M+DKPKRP+SAYMLWLNSAR
Sbjct: 1 MSDKPKRPLSAYMLWLNSAR 20
>AM294354-1|CAL26284.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 44.8 bits (101), Expect = 1e-04
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +2
Query: 638 MTDKPKRPMSAYMLWLNSAR 697
M+DKPKRP+SAYMLWLNSAR
Sbjct: 1 MSDKPKRPLSAYMLWLNSAR 20
>AM294353-1|CAL26283.1| 112|Drosophila melanogaster CG17950
protein.
Length = 112
Score = 44.8 bits (101), Expect = 1e-04
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +2
Query: 638 MTDKPKRPMSAYMLWLNSAR 697
M+DKPKRP+SAYMLWLNSAR
Sbjct: 1 MSDKPKRPLSAYMLWLNSAR 20
>AE013599-3267|AAM71011.1| 112|Drosophila melanogaster CG17950-PB,
isoform B protein.
Length = 112
Score = 44.8 bits (101), Expect = 1e-04
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +2
Query: 638 MTDKPKRPMSAYMLWLNSAR 697
M+DKPKRP+SAYMLWLNSAR
Sbjct: 1 MSDKPKRPLSAYMLWLNSAR 20
>AE013599-3266|AAF46759.1| 112|Drosophila melanogaster CG17950-PA,
isoform A protein.
Length = 112
Score = 44.8 bits (101), Expect = 1e-04
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +2
Query: 638 MTDKPKRPMSAYMLWLNSAR 697
M+DKPKRP+SAYMLWLNSAR
Sbjct: 1 MSDKPKRPLSAYMLWLNSAR 20
>X71139-1|CAA50469.1| 111|Drosophila melanogaster Hmg-Z protein
protein.
Length = 111
Score = 38.3 bits (85), Expect = 0.011
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +2
Query: 644 DKPKRPMSAYMLWLNSARNR 703
D+PKRP+SAYMLWLN R +
Sbjct: 4 DRPKRPLSAYMLWLNETREQ 23
>AY113439-1|AAM29444.1| 111|Drosophila melanogaster RE28596p
protein.
Length = 111
Score = 38.3 bits (85), Expect = 0.011
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +2
Query: 644 DKPKRPMSAYMLWLNSARNR 703
D+PKRP+SAYMLWLN R +
Sbjct: 4 DRPKRPLSAYMLWLNETREQ 23
>AE013599-3264|AAM70934.1| 111|Drosophila melanogaster CG17921-PB,
isoform B protein.
Length = 111
Score = 38.3 bits (85), Expect = 0.011
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +2
Query: 644 DKPKRPMSAYMLWLNSARNR 703
D+PKRP+SAYMLWLN R +
Sbjct: 4 DRPKRPLSAYMLWLNETREQ 23
>AE013599-3263|AAF46758.1| 111|Drosophila melanogaster CG17921-PA,
isoform A protein.
Length = 111
Score = 38.3 bits (85), Expect = 0.011
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +2
Query: 644 DKPKRPMSAYMLWLNSARNR 703
D+PKRP+SAYMLWLN R +
Sbjct: 4 DRPKRPLSAYMLWLNETREQ 23
>X68408-1|CAA48471.1| 723|Drosophila melanogaster SSRP1 protein.
Length = 723
Score = 33.5 bits (73), Expect = 0.31
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +2
Query: 626 KKVKMTDKPKRPMSAYMLWLNSAR 697
KK K + KPKR +A+MLWLN R
Sbjct: 547 KKKKDSGKPKRATTAFMLWLNDTR 570
>L08825-1|AAA28914.1| 723|Drosophila melanogaster single-stranded
recognition proteinprotein.
Length = 723
Score = 33.5 bits (73), Expect = 0.31
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +2
Query: 626 KKVKMTDKPKRPMSAYMLWLNSAR 697
KK K + KPKR +A+MLWLN R
Sbjct: 547 KKKKDSGKPKRATTAFMLWLNDTR 570
>BT004831-1|AAO45187.1| 723|Drosophila melanogaster SD06504p
protein.
Length = 723
Score = 33.5 bits (73), Expect = 0.31
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +2
Query: 626 KKVKMTDKPKRPMSAYMLWLNSAR 697
KK K + KPKR +A+MLWLN R
Sbjct: 547 KKKKDSGKPKRATTAFMLWLNDTR 570
>AE013599-3689|AAF47064.1| 723|Drosophila melanogaster CG4817-PA
protein.
Length = 723
Score = 33.5 bits (73), Expect = 0.31
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +2
Query: 626 KKVKMTDKPKRPMSAYMLWLNSAR 697
KK K + KPKR +A+MLWLN R
Sbjct: 547 KKKKDSGKPKRATTAFMLWLNDTR 570
>AY070828-1|AAL48450.1| 138|Drosophila melanogaster AT28425p
protein.
Length = 138
Score = 32.7 bits (71), Expect = 0.54
Identities = 11/15 (73%), Positives = 15/15 (100%)
Frame = +2
Query: 647 KPKRPMSAYMLWLNS 691
+PK+PMSA+MLW+NS
Sbjct: 7 RPKKPMSAFMLWMNS 21
>AE014297-3170|AAF56011.1| 133|Drosophila melanogaster CG7046-PA
protein.
Length = 133
Score = 32.7 bits (71), Expect = 0.54
Identities = 11/15 (73%), Positives = 15/15 (100%)
Frame = +2
Query: 647 KPKRPMSAYMLWLNS 691
+PK+PMSA+MLW+NS
Sbjct: 7 RPKKPMSAFMLWMNS 21
>AE014297-3169|AAF56010.1| 126|Drosophila melanogaster CG7045-PA
protein.
Length = 126
Score = 32.7 bits (71), Expect = 0.54
Identities = 11/15 (73%), Positives = 15/15 (100%)
Frame = +2
Query: 647 KPKRPMSAYMLWLNS 691
+PK+PMSA+MLW+NS
Sbjct: 7 RPKKPMSAFMLWMNS 21
>AE014298-778|AAF46065.2| 1059|Drosophila melanogaster CG4096-PA
protein.
Length = 1059
Score = 31.1 bits (67), Expect = 1.7
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -3
Query: 318 TLLCWRHRM*QRNAKLLA*RPSHKAPCYWWKQNKDPWSWCSV 193
TL CW H +R A+ P +WW PW +C V
Sbjct: 967 TLPCWTHAKNKRPARQSRGCGDQPCPAHWW---PGPWQFCPV 1005
>AY061457-1|AAL29005.1| 257|Drosophila melanogaster LD40493p
protein.
Length = 257
Score = 28.7 bits (61), Expect = 8.8
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +2
Query: 620 IRKKVKMTDKPKRPMSAYMLWLNSAR 697
+RK+VK +PK+P SA++ ++ S R
Sbjct: 146 LRKRVKELGRPKKPASAFLRFIASER 171
>AE014297-2817|AAF55779.2| 284|Drosophila melanogaster CG4217-PB,
isoform B protein.
Length = 284
Score = 28.7 bits (61), Expect = 8.8
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +2
Query: 620 IRKKVKMTDKPKRPMSAYMLWLNSAR 697
+RK+VK +PK+P SA++ ++ S R
Sbjct: 173 LRKRVKELGRPKKPASAFLRFIASER 198
>AE014297-2816|AAN14356.1| 257|Drosophila melanogaster CG4217-PA,
isoform A protein.
Length = 257
Score = 28.7 bits (61), Expect = 8.8
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +2
Query: 620 IRKKVKMTDKPKRPMSAYMLWLNSAR 697
+RK+VK +PK+P SA++ ++ S R
Sbjct: 146 LRKRVKELGRPKKPASAFLRFIASER 171
>AB045318-1|BAB20089.1| 257|Drosophila melanogaster mitochondrial
transcription factorA protein.
Length = 257
Score = 28.7 bits (61), Expect = 8.8
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +2
Query: 620 IRKKVKMTDKPKRPMSAYMLWLNSAR 697
+RK+VK +PK+P SA++ ++ S R
Sbjct: 146 LRKRVKELGRPKKPASAFLRFIASER 171
>AB040745-1|BAB62223.1| 257|Drosophila melanogaster mitochondrial
transcription factorA protein.
Length = 257
Score = 28.7 bits (61), Expect = 8.8
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +2
Query: 620 IRKKVKMTDKPKRPMSAYMLWLNSAR 697
+RK+VK +PK+P SA++ ++ S R
Sbjct: 146 LRKRVKELGRPKKPASAFLRFIASER 171
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,602,109
Number of Sequences: 53049
Number of extensions: 753511
Number of successful extensions: 1962
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1962
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3375989364
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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