Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30077
(698 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 159 3e-39
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 147 7e-36
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 146 1e-35
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 127 7e-30
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 111 5e-25
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_40385| Best HMM Match : Kelch_1 (HMM E-Value=0) 36 0.032
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.39
SB_13773| Best HMM Match : TolA (HMM E-Value=0.042) 32 0.51
SB_43252| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.68
SB_20161| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.68
SB_17273| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 30 1.6
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_57319| Best HMM Match : Pox_A_type_inc (HMM E-Value=6.3e-06) 30 2.1
SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_15994| Best HMM Match : Pox_A_type_inc (HMM E-Value=2e-06) 30 2.1
SB_49603| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_54255| Best HMM Match : DUF329 (HMM E-Value=7.8) 29 2.7
SB_3878| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_42043| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_3733| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_28298| Best HMM Match : IncA (HMM E-Value=0.32) 29 4.8
SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17) 29 4.8
SB_1333| Best HMM Match : IncA (HMM E-Value=0.32) 29 4.8
SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_54258| Best HMM Match : ubiquitin (HMM E-Value=0.00055) 28 6.3
SB_7914| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_42254| Best HMM Match : PH (HMM E-Value=5.5e-19) 28 8.4
SB_15392| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_4570| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_2761| Best HMM Match : zf-TRAF (HMM E-Value=0.26) 28 8.4
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 159 bits (385), Expect = 3e-39
Identities = 73/87 (83%), Positives = 82/87 (94%)
Frame = +1
Query: 4 NNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSK 183
NNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSA++KST KENKITITNDKGRLSK
Sbjct: 455 NNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSK 514
Query: 184 EEIERMVNEAEKYRNEDDKQKETIRPR 264
E+IERMVNEA KY+ ED+KQ++ I+ +
Sbjct: 515 EDIERMVNEASKYKEEDEKQRDRIQTK 541
Score = 131 bits (317), Expect = 5e-31
Identities = 55/84 (65%), Positives = 72/84 (85%)
Frame = +3
Query: 255 QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQ 434
Q KN+LESY +SMKST+ED+K+K+KIS+ DK+ ILDKC + +KWLD+NQ A+K+E+E+ Q
Sbjct: 539 QTKNSLESYAYSMKSTVEDDKVKDKISEEDKKAILDKCTEVLKWLDTNQTAEKDEFEYHQ 598
Query: 435 KELEGICNPIITKMYQGAGGVPGG 506
KELE +CNPIITK+YQ AGG P G
Sbjct: 599 KELEKVCNPIITKLYQQAGGAPPG 622
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 147 bits (357), Expect = 7e-36
Identities = 67/88 (76%), Positives = 80/88 (90%)
Frame = +1
Query: 1 DNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLS 180
DNNLLGKFEL+GIPPAPRGVPQI+VTFD+D+NGILNVSA++KST KENKITITNDKGRLS
Sbjct: 546 DNNLLGKFELSGIPPAPRGVPQIDVTFDVDSNGILNVSAVDKSTGKENKITITNDKGRLS 605
Query: 181 KEEIERMVNEAEKYRNEDDKQKETIRPR 264
KE+IERMV EAEK++ D+ +E I+ +
Sbjct: 606 KEDIERMVKEAEKFKAADEAVRERIQSK 633
Score = 123 bits (296), Expect = 2e-28
Identities = 51/83 (61%), Positives = 69/83 (83%)
Frame = +3
Query: 255 QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQ 434
Q+KN+LESY FSMKSTMEDEK+K+K+S+ +++ ++ +C T+ WL+ NQ A+KEE + Q
Sbjct: 631 QSKNSLESYAFSMKSTMEDEKVKDKLSEDEREKVISRCKATLDWLEHNQSAEKEEIDAHQ 690
Query: 435 KELEGICNPIITKMYQGAGGVPG 503
KELEG+CNPIITK+YQGAGG G
Sbjct: 691 KELEGVCNPIITKLYQGAGGAGG 713
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 146 bits (355), Expect = 1e-35
Identities = 68/87 (78%), Positives = 78/87 (89%)
Frame = +1
Query: 4 NNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSK 183
NNLLGKF+L+GIPPAPRGVPQIEVTFDIDANGILNVSA +KST K ITITNDKGRLSK
Sbjct: 454 NNLLGKFDLSGIPPAPRGVPQIEVTFDIDANGILNVSAKDKSTGKTGSITITNDKGRLSK 513
Query: 184 EEIERMVNEAEKYRNEDDKQKETIRPR 264
EEI+RM+N+AEKY++ED+ Q+E I R
Sbjct: 514 EEIDRMINDAEKYKSEDEAQREKIAAR 540
Score = 91.5 bits (217), Expect = 6e-19
Identities = 38/84 (45%), Positives = 61/84 (72%), Gaps = 2/84 (2%)
Frame = +3
Query: 258 AKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQK 437
A+N LESY F +KS + + L+ K+S SDK T+ +K + + WL+ N LA+KEE+E ++K
Sbjct: 539 ARNRLESYAFGVKSAISEPSLEGKLSQSDKDTVKNKVEEVLNWLEKNSLAEKEEFEEQEK 598
Query: 438 ELEGICNPIITKMYQGAGG--VPG 503
EL+ +C+PI+ K++ G+GG +PG
Sbjct: 599 ELQRVCSPIMAKVHGGSGGTQMPG 622
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 127 bits (307), Expect = 7e-30
Identities = 59/88 (67%), Positives = 71/88 (80%)
Frame = +1
Query: 1 DNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLS 180
DN+ LGKF+L GIPPAPRGVPQIEVTF+ID NGIL VSA +K T + KITITND+ RL+
Sbjct: 1147 DNHPLGKFDLNGIPPAPRGVPQIEVTFEIDVNGILRVSAEDKGTGNKEKITITNDQNRLT 1206
Query: 181 KEEIERMVNEAEKYRNEDDKQKETIRPR 264
E+IERMVN+AEK+ +ED K KE + R
Sbjct: 1207 PEDIERMVNDAEKFADEDKKTKEKVEAR 1234
Score = 58.0 bits (134), Expect = 7e-09
Identities = 26/70 (37%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Frame = +3
Query: 255 QAKNALESYCFSMKSTMED-EKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHK 431
+A+N LESY +S+K+ + D EKL K+S+ DK+TI + I W+D NQ A E+++ +
Sbjct: 1232 EARNELESYAYSLKNQVGDKEKLGGKLSEDDKKTITEAVEKAISWMDKNQDASVEDFKKE 1291
Query: 432 QKELEGICNP 461
+++ + + +P
Sbjct: 1292 KRKWKMLYSP 1301
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 111 bits (267), Expect = 5e-25
Identities = 55/83 (66%), Positives = 65/83 (78%)
Frame = +1
Query: 1 DNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLS 180
DN LLG+F+L GIPPAPRGVPQ+EVTFDIDANGI+NVSA +K T +E +I I G LS
Sbjct: 258 DNKLLGQFQLVGIPPAPRGVPQVEVTFDIDANGIVNVSARDKGTGREQQIVI-QSSGGLS 316
Query: 181 KEEIERMVNEAEKYRNEDDKQKE 249
K+ IE M+ EAEKY E DKQK+
Sbjct: 317 KDAIENMIKEAEKYA-EADKQKK 338
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +3
Query: 210 GREVQKRG*QAKG-DHQAKNALESYCFSMKSTMEDEKLKEKIS-DSDKQTILDKCNDTIK 383
G+E K AK + +AKNALES+ F ++ M E L EK+S +++++TI +
Sbjct: 702 GKEAPKARDDAKAANERAKNALESHIFGVRDEMNSE-LGEKLSTEAERETISEALTAASD 760
Query: 384 WLDSN 398
WLD +
Sbjct: 761 WLDED 765
>SB_40385| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 823
Score = 35.9 bits (79), Expect = 0.032
Identities = 20/76 (26%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Frame = +3
Query: 255 QAKNALESYCFSMKSTMED-EKLKEKISDSDKQTILDKCNDTIKWLDSN-QLADKEEYEH 428
+A+ L++ S K T+ D +K + + D+ + C++ +WL++N A EE
Sbjct: 734 EAQFELKALITSTKETIADPDKHMGRFTKDDRVSGNRYCDEKSEWLENNADTASLEEIVK 793
Query: 429 KQKELEGICNPIITKM 476
++++L G+ PI++K+
Sbjct: 794 QKEDLAGVLQPILSKL 809
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 32.3 bits (70), Expect = 0.39
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +1
Query: 115 AIEKSTNKENKITITNDKGRLSKEEIER--MVNEAEKYRNEDDKQKETIRPR 264
A +K+T+K + ITN G++ KEE +R V E++K K++E IR +
Sbjct: 1132 AEQKATSKLQEEEITNAMGKIEKEEAKRKAAVEESQKAIEAARKKQEEIRQK 1183
>SB_13773| Best HMM Match : TolA (HMM E-Value=0.042)
Length = 1558
Score = 31.9 bits (69), Expect = 0.51
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +3
Query: 213 REVQKRG*QAKGDHQAKNALESYCFSMKSTME-DEKLKEKISDSDKQTILDKCNDTIKWL 389
REVQ+R A DH A AL + ++ + + DE+ E++ ++ Q D ++
Sbjct: 205 REVQRRN-DASMDHAA--ALPADVVAVLTLFDADERAHEELHNTAHQKFTDAIT---RFF 258
Query: 390 DSNQLADKEEYEHKQKELEGICNP 461
D Q A++ +Y ++ +EL+G NP
Sbjct: 259 DKLQ-AEETKYNNRMEELQGALNP 281
>SB_43252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 699
Score = 31.5 bits (68), Expect = 0.68
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +3
Query: 291 MKSTMEDEKLKEKISDSDKQTILDKCNDTIKW-LDSNQLADKEEYEHKQKELEGICNPII 467
+++ + EK K + D +++ L + T+K+ LD +LA KE++ +KE EG +
Sbjct: 100 VENDRDSEKHKRDLRDKEQE--LSELRKTVKYALDQEKLA-KEQFGDLKKEFEGYKKKMD 156
Query: 468 TKM 476
TKM
Sbjct: 157 TKM 159
>SB_20161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 475
Score = 31.5 bits (68), Expect = 0.68
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 7/62 (11%)
Frame = +3
Query: 288 SMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSN------QLADK-EEYEHKQKELE 446
S K ++ +K ++ D +K+ +++C TIK LDSN Q+AD+ EE + ++ELE
Sbjct: 174 SNKLVVDLQKTRKAQDDCEKE--VNRCEATIKTLDSNLKDLRQQVADRDEELNNNRQELE 231
Query: 447 GI 452
+
Sbjct: 232 SV 233
>SB_17273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 58
Score = 31.1 bits (67), Expect = 0.90
Identities = 12/38 (31%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +3
Query: 366 CNDTIKWLDSN-QLADKEEYEHKQKELEGICNPIITKM 476
C++ +WL++N A EE ++++L G+ PI++K+
Sbjct: 7 CDEKSEWLENNADTASLEEIVKQKEDLAGVLQPILSKL 44
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +1
Query: 121 EKSTNKENKITITNDKGRLSKEEIERMVNEAE-KYRNEDDKQK 246
+K+ + NKI + N+ + SKE++ER V AE + R+ D + K
Sbjct: 1031 DKTRRQLNKILVENENLKGSKEDLERRVVVAENRLRDTDSEMK 1073
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/47 (34%), Positives = 30/47 (63%)
Frame = +3
Query: 306 EDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELE 446
E E +KE + +++++ KC +T K LD+++ D+E+ E Q+E E
Sbjct: 1077 EHETMKESLLNANREIGRLKCENTAKNLDADRKEDQED-EEVQREGE 1122
>SB_57319| Best HMM Match : Pox_A_type_inc (HMM E-Value=6.3e-06)
Length = 348
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +1
Query: 64 QIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNE 231
++E+ I+ L A ++ ++T D G + EE++R+ NE EK +NE
Sbjct: 99 EVELRKTIEQKEHLLQMAEKEIVKLREQLTSKADYGNIHAEELQRIRNELEKCKNE 154
>SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 367
Score = 29.9 bits (64), Expect = 2.1
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +3
Query: 75 HLRHRCQRYPKRFRYREVHQQGEQDHHYQRQRSSLQ 182
H +H+ ++ ++ +Y++ HQ Q H Q+Q+ Q
Sbjct: 291 HQQHQLHQHQQQHQYQQQHQHQHQHQHQQQQQQQQQ 326
>SB_15994| Best HMM Match : Pox_A_type_inc (HMM E-Value=2e-06)
Length = 364
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +1
Query: 64 QIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNE 231
++E+ I+ L A ++ ++T D G + EE++R+ NE EK +NE
Sbjct: 99 EVELRKTIEQKEHLLQMAEKEIVKLREQLTSKADYGNIHAEELQRIRNELEKCKNE 154
>SB_49603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1
Query: 118 IEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDK 240
+E+ + K + DKG K ++E EKY E+DK
Sbjct: 66 LEEDKGNKEKYDLEEDKGNKEKYDLEEDKGNKEKYDLEEDK 106
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1
Query: 118 IEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDK 240
+E+ + K + DKG K ++E EKY E+DK
Sbjct: 78 LEEDKGNKEKYDLEEDKGNKEKYDLEEDKGNKEKYDLEEDK 118
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1
Query: 118 IEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDK 240
+E+ + K + DKG K ++E EKY E+DK
Sbjct: 90 LEEDKGNKEKYDLEEDKGNKEKYDLEEDKGNKEKYDLEEDK 130
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1
Query: 118 IEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDK 240
+E+ + K + DKG K ++E EKY E+DK
Sbjct: 102 LEEDKGNKEKYDLEEDKGNKEKYDLEEDKGNKEKYDLEEDK 142
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1
Query: 118 IEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDK 240
+E+ + K + DKG K ++E EKY E+DK
Sbjct: 114 LEEDKGNKEKYDLEEDKGNKEKYDLEEDKGNKEKYDLEEDK 154
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1
Query: 118 IEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDK 240
+E+ + K + DKG K ++E EKY E+DK
Sbjct: 126 LEEDKGNKEKYDLEEDKGNKEKYDLEEDKGNKEKYDLEEDK 166
>SB_54255| Best HMM Match : DUF329 (HMM E-Value=7.8)
Length = 82
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +3
Query: 294 KSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKEL 443
K T ED++ ++K ++SD Q + N T K +L + +E K+ EL
Sbjct: 33 KVTQEDQEPEKKSNESDPQKDQETDNKTSKKESQEELREADETPKKKDEL 82
>SB_3878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 243
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = +1
Query: 109 VSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEK---YRNEDDKQKETIRPR 264
V IEK + K I + KEEIE ++ EK EDD +KE I R
Sbjct: 145 VEEIEKREDANEKEEIEEREDANEKEEIEEREDDNEKEEIEEREDDNEKEEIDER 199
>SB_42043| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 87 RCQRYPKRFRYREVHQQGEQDHHYQRQRSSLQGRD 191
R QRY + + RE HQ+G HH R S + RD
Sbjct: 134 RDQRY-RDYEDRERHQRGRDRHHRDRDDSGCRFRD 167
>SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2193
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +1
Query: 163 DKGRLSKEEIERMVNEAEKYRNEDDKQKE 249
DK +L KEE E+ + E NE KQKE
Sbjct: 1606 DKYQLEKEEAEKRLQSYEDELNEKQKQKE 1634
>SB_3733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1755
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +3
Query: 288 SMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQ 434
S++ ++ E+ EK ++T D+ N TI +L+ EE++HK+
Sbjct: 1684 SVREALDSER--EKWRKEYEKTTQDEINKTISYLEDQYTRGLEEFKHKE 1730
>SB_28298| Best HMM Match : IncA (HMM E-Value=0.32)
Length = 225
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/72 (26%), Positives = 31/72 (43%)
Frame = +1
Query: 10 LLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEE 189
L G L G+ A GV +T + + V A K + ++ GR+S EE
Sbjct: 106 LAGVAGLVGVVGAGAGVVSRGLTSKVAKHEDTMVLAESKKNSTSELVSKALQDGRISDEE 165
Query: 190 IERMVNEAEKYR 225
++ E E+Y+
Sbjct: 166 FRLILQEQERYK 177
>SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17)
Length = 1249
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +1
Query: 163 DKGRLSKEEIERMVNEAEKYRNEDDKQK 246
++ + KEE ER+ EAE+ R ED++Q+
Sbjct: 411 EEEKRQKEEEERLRVEAERQREEDERQR 438
>SB_1333| Best HMM Match : IncA (HMM E-Value=0.32)
Length = 302
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/72 (26%), Positives = 31/72 (43%)
Frame = +1
Query: 10 LLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEE 189
L G L G+ A GV +T + + V A K + ++ GR+S EE
Sbjct: 183 LAGVAGLVGVVGAGAGVVSRGLTSKVAKHEDTMVLAESKKNSTSELVSKALQDGRISDEE 242
Query: 190 IERMVNEAEKYR 225
++ E E+Y+
Sbjct: 243 FRLILQEQERYK 254
>SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1486
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/64 (26%), Positives = 34/64 (53%)
Frame = +3
Query: 249 DHQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEH 428
D + +AL+ Y + ++ EKLKE I D K +LD+ ++W+ + ++ +
Sbjct: 847 DPPSISALDLYVLIPPANIK-EKLKEDIHDPHK--VLDRVKYRVEWVKHQEKEKQKLEDE 903
Query: 429 KQKE 440
++KE
Sbjct: 904 REKE 907
>SB_54258| Best HMM Match : ubiquitin (HMM E-Value=0.00055)
Length = 411
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Frame = +1
Query: 106 NVSAIEKSTNKENKITITNDKGRLSKE-EIERMVN---EAEKYRNEDDKQKET 252
N+ + EK+ +K+ +TN++ SKE ++ N E + +N DD+Q++T
Sbjct: 46 NLDSEEKTEDKQTASDLTNEENAESKEITADQPTNNELETDNAQNVDDQQQQT 98
>SB_7914| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 233
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 306 EDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKE 440
EDE+ E SD D +T +++ +D ++ D+EE HK +E
Sbjct: 118 EDEEKTESESDDDDKTEKYSDDESDVSMDGDESDDEEEGPHKPEE 162
>SB_42254| Best HMM Match : PH (HMM E-Value=5.5e-19)
Length = 996
Score = 27.9 bits (59), Expect = 8.4
Identities = 18/81 (22%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Frame = +3
Query: 210 GREVQKRG*QAKGDHQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCN--DTIK 383
GR+ RG +G + + + E+EK K +++++++ T L K + +
Sbjct: 245 GRKTTGRGEDKRGGAKERRGTPKAEEEARKKAEEEKEKRRLAEAERLTALAKAKEIEEAR 304
Query: 384 WLDSNQLADKEEYEHKQKELE 446
++ EE KQ+E E
Sbjct: 305 RMEEEAKRQAEEELRKQQEKE 325
>SB_15392| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 212
Score = 27.9 bits (59), Expect = 8.4
Identities = 20/110 (18%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Frame = +3
Query: 120 REVHQQGEQD-HHYQRQRSSLQGRDRAYG**GREVQKRG*QAKGDHQAKNALESYCFSMK 296
+EV ++ +Q+ Q+Q + + + +EVQK Q + + Q + E +
Sbjct: 41 QEVQEEQKQEVQEEQKQEVQEEQKQKVQEEQKQEVQKEQKQEEQEEQKQEVQEEQKQEEQ 100
Query: 297 STMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLAD--KEEYEHKQKE 440
+ E+ K+++ + KQ ++ ++ ++ + K+E + +QK+
Sbjct: 101 EEQKQEEQKQEVQEEQKQEEQEEQKQEVQEEQKQEVQEEQKQEVQEEQKQ 150
>SB_4570| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 27.9 bits (59), Expect = 8.4
Identities = 20/75 (26%), Positives = 33/75 (44%)
Frame = +1
Query: 43 PAPRGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKY 222
P G P++ T D+ + I+ + + TN+ R + EIER NEA+
Sbjct: 225 PTLGGNPEVRATIDLSN---VTQDRIQVAEAEARLALTTNEADRERQLEIERRENEADLQ 281
Query: 223 RNEDDKQKETIRPRM 267
D+ + IR R+
Sbjct: 282 HLVGDEGEGEIRVRL 296
>SB_2761| Best HMM Match : zf-TRAF (HMM E-Value=0.26)
Length = 436
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 54 WRASN*GHLRHRCQRYPKRFRYREVHQQGEQDHHYQRQRSSLQ 182
WR N GH++ R Q P +Y+ + + + H QR L+
Sbjct: 246 WRRQNHGHIQSRTQVQPSSQQYKTLPSE-QSSPHKMSQREPLK 287
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,155,416
Number of Sequences: 59808
Number of extensions: 376576
Number of successful extensions: 1890
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1864
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -