Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30087X
         (311 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    22   1.3  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   3.0  
AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical pro...    20   6.9  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    19   9.2  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          19   9.2  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    19   9.2  

>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 1.3
 Identities = 9/25 (36%), Positives = 10/25 (40%)
 Frame = +1

Query: 124 YFCNV*NFMMKKKYTLYERENTHAD 198
           + C   N    K Y L   E TH D
Sbjct: 80  FICKYCNRQFTKSYNLLIHERTHTD 104


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.0 bits (42), Expect = 3.0
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 77  RSDSLRPCLRWSNTKKKRTH 18
           +S SLRP  RWS     R++
Sbjct: 358 QSTSLRPFSRWSLCNSARSN 377


>AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical
           protein protein.
          Length = 95

 Score = 19.8 bits (39), Expect = 6.9
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +3

Query: 198 CDNKGVEGAVIGGNAS 245
           CD K V   VIGG  S
Sbjct: 36  CDEKHVSPHVIGGITS 51


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 104 DFINGQT*RRS 72
           DF+NG+T  RS
Sbjct: 18  DFVNGKTLHRS 28


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +3

Query: 141 KFYDEKEIYFI*TREHACRCDNKGV 215
           K+Y+ K++Y I +    C  D   V
Sbjct: 777 KYYEAKQVYRIGSNGLQCYIDRNVV 801


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 132 TKVVSQTNVRFY*W 91
           T++  QTN  FY W
Sbjct: 195 TQIHQQTNHTFYPW 208


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,122
Number of Sequences: 336
Number of extensions: 1233
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5730534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)