Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30084
(658 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U67956-1|AAB07690.2| 157|Caenorhabditis elegans Hypothetical pr... 56 3e-08
Z47069-3|CAE17781.1| 141|Caenorhabditis elegans Hypothetical pr... 54 1e-07
AL110500-20|CAI79282.1| 110|Caenorhabditis elegans Hypothetical... 48 8e-06
AL110500-18|CAB54478.1| 118|Caenorhabditis elegans Hypothetical... 42 3e-04
Z81464-6|CAB03856.2| 102|Caenorhabditis elegans Hypothetical pr... 38 0.005
AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical... 34 0.10
AL032626-6|CAA21526.1| 132|Caenorhabditis elegans Hypothetical ... 34 0.10
AF068714-8|AAC17809.2| 86|Caenorhabditis elegans Hypothetical ... 34 0.10
U23486-8|AAC46779.3| 1025|Caenorhabditis elegans Nmda class glut... 33 0.18
AF318613-1|AAK01101.2| 1025|Caenorhabditis elegans NMDA-type ion... 33 0.18
AL032626-23|CAE17974.1| 88|Caenorhabditis elegans Hypothetical... 32 0.31
Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical pr... 31 0.72
AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical ... 31 0.72
U53141-8|AAA96110.3| 572|Caenorhabditis elegans Prion-like-(q/n... 30 1.3
AF068714-9|AAC17810.1| 87|Caenorhabditis elegans Hypothetical ... 30 1.3
Z69663-5|CAA93512.2| 1002|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z69661-8|CAA93496.2| 1002|Caenorhabditis elegans Hypothetical pr... 30 1.7
DQ178241-1|ABA18180.1| 1010|Caenorhabditis elegans argonaute-lik... 30 1.7
AF016682-2|AAO38604.1| 891|Caenorhabditis elegans Argonaute (pl... 30 1.7
AF016682-1|AAB66187.2| 910|Caenorhabditis elegans Argonaute (pl... 30 1.7
AF067607-7|AAF98613.1| 433|Caenorhabditis elegans Serpentine re... 29 3.8
AC084153-15|AAK84589.2| 152|Caenorhabditis elegans Hypothetical... 29 3.8
AC006810-2|AAF59631.2| 297|Caenorhabditis elegans Hypothetical ... 29 3.8
U23147-4|AAC46689.1| 464|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical p... 28 6.7
Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical p... 28 6.7
Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical p... 28 6.7
Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical p... 28 6.7
Z35595-11|CAJ34992.1| 769|Caenorhabditis elegans Hypothetical p... 28 6.7
AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor tyro... 28 6.7
AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor tyro... 28 6.7
>U67956-1|AAB07690.2| 157|Caenorhabditis elegans Hypothetical
protein F16F9.1 protein.
Length = 157
Score = 55.6 bits (128), Expect = 3e-08
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = +2
Query: 32 LLCLIGCCPCACIPYCTDSCKDANHYCPNCNAYIGSYNR 148
+L LI P A +P+C DSCKDA+HYCP CNA +G R
Sbjct: 117 ILVLICFFPLAFVPFCLDSCKDAHHYCPRCNALLGIKKR 155
>Z47069-3|CAE17781.1| 141|Caenorhabditis elegans Hypothetical
protein F36G3.3 protein.
Length = 141
Score = 53.6 bits (123), Expect = 1e-07
Identities = 22/45 (48%), Positives = 26/45 (57%)
Frame = +2
Query: 14 THLFALLLCLIGCCPCACIPYCTDSCKDANHYCPNCNAYIGSYNR 148
T +F L L GC C +P+C SCKD H CPNC A IG + R
Sbjct: 96 TWIFFAALFLFGCWCCCFLPFCLRSCKDIIHTCPNCRAMIGVHRR 140
>AL110500-20|CAI79282.1| 110|Caenorhabditis elegans Hypothetical
protein Y87G2A.19 protein.
Length = 110
Score = 47.6 bits (108), Expect = 8e-06
Identities = 15/27 (55%), Positives = 22/27 (81%)
Frame = +2
Query: 68 IPYCTDSCKDANHYCPNCNAYIGSYNR 148
+P+C ++ KDA HYCP+C A+IG+Y R
Sbjct: 79 VPFCVETFKDAEHYCPSCRAWIGTYRR 105
>AL110500-18|CAB54478.1| 118|Caenorhabditis elegans Hypothetical
protein Y87G2A.18 protein.
Length = 118
Score = 42.3 bits (95), Expect = 3e-04
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +2
Query: 29 LLLCLIGCCPCACIPYCTDSCKDANHYCPNCNAYIGSYNR 148
+ L +I C C C+P+ D D NH CP C ++G +NR
Sbjct: 79 IFLFIIPWCFC-CVPFFLDQLLDVNHSCPACKKFLGRFNR 117
>Z81464-6|CAB03856.2| 102|Caenorhabditis elegans Hypothetical
protein C08E8.1 protein.
Length = 102
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Frame = +2
Query: 32 LLCLIGCCPCACIPY----CTDSCKDANHYCPNCNAYIGSYNR 148
L+C G C C P+ C D KD NH CP+C + NR
Sbjct: 57 LICFFGTVLC-CFPFLFFLCCDVSKDVNHNCPSCGMLLAKKNR 98
>AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical
protein Y41C4A.11 protein.
Length = 386
Score = 33.9 bits (74), Expect = 0.10
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = +2
Query: 32 LLCLIGC---CPCACIPYCTDSCKDANHYCPNCNAYIGSYNR 148
L+C G C I C D KD +H CPNC + + NR
Sbjct: 57 LICFFGTFLFCWPILICLCFDVSKDVDHNCPNCGLLLATSNR 98
>AL032626-6|CAA21526.1| 132|Caenorhabditis elegans Hypothetical
protein Y37D8A.6 protein.
Length = 132
Score = 33.9 bits (74), Expect = 0.10
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +2
Query: 29 LLLCLIGCCPCACIPYCTDSCKDANHYCPNCNAYIGSYNR 148
L L L P C +C D KD+ H CPNC + SY R
Sbjct: 94 LFLGLFVFFPLLCC-FCLDGFKDSRHSCPNCGTIL-SYKR 131
>AF068714-8|AAC17809.2| 86|Caenorhabditis elegans Hypothetical
protein B0348.2 protein.
Length = 86
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Frame = +2
Query: 8 TKTHLFAL--LLCLIGCCPCACIPY--CTDSCKDANHYCPNCNAYI 133
T+T L A ++ +IGC I Y C DS KD HYCP+C +
Sbjct: 34 TETQLGACWWVVFIIGCLLFWPICYWLCCDSSKDTMHYCPSCGTLL 79
>U23486-8|AAC46779.3| 1025|Caenorhabditis elegans Nmda class glutamate
receptor protein1 protein.
Length = 1025
Score = 33.1 bits (72), Expect = 0.18
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +2
Query: 11 KTHLFALLLCLIGCC----PCACIPYCTDSCKDANHYCPNCNAYIGSYNR 148
+T LFA L C + PC+ +P S D H CP C+ +G + R
Sbjct: 968 ETGLFAFLSCFLFAILFLWPCSPLPCFLSSFSDFVHICPLCSHIMGRFRR 1017
>AF318613-1|AAK01101.2| 1025|Caenorhabditis elegans NMDA-type
ionotropic glutamatereceptor NMR-1 protein.
Length = 1025
Score = 33.1 bits (72), Expect = 0.18
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +2
Query: 11 KTHLFALLLCLIGCC----PCACIPYCTDSCKDANHYCPNCNAYIGSYNR 148
+T LFA L C + PC+ +P S D H CP C+ +G + R
Sbjct: 968 ETGLFAFLSCFLFAILFLWPCSPLPCFLSSFSDFVHICPLCSHIMGRFRR 1017
>AL032626-23|CAE17974.1| 88|Caenorhabditis elegans Hypothetical
protein Y37D8A.26 protein.
Length = 88
Score = 32.3 bits (70), Expect = 0.31
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +2
Query: 23 FALLL-CLIGCCPCACIPYCTDSCKDANHYCPNCNAYIGSYNR 148
FAL + CL PC + + D +H CPNCN +G +R
Sbjct: 47 FALFITCLF--LPCFIVCFWCRCFMDVHHRCPNCNKSLGKRDR 87
>Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical
protein T02C1.1 protein.
Length = 160
Score = 31.1 bits (67), Expect = 0.72
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +2
Query: 38 CLIGCCPCACIPYCTDSCKDANHYCPNCNAYIGS--YNR*IFQLVQ*IINCKNNILVLLF 211
C+I C C +C +S + N CP C A+ G+ NR + L ++ + NI +
Sbjct: 19 CIIECGHSYC-RFCIESHLNINEKCPLCRAHTGNPIRNRQLESLTMSYVSSR-NISTEYY 76
Query: 212 NSILSYELSIALNRFAFYL 268
+ SY+ + L A +
Sbjct: 77 ERMKSYQKKLLLQNRALVI 95
>AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical
protein Y40H7A.11 protein.
Length = 124
Score = 31.1 bits (67), Expect = 0.72
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +2
Query: 29 LLLCLIGCCPCACIPYCTDSCKDANHYCPNCNAYIGSYNR 148
L C CC P KDA H+CPNC + + R
Sbjct: 88 LSFCFFFCCYLLFFPIT----KDAQHFCPNCGSLLAVRTR 123
>U53141-8|AAA96110.3| 572|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 13
protein.
Length = 572
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 5/34 (14%)
Frame = +2
Query: 53 CPCACIPYCTDSCKDANHYC-----PNCNAYIGS 139
CP AC P C+ C A + C P+C + GS
Sbjct: 385 CPSACQPSCSQQCIQAQNLCQSACQPSCQSSCGS 418
>AF068714-9|AAC17810.1| 87|Caenorhabditis elegans Hypothetical
protein B0348.1 protein.
Length = 87
Score = 30.3 bits (65), Expect = 1.3
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 65 CIPYCTDSCKDANHYCPNCNAYIGS 139
C C S KD HYCP+C + +
Sbjct: 57 CYWLCCQSSKDTLHYCPSCGTLLAT 81
>Z69663-5|CAA93512.2| 1002|Caenorhabditis elegans Hypothetical
protein F48F7.1 protein.
Length = 1002
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/27 (48%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +3
Query: 81 RTPAKMQTITVRIAT-RTLEATIAKYF 158
R PA+ QT +++ T +T+E T+AKYF
Sbjct: 429 RRPAQTQTFPLQLETGQTIECTVAKYF 455
>Z69661-8|CAA93496.2| 1002|Caenorhabditis elegans Hypothetical
protein F48F7.1 protein.
Length = 1002
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/27 (48%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +3
Query: 81 RTPAKMQTITVRIAT-RTLEATIAKYF 158
R PA+ QT +++ T +T+E T+AKYF
Sbjct: 429 RRPAQTQTFPLQLETGQTIECTVAKYF 455
>DQ178241-1|ABA18180.1| 1010|Caenorhabditis elegans argonaute-like
protein.
Length = 1010
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/27 (48%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +3
Query: 81 RTPAKMQTITVRIAT-RTLEATIAKYF 158
R PA+ QT +++ T +T+E T+AKYF
Sbjct: 437 RRPAQTQTFPLQLETGQTIECTVAKYF 463
>AF016682-2|AAO38604.1| 891|Caenorhabditis elegans Argonaute
(plant)-like gene protein2, isoform b protein.
Length = 891
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/27 (48%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +3
Query: 81 RTPAKMQTITVRIAT-RTLEATIAKYF 158
R PA+ QT +++ T +T+E T+AKYF
Sbjct: 315 RRPAQTQTFPLQLETGQTIECTVAKYF 341
>AF016682-1|AAB66187.2| 910|Caenorhabditis elegans Argonaute
(plant)-like gene protein2, isoform a protein.
Length = 910
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/27 (48%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +3
Query: 81 RTPAKMQTITVRIAT-RTLEATIAKYF 158
R PA+ QT +++ T +T+E T+AKYF
Sbjct: 334 RRPAQTQTFPLQLETGQTIECTVAKYF 360
>AF067607-7|AAF98613.1| 433|Caenorhabditis elegans Serpentine
receptor, class t protein59 protein.
Length = 433
Score = 28.7 bits (61), Expect = 3.8
Identities = 21/86 (24%), Positives = 34/86 (39%)
Frame = +2
Query: 38 CLIGCCPCACIPYCTDSCKDANHYCPNCNAYIGSYNR*IFQLVQ*IINCKNNILVLLFNS 217
C +G C CI + C D NH P +IG + +I I + F
Sbjct: 255 CWMGSCS-TCILLAANRCSDINHNLPIRKMFIGKN-----VYITMMIPATYTIYAMFFTK 308
Query: 218 ILSYELSIALNRFAFYLEEQIGLNVF 295
+ ++ N +++ +GLNVF
Sbjct: 309 PIIFD----SNYMSWFFNPNLGLNVF 330
>AC084153-15|AAK84589.2| 152|Caenorhabditis elegans Hypothetical
protein Y22D7AL.15 protein.
Length = 152
Score = 28.7 bits (61), Expect = 3.8
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = +2
Query: 77 CTDSCKDANHYCPNCNAYIGSYNR 148
C KD H+CPNC + R
Sbjct: 127 CCAGSKDVKHFCPNCGTMLACKKR 150
>AC006810-2|AAF59631.2| 297|Caenorhabditis elegans Hypothetical
protein Y5H2B.4 protein.
Length = 297
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = -3
Query: 338 TLYCKIKLCFYMYPQTHLDL-FVLQGKKRIYL---VLCSVHSSK*N*IT 204
TL C + LCFY Y T+ + ++L I L +L +H S+ N +T
Sbjct: 162 TLSCSLNLCFYQYWTTYKTIVYILTFLSTIVLTCKLLLKIHESQSNNLT 210
>U23147-4|AAC46689.1| 464|Caenorhabditis elegans Hypothetical
protein C18H9.5 protein.
Length = 464
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +2
Query: 239 IALNRFA-FYLEEQIGLNVFEDTYKNRV-LFYSIMYKFS 349
I LN + YL + +GLN+ E Y N + F++ + KF+
Sbjct: 282 ICLNNYGPIYLNKVLGLNIRETGYSNAIPYFFAAIVKFA 320
>Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 23 FALLLCLIGCCPCAC-IPYCTDSCKDANHYCPNCNAYIGS 139
F+LLL L+ CC C C + + N +C + + I S
Sbjct: 450 FSLLLLLLFCCACCCRAKKKSQKTRHQNAHCSSAPSVINS 489
>Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 23 FALLLCLIGCCPCAC-IPYCTDSCKDANHYCPNCNAYIGS 139
F+LLL L+ CC C C + + N +C + + I S
Sbjct: 476 FSLLLLLLFCCACCCRAKKKSQKTRHQNAHCSSAPSVINS 515
>Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 23 FALLLCLIGCCPCAC-IPYCTDSCKDANHYCPNCNAYIGS 139
F+LLL L+ CC C C + + N +C + + I S
Sbjct: 450 FSLLLLLLFCCACCCRAKKKSQKTRHQNAHCSSAPSVINS 489
>Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 23 FALLLCLIGCCPCAC-IPYCTDSCKDANHYCPNCNAYIGS 139
F+LLL L+ CC C C + + N +C + + I S
Sbjct: 476 FSLLLLLLFCCACCCRAKKKSQKTRHQNAHCSSAPSVINS 515
>Z35595-11|CAJ34992.1| 769|Caenorhabditis elegans Hypothetical
protein C01G6.8c protein.
Length = 769
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 23 FALLLCLIGCCPCAC-IPYCTDSCKDANHYCPNCNAYIGS 139
F+LLL L+ CC C C + + N +C + + I S
Sbjct: 317 FSLLLLLLFCCACCCRAKKKSQKTRHQNAHCSSAPSVINS 356
>AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor
tyrosine kinase protein.
Length = 902
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 23 FALLLCLIGCCPCAC-IPYCTDSCKDANHYCPNCNAYIGS 139
F+LLL L+ CC C C + + N +C + + I S
Sbjct: 450 FSLLLLLLFCCACCCRAKKKSQKTRHQNAHCSSAPSVINS 489
>AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor
tyrosine kinase protein.
Length = 928
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 23 FALLLCLIGCCPCAC-IPYCTDSCKDANHYCPNCNAYIGS 139
F+LLL L+ CC C C + + N +C + + I S
Sbjct: 476 FSLLLLLLFCCACCCRAKKKSQKTRHQNAHCSSAPSVINS 515
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,247,719
Number of Sequences: 27780
Number of extensions: 306868
Number of successful extensions: 1004
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1003
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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