Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30086
(513 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42587-1|AAB17433.1| 299|Drosophila melanogaster ribosomal prot... 61 7e-10
BT025837-1|ABF85737.1| 299|Drosophila melanogaster IP11377p pro... 61 7e-10
AY118961-1|AAM50821.1| 299|Drosophila melanogaster LD40873p pro... 61 7e-10
AL132792-4|CAB60023.1| 299|Drosophila melanogaster EG:BACR19J1.... 61 7e-10
AF080131-1|AAD19341.1| 312|Drosophila melanogaster ribosomal pr... 61 7e-10
AE014298-104|AAF45546.1| 299|Drosophila melanogaster CG7434-PA ... 61 7e-10
AY089455-1|AAL90193.1| 312|Drosophila melanogaster AT26853p pro... 50 1e-06
AE013599-3561|AAF46972.1| 312|Drosophila melanogaster CG9871-PA... 50 1e-06
AE013599-1487|AAF58510.2| 246|Drosophila melanogaster CG13154-P... 30 2.1
BT023326-1|AAY55742.1| 245|Drosophila melanogaster IP10161p pro... 29 4.9
AE014134-2615|AAF53474.1| 254|Drosophila melanogaster CG7631-PA... 29 4.9
BT023938-1|ABB36442.1| 1103|Drosophila melanogaster RE04201p pro... 28 8.5
AY094813-1|AAM11166.1| 1413|Drosophila melanogaster LD30602p pro... 28 8.5
AE014134-2739|AAF53547.2| 1413|Drosophila melanogaster CG31738-P... 28 8.5
AE014134-2738|AAF53546.3| 1700|Drosophila melanogaster CG31738-P... 28 8.5
>U42587-1|AAB17433.1| 299|Drosophila melanogaster ribosomal protein
Rpl22 protein.
Length = 299
Score = 61.3 bits (142), Expect = 7e-10
Identities = 26/39 (66%), Positives = 33/39 (84%)
Frame = +1
Query: 136 NLKFTIDCTHPAEDSILDVGNFEKYLKEHVKVEGKTNNL 252
+L+FTIDCT+ AEDSI+DV +FEKY+K +KV GK NNL
Sbjct: 190 SLRFTIDCTNIAEDSIMDVADFEKYIKARLKVNGKVNNL 228
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/57 (36%), Positives = 30/57 (52%)
Frame = +3
Query: 255 NHVVVARDKTKVAITADIPFSXXXXXXXXXXXXXXXXXXDWLRVVASAHDAYELRYF 425
N+V R K K+ +++D+ FS DW+RVVA+ D+YELRYF
Sbjct: 230 NNVTFERSKLKLIVSSDVHFSKAYLKYLTKKYLKKNSLRDWIRVVANEKDSYELRYF 286
>BT025837-1|ABF85737.1| 299|Drosophila melanogaster IP11377p
protein.
Length = 299
Score = 61.3 bits (142), Expect = 7e-10
Identities = 26/39 (66%), Positives = 33/39 (84%)
Frame = +1
Query: 136 NLKFTIDCTHPAEDSILDVGNFEKYLKEHVKVEGKTNNL 252
+L+FTIDCT+ AEDSI+DV +FEKY+K +KV GK NNL
Sbjct: 190 SLRFTIDCTNIAEDSIMDVADFEKYIKARLKVNGKVNNL 228
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/57 (36%), Positives = 30/57 (52%)
Frame = +3
Query: 255 NHVVVARDKTKVAITADIPFSXXXXXXXXXXXXXXXXXXDWLRVVASAHDAYELRYF 425
N+V R K K+ +++D+ FS DW+RVVA+ D+YELRYF
Sbjct: 230 NNVTFERSKLKLIVSSDVHFSKAYLKYLTKKYLKKNSLRDWIRVVANEKDSYELRYF 286
>AY118961-1|AAM50821.1| 299|Drosophila melanogaster LD40873p
protein.
Length = 299
Score = 61.3 bits (142), Expect = 7e-10
Identities = 26/39 (66%), Positives = 33/39 (84%)
Frame = +1
Query: 136 NLKFTIDCTHPAEDSILDVGNFEKYLKEHVKVEGKTNNL 252
+L+FTIDCT+ AEDSI+DV +FEKY+K +KV GK NNL
Sbjct: 190 SLRFTIDCTNIAEDSIMDVADFEKYIKARLKVNGKVNNL 228
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/57 (36%), Positives = 30/57 (52%)
Frame = +3
Query: 255 NHVVVARDKTKVAITADIPFSXXXXXXXXXXXXXXXXXXDWLRVVASAHDAYELRYF 425
N+V R K K+ +++D+ FS DW+RVVA+ D+YELRYF
Sbjct: 230 NNVTFERSKLKLIVSSDVHFSKAYLKYLTKKYLKKNSLRDWIRVVANEKDSYELRYF 286
>AL132792-4|CAB60023.1| 299|Drosophila melanogaster
EG:BACR19J1.4,FBgn0015288;RpL22 protein.
Length = 299
Score = 61.3 bits (142), Expect = 7e-10
Identities = 26/39 (66%), Positives = 33/39 (84%)
Frame = +1
Query: 136 NLKFTIDCTHPAEDSILDVGNFEKYLKEHVKVEGKTNNL 252
+L+FTIDCT+ AEDSI+DV +FEKY+K +KV GK NNL
Sbjct: 190 SLRFTIDCTNIAEDSIMDVADFEKYIKARLKVNGKVNNL 228
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/57 (36%), Positives = 30/57 (52%)
Frame = +3
Query: 255 NHVVVARDKTKVAITADIPFSXXXXXXXXXXXXXXXXXXDWLRVVASAHDAYELRYF 425
N+V R K K+ +++D+ FS DW+RVVA+ D+YELRYF
Sbjct: 230 NNVTFERSKLKLIVSSDVHFSKAYLKYLTKKYLKKNSLRDWIRVVANEKDSYELRYF 286
>AF080131-1|AAD19341.1| 312|Drosophila melanogaster ribosomal
protein L22 protein.
Length = 312
Score = 61.3 bits (142), Expect = 7e-10
Identities = 26/39 (66%), Positives = 33/39 (84%)
Frame = +1
Query: 136 NLKFTIDCTHPAEDSILDVGNFEKYLKEHVKVEGKTNNL 252
+L+FTIDCT+ AEDSI+DV +FEKY+K +KV GK NNL
Sbjct: 203 SLRFTIDCTNIAEDSIMDVADFEKYIKARLKVNGKVNNL 241
Score = 46.0 bits (104), Expect = 3e-05
Identities = 21/57 (36%), Positives = 30/57 (52%)
Frame = +3
Query: 255 NHVVVARDKTKVAITADIPFSXXXXXXXXXXXXXXXXXXDWLRVVASAHDAYELRYF 425
N+V R K K+ +++D+ FS DW+RVVA+ D+YELRYF
Sbjct: 243 NNVTFERSKLKLTVSSDVHFSKAYLKYLTKKYLKKNSLRDWIRVVANEKDSYELRYF 299
>AE014298-104|AAF45546.1| 299|Drosophila melanogaster CG7434-PA
protein.
Length = 299
Score = 61.3 bits (142), Expect = 7e-10
Identities = 26/39 (66%), Positives = 33/39 (84%)
Frame = +1
Query: 136 NLKFTIDCTHPAEDSILDVGNFEKYLKEHVKVEGKTNNL 252
+L+FTIDCT+ AEDSI+DV +FEKY+K +KV GK NNL
Sbjct: 190 SLRFTIDCTNIAEDSIMDVADFEKYIKARLKVNGKVNNL 228
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/57 (36%), Positives = 30/57 (52%)
Frame = +3
Query: 255 NHVVVARDKTKVAITADIPFSXXXXXXXXXXXXXXXXXXDWLRVVASAHDAYELRYF 425
N+V R K K+ +++D+ FS DW+RVVA+ D+YELRYF
Sbjct: 230 NNVTFERSKLKLIVSSDVHFSKAYLKYLTKKYLKKNSLRDWIRVVANEKDSYELRYF 286
>AY089455-1|AAL90193.1| 312|Drosophila melanogaster AT26853p
protein.
Length = 312
Score = 50.4 bits (115), Expect = 1e-06
Identities = 20/38 (52%), Positives = 28/38 (73%)
Frame = +1
Query: 142 KFTIDCTHPAEDSILDVGNFEKYLKEHVKVEGKTNNLR 255
+F IDC AED ILD+ +FE+YLK H+K++ K N L+
Sbjct: 193 RFVIDCACVAEDMILDLADFEQYLKTHIKIKNKLNQLK 230
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = +3
Query: 252 KNHVVVARDKT-KVAITADIPFSXXXXXXXXXXXXXXXXXXDWLRVVASAHDAYELRYF 425
K+ V R K + I + + FS DWLRVV++A D + + YF
Sbjct: 230 KDQVTFERTKNFSLIIHSGVHFSKRYFKYLTKRYLKKVSLRDWLRVVSTAKDTFAMTYF 288
>AE013599-3561|AAF46972.1| 312|Drosophila melanogaster CG9871-PA
protein.
Length = 312
Score = 50.4 bits (115), Expect = 1e-06
Identities = 20/38 (52%), Positives = 28/38 (73%)
Frame = +1
Query: 142 KFTIDCTHPAEDSILDVGNFEKYLKEHVKVEGKTNNLR 255
+F IDC AED ILD+ +FE+YLK H+K++ K N L+
Sbjct: 193 RFVIDCACVAEDMILDLADFEQYLKTHIKIKNKLNQLK 230
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = +3
Query: 252 KNHVVVARDKT-KVAITADIPFSXXXXXXXXXXXXXXXXXXDWLRVVASAHDAYELRYF 425
K+ V R K + I + + FS DWLRVV++A D + + YF
Sbjct: 230 KDQVTFERTKNFSLIIHSGVHFSKRYFKYLTKRYLKKVSLRDWLRVVSTAKDTFAMTYF 288
>AE013599-1487|AAF58510.2| 246|Drosophila melanogaster CG13154-PA
protein.
Length = 246
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 1 LYTCSFATMAVTKKPVAKKAQLH 69
L+ C+F V K P A++AQLH
Sbjct: 13 LFLCAFCCSVVAKPPTARRAQLH 35
>BT023326-1|AAY55742.1| 245|Drosophila melanogaster IP10161p
protein.
Length = 245
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -2
Query: 293 SDFRLIPGDDNVILRLFVLPSTLTCSFK 210
S R +P D++ LFVLPST CS K
Sbjct: 82 SCIRFVPADEDEENYLFVLPSTSGCSSK 109
>AE014134-2615|AAF53474.1| 254|Drosophila melanogaster CG7631-PA
protein.
Length = 254
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -2
Query: 293 SDFRLIPGDDNVILRLFVLPSTLTCSFK 210
S R +P D++ LFVLPST CS K
Sbjct: 91 SCIRFVPADEDEENYLFVLPSTSGCSSK 118
>BT023938-1|ABB36442.1| 1103|Drosophila melanogaster RE04201p
protein.
Length = 1103
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -1
Query: 351 GNVLLNT-SGTSLKKECLR**RLSSYPWRRQRDS 253
G+ LNT GT L+ ECL+ R SSY +R + ++
Sbjct: 207 GHGFLNTYKGTELQTECLQLRRASSYQFRLRSEN 240
>AY094813-1|AAM11166.1| 1413|Drosophila melanogaster LD30602p
protein.
Length = 1413
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -1
Query: 351 GNVLLNT-SGTSLKKECLR**RLSSYPWRRQRDS 253
G+ LNT GT L+ ECL+ R SSY +R + ++
Sbjct: 517 GHGFLNTYKGTELQTECLQLRRASSYQFRLRSEN 550
>AE014134-2739|AAF53547.2| 1413|Drosophila melanogaster CG31738-PA,
isoform A protein.
Length = 1413
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -1
Query: 351 GNVLLNT-SGTSLKKECLR**RLSSYPWRRQRDS 253
G+ LNT GT L+ ECL+ R SSY +R + ++
Sbjct: 517 GHGFLNTYKGTELQTECLQLRRASSYQFRLRSEN 550
>AE014134-2738|AAF53546.3| 1700|Drosophila melanogaster CG31738-PB,
isoform B protein.
Length = 1700
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -1
Query: 351 GNVLLNT-SGTSLKKECLR**RLSSYPWRRQRDS 253
G+ LNT GT L+ ECL+ R SSY +R + ++
Sbjct: 804 GHGFLNTYKGTELQTECLQLRRASSYQFRLRSEN 837
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,781,661
Number of Sequences: 53049
Number of extensions: 324162
Number of successful extensions: 653
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 653
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1867000320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -