Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30091
         (549 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   2.3  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    22   4.1  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   7.1  

>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = -2

Query: 149 TCYQLSLNK 123
           TCY+LSLNK
Sbjct: 310 TCYELSLNK 318


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 285 FLSCKYEQYSSLSPVALATSATFLL 359
           FLSC++ Q +S + +    SA  LL
Sbjct: 82  FLSCRFHQGASYNTLNTCRSALALL 106


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 163 YRSILAMKYLIFYFCFEYEHFLC 231
           +R  LA + +  YF F Y +FLC
Sbjct: 142 FREYLA-EAVQLYFQFYYTYFLC 163


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,644
Number of Sequences: 336
Number of extensions: 2163
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)