Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30076
(672 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 138 4e-33
03_01_0547 + 4093196-4093657,4094267-4095148 138 4e-33
03_01_0544 + 4082528-4082989,4083585-4084466 138 4e-33
03_01_0543 + 4076981-4077442,4078145-4079026 138 4e-33
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 92 4e-19
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 91 6e-19
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 85 5e-17
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 85 5e-17
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 84 1e-16
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 54 8e-08
02_04_0462 + 23131433-23132836 54 1e-07
04_01_0282 - 3764110-3764666,3765117-3765180 31 0.84
01_02_0134 + 11470543-11470608,11471718-11471775,11472025-114722... 31 1.1
05_02_0107 - 6667944-6668214,6668376-6668524,6668654-6668851,666... 29 2.6
07_03_0154 + 14509979-14512033 29 3.4
01_01_0016 - 88825-90411 29 3.4
10_01_0291 + 3010685-3010838,3010954-3011489 29 4.5
10_01_0290 + 2999775-2999928,3000281-3000816 29 4.5
09_04_0194 + 15504780-15506114 29 4.5
07_03_1712 + 28932328-28932502,28932583-28932902,28933405-28933950 29 4.5
05_04_0116 + 18131510-18133192 29 4.5
10_01_0204 + 2199778-2200835,2201212-2201311 28 5.9
08_02_1414 + 26901937-26902597,26903361-26903397,26903733-269037... 28 5.9
08_02_0386 - 16575636-16575698,16575799-16575858,16575947-165762... 28 5.9
03_04_0206 - 18493178-18495310 28 5.9
10_01_0097 - 1171949-1172047,1172520-1172591,1172791-1172949,117... 28 7.8
03_05_0909 + 28692446-28692826 28 7.8
02_01_0772 - 5755371-5756654,5757808-5757834 28 7.8
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 138 bits (334), Expect = 4e-33
Identities = 66/86 (76%), Positives = 76/86 (88%)
Frame = +1
Query: 1 RDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKM 180
RDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKM
Sbjct: 96 RDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKM 155
Query: 181 DSTEPPYSEPRFEEIKKEVSSYIKKL 258
D+T P YS+ R++EI KEVSSY+KK+
Sbjct: 156 DATTPKYSKARYDEIVKEVSSYLKKV 181
Score = 106 bits (254), Expect = 2e-23
Identities = 52/87 (59%), Positives = 62/87 (71%)
Frame = +3
Query: 249 QEIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPP 428
+++GYNP + FVPISG+ GDNM+E ST + W+KG L+EALD I P
Sbjct: 179 KKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALDQINEP 226
Query: 429 ARPTDKPLRLPLQDVYKIGGIGTVPVG 509
RP+DKPLRLPLQDVYKIGGIGTVPVG
Sbjct: 227 KRPSDKPLRLPLQDVYKIGGIGTVPVG 253
Score = 97.5 bits (232), Expect = 9e-21
Identities = 43/54 (79%), Positives = 49/54 (90%)
Frame = +2
Query: 509 RFETGVLKPGTIVVFSPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKE 670
R ETGVLKPG +V F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+VK+
Sbjct: 254 RVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKD 307
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 138 bits (334), Expect = 4e-33
Identities = 66/86 (76%), Positives = 76/86 (88%)
Frame = +1
Query: 1 RDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKM 180
RDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKM
Sbjct: 96 RDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKM 155
Query: 181 DSTEPPYSEPRFEEIKKEVSSYIKKL 258
D+T P YS+ R++EI KEVSSY+KK+
Sbjct: 156 DATTPKYSKARYDEIVKEVSSYLKKV 181
Score = 106 bits (254), Expect = 2e-23
Identities = 52/87 (59%), Positives = 62/87 (71%)
Frame = +3
Query: 249 QEIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPP 428
+++GYNP + FVPISG+ GDNM+E ST + W+KG L+EALD I P
Sbjct: 179 KKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALDQINEP 226
Query: 429 ARPTDKPLRLPLQDVYKIGGIGTVPVG 509
RP+DKPLRLPLQDVYKIGGIGTVPVG
Sbjct: 227 KRPSDKPLRLPLQDVYKIGGIGTVPVG 253
Score = 97.5 bits (232), Expect = 9e-21
Identities = 43/54 (79%), Positives = 49/54 (90%)
Frame = +2
Query: 509 RFETGVLKPGTIVVFSPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKE 670
R ETGVLKPG +V F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+VK+
Sbjct: 254 RVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKD 307
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 138 bits (334), Expect = 4e-33
Identities = 66/86 (76%), Positives = 76/86 (88%)
Frame = +1
Query: 1 RDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKM 180
RDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKM
Sbjct: 96 RDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKM 155
Query: 181 DSTEPPYSEPRFEEIKKEVSSYIKKL 258
D+T P YS+ R++EI KEVSSY+KK+
Sbjct: 156 DATTPKYSKARYDEIVKEVSSYLKKV 181
Score = 106 bits (254), Expect = 2e-23
Identities = 52/87 (59%), Positives = 62/87 (71%)
Frame = +3
Query: 249 QEIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPP 428
+++GYNP + FVPISG+ GDNM+E ST + W+KG L+EALD I P
Sbjct: 179 KKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALDQINEP 226
Query: 429 ARPTDKPLRLPLQDVYKIGGIGTVPVG 509
RP+DKPLRLPLQDVYKIGGIGTVPVG
Sbjct: 227 KRPSDKPLRLPLQDVYKIGGIGTVPVG 253
Score = 97.5 bits (232), Expect = 9e-21
Identities = 43/54 (79%), Positives = 49/54 (90%)
Frame = +2
Query: 509 RFETGVLKPGTIVVFSPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKE 670
R ETGVLKPG +V F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+VK+
Sbjct: 254 RVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKD 307
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 138 bits (334), Expect = 4e-33
Identities = 66/86 (76%), Positives = 76/86 (88%)
Frame = +1
Query: 1 RDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKM 180
RDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKM
Sbjct: 96 RDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKM 155
Query: 181 DSTEPPYSEPRFEEIKKEVSSYIKKL 258
D+T P YS+ R++EI KEVSSY+KK+
Sbjct: 156 DATTPKYSKARYDEIVKEVSSYLKKV 181
Score = 106 bits (254), Expect = 2e-23
Identities = 52/87 (59%), Positives = 62/87 (71%)
Frame = +3
Query: 249 QEIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPP 428
+++GYNP + FVPISG+ GDNM+E ST + W+KG L+EALD I P
Sbjct: 179 KKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALDQINEP 226
Query: 429 ARPTDKPLRLPLQDVYKIGGIGTVPVG 509
RP+DKPLRLPLQDVYKIGGIGTVPVG
Sbjct: 227 KRPSDKPLRLPLQDVYKIGGIGTVPVG 253
Score = 97.5 bits (232), Expect = 9e-21
Identities = 43/54 (79%), Positives = 49/54 (90%)
Frame = +2
Query: 509 RFETGVLKPGTIVVFSPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKE 670
R ETGVLKPG +V F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+VK+
Sbjct: 254 RVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKD 307
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 91.9 bits (218), Expect = 4e-19
Identities = 41/84 (48%), Positives = 60/84 (71%)
Frame = +1
Query: 1 RDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKM 180
+ ++ NMI+G SQAD VL+++A GEFE G K GQTREH LLA TLGV +LIV +NKM
Sbjct: 87 KSYVPNMISGASQADIGVLVISARKGEFETGYEKGGQTREHVLLAKTLGVAKLIVVINKM 146
Query: 181 DSTEPPYSEPRFEEIKKEVSSYIK 252
D +S+ R++EI+ ++ +++
Sbjct: 147 DEPTVKWSKERYDEIESKMVPFLR 170
Score = 44.8 bits (101), Expect = 6e-05
Identities = 34/88 (38%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +3
Query: 258 GYNPAA-VAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPAR 434
GYN V F+PISG G NM K W DG CL E LD I P R
Sbjct: 173 GYNVKKDVHFLPISGLLGSNMKTRMDKS--ICSWW--------DGPCLFEVLDCIEVPLR 222
Query: 435 PTDKPLRLPLQDVYKIGGIGTVPVGDLK 518
P+R+P+ D YK +GTV +G ++
Sbjct: 223 DPKGPVRMPIIDKYK--DMGTVVMGKIE 248
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 91.5 bits (217), Expect = 6e-19
Identities = 40/84 (47%), Positives = 61/84 (72%)
Frame = +1
Query: 1 RDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKM 180
+ ++ NMI+G SQAD VL+++A GEFE G + GQTREH LLA TLGV +L+V +NKM
Sbjct: 42 KSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVLLAKTLGVSKLVVVINKM 101
Query: 181 DSTEPPYSEPRFEEIKKEVSSYIK 252
D + +S+ R++EI+ ++ ++K
Sbjct: 102 DESTVGWSKERYDEIEGKMVPFLK 125
Score = 41.9 bits (94), Expect = 4e-04
Identities = 33/88 (37%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +3
Query: 258 GYNPAA-VAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPAR 434
GYN V F+PISG G NM K W G CL E LD I P R
Sbjct: 128 GYNVKKDVHFLPISGLLGTNMKTRMDKSNC--SWW--------SGPCLFEVLDCIQVPLR 177
Query: 435 PTDKPLRLPLQDVYKIGGIGTVPVGDLK 518
P+R+P+ D YK +GTV +G ++
Sbjct: 178 DPKGPVRMPIIDKYK--DMGTVVMGKIE 203
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/50 (24%), Positives = 24/50 (48%)
Frame = +2
Query: 509 RFETGVLKPGTIVVFSPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNV 658
+ E+G + G ++ P +V SV + ++ A PG+NV + +
Sbjct: 201 KIESGTISEGDNMLVMPNKANVKVISVHCDEDRVRSAAPGENVRVKLSGI 250
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 85.0 bits (201), Expect = 5e-17
Identities = 45/89 (50%), Positives = 62/89 (69%), Gaps = 5/89 (5%)
Frame = +1
Query: 1 RDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN-----GQTREHALLAFTLGVKQLIV 165
+DF+ NMI+G +QAD A+L+V A TG FEAG+ GQT+EHA L + GV+QLIV
Sbjct: 336 KDFVPNMISGATQADAAILVVDACTGSFEAGMDGEGGKSVGQTKEHAQLIRSFGVEQLIV 395
Query: 166 GVNKMDSTEPPYSEPRFEEIKKEVSSYIK 252
VNKMD+ YS+ RFE IK ++ S+++
Sbjct: 396 AVNKMDAI--GYSKERFEFIKVQLGSFLR 422
Score = 38.3 bits (85), Expect = 0.006
Identities = 25/90 (27%), Positives = 45/90 (50%)
Frame = +3
Query: 225 QEGSILIHQEIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIE 404
Q GS L + + ++V ++P+S N+++ + + +Q G CL++
Sbjct: 416 QLGSFL--RSCNFKDSSVTWIPLSAVENQNLIKIPSDVRLTSWYQ---------GFCLLD 464
Query: 405 ALDAILPPARPTDKPLRLPLQDVYKIGGIG 494
A+D++ P+R KPL LP+ DV K G
Sbjct: 465 AIDSLQLPSRDVSKPLILPICDVIKSQSTG 494
Score = 35.5 bits (78), Expect = 0.039
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +2
Query: 494 YRARRRFETGVLKPGTIVVFSPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNV 658
+ A + ETG ++ G+ V+ SP VKS+E + A GDNV +++ +
Sbjct: 496 FAAFGKLETGAIRIGSKVLISPCGEVAAVKSIERDSNSCDIARAGDNVAVSLQGI 550
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 85.0 bits (201), Expect = 5e-17
Identities = 45/89 (50%), Positives = 62/89 (69%), Gaps = 5/89 (5%)
Frame = +1
Query: 1 RDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN-----GQTREHALLAFTLGVKQLIV 165
+DF+ NMI+G +QAD A+L+V A TG FEAG+ GQT+EHA L + GV+QLIV
Sbjct: 336 KDFVPNMISGATQADAAILVVDACTGSFEAGMDGEGGKSVGQTKEHAQLIRSFGVEQLIV 395
Query: 166 GVNKMDSTEPPYSEPRFEEIKKEVSSYIK 252
VNKMD+ YS+ RFE IK ++ S+++
Sbjct: 396 AVNKMDAI--GYSKERFEFIKVQLGSFLR 422
Score = 38.3 bits (85), Expect = 0.006
Identities = 25/90 (27%), Positives = 45/90 (50%)
Frame = +3
Query: 225 QEGSILIHQEIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIE 404
Q GS L + + ++V ++P+S N+++ + + +Q G CL++
Sbjct: 416 QLGSFL--RSCNFKDSSVTWIPLSAVENQNLIKIPSDVRLTSWYQ---------GFCLLD 464
Query: 405 ALDAILPPARPTDKPLRLPLQDVYKIGGIG 494
A+D++ P+R KPL LP+ DV K G
Sbjct: 465 AIDSLQLPSRDVSKPLILPICDVIKSQSTG 494
Score = 35.5 bits (78), Expect = 0.039
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +2
Query: 494 YRARRRFETGVLKPGTIVVFSPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNV 658
+ A + ETG ++ G+ V+ SP VKS+E + A GDNV +++ +
Sbjct: 496 FAAFGKLETGAIRIGSKVLISPCGEVAAVKSIERDSNSCDIARAGDNVAVSLQGI 550
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 83.8 bits (198), Expect = 1e-16
Identities = 41/86 (47%), Positives = 60/86 (69%), Gaps = 2/86 (2%)
Frame = +1
Query: 1 RDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN--GQTREHALLAFTLGVKQLIVGVN 174
+DF+ NMI+G +Q+D A+L++ A G FEAG+ N GQT+EH+ L + GV LIV VN
Sbjct: 323 KDFVPNMISGATQSDAAILVIDASIGSFEAGMGINGIGQTKEHSQLVRSFGVDNLIVVVN 382
Query: 175 KMDSTEPPYSEPRFEEIKKEVSSYIK 252
KMDS E YS+ RF IK ++ ++++
Sbjct: 383 KMDSVE--YSKERFNFIKSQLGAFLR 406
Score = 61.3 bits (142), Expect = 7e-10
Identities = 34/96 (35%), Positives = 53/96 (55%)
Frame = +3
Query: 222 NQEGSILIHQEIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLI 401
+Q G+ L + GY +AVA+VPIS +N++ ++ W DG CL+
Sbjct: 399 SQLGAFL--RSCGYKDSAVAWVPISAMENENLMTTASDTR-LSSWY--------DGNCLL 447
Query: 402 EALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVG 509
+A+D + PP+R KPLRLP+ DV+ +G V +G
Sbjct: 448 KAIDTLPPPSRDVSKPLRLPICDVFSSHKLGQVAIG 483
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 54.4 bits (125), Expect = 8e-08
Identities = 31/83 (37%), Positives = 47/83 (56%)
Frame = +1
Query: 4 DFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 183
D++KNMITG +Q D +L+V+A G QT+EH LLA +GV L+ +NK+D
Sbjct: 142 DYVKNMITGAAQMDGGILVVSAPDGPMP-------QTKEHILLARQVGVPSLVCFLNKVD 194
Query: 184 STEPPYSEPRFEEIKKEVSSYIK 252
+ + P E +E+ S+ K
Sbjct: 195 AVDDPELLELVEMELRELLSFYK 217
Score = 38.3 bits (85), Expect = 0.006
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
Frame = +3
Query: 324 PSTKMPWFKGWQVERKEGKAD--GKC----LIEALDAILP-PARPTDKPLRLPLQDVYKI 482
P ++P +G + +G D GK L++A+D +P P R DK +P++DV+ I
Sbjct: 219 PGDEIPIIRGSALSALQGTNDEIGKNAILKLMDAVDEYIPDPVRQLDKSFLMPIEDVFSI 278
Query: 483 GGIGTVPVG 509
G GTV G
Sbjct: 279 QGRGTVVTG 287
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Frame = +2
Query: 509 RFETGVLKPGT---IVVFSPAN-ITTEVKSVEMHHEALQEAVPGDNVGFNVKNV 658
R E G +K G I+ +P+ + T V VEM + L GDNVG ++ +
Sbjct: 288 RVEQGTIKTGEDVEILGLTPSGPLKTTVTGVEMFKKILDHGEAGDNVGLLLRGL 341
>02_04_0462 + 23131433-23132836
Length = 467
Score = 53.6 bits (123), Expect = 1e-07
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = +1
Query: 4 DFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 183
D++KNMITG +Q D A+L+V+ G QT+EH LLA +GV +++V +NK D
Sbjct: 145 DYVKNMITGAAQMDGAILVVSGADGPMP-------QTKEHILLAKQVGVPKIVVFLNKKD 197
Query: 184 STEPPYSEPRFE-EIKKEVSSY 246
+ E E+++ +SSY
Sbjct: 198 QVDDEELLQLVELEVRELLSSY 219
Score = 37.1 bits (82), Expect = 0.013
Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +3
Query: 396 LIEALDAILP-PARPTDKPLRLPLQDVYKIGGIGTVPVGDLK 518
LI+++D +P P R TD P L ++DV+ I G GTV G ++
Sbjct: 260 LIDSVDNYIPVPQRQTDLPFLLAVEDVFSITGRGTVATGRIE 301
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +2
Query: 500 ARRRFETGVLKPGTIVVFSPANITTE--VKSVEMHHEALQEAVPGDNVGFNVKNV 658
A R E G +K G V T V VEM + + +A+ GDNVG ++ +
Sbjct: 296 ATGRIERGTVKVGDTVDIVGIRETRNCTVTGVEMFQKTMDDAMAGDNVGLLLRGM 350
>04_01_0282 - 3764110-3764666,3765117-3765180
Length = 206
Score = 31.1 bits (67), Expect = 0.84
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -3
Query: 580 DFSSDVGGGKDNNGTWFQHTSFKSPTGTVP--IPPILYTS 467
D + +GGG GTW++H SP ++P PP + +S
Sbjct: 142 DLAVGLGGGGLRGGTWWRHGGVASPPASLPPLAPPSVVSS 181
>01_02_0134 +
11470543-11470608,11471718-11471775,11472025-11472278,
11472307-11472511,11472907-11473142
Length = 272
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Frame = +1
Query: 103 NGQTREHALLAFTLGVKQ----LIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKLAT-T 267
N + +EH L T G LIV ++D P +EP+ +E KK S + + T T
Sbjct: 81 NDKAKEHELPKGTEGPSTSAIVLIVSEKELDVQVVPENEPKVQEPKKSKSHQVWNVETET 140
Query: 268 QLLSLSCPFLDGTETT 315
+ CP + E T
Sbjct: 141 DVYEDPCPAKNDVENT 156
>05_02_0107 -
6667944-6668214,6668376-6668524,6668654-6668851,
6668989-6669250,6669378-6670327,6670907-6671022,
6671121-6671280
Length = 701
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = -3
Query: 568 DVGGGKDNNGTWFQHTS-FKSPTGTVPIPPILYTSCRGRRRGLSVGRAGGRMASRA 404
DV G N F+H S K P+PP+ + S RG G+ G G MA R+
Sbjct: 17 DVDGRGAYNNAKFRHRSRLKVLLPPDPLPPLPFLSPRGDVEGVESGWLEGFMAPRS 72
>07_03_0154 + 14509979-14512033
Length = 684
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = -1
Query: 321 PTCCLRAIQKWARKRQQLGCSQFLDV*GYFLLDFLKSGLTVWWFSGIHFVYSYDELFDTE 142
P+C R QK R R ++ S+ G LD +K+G + FSGI + E+
Sbjct: 517 PSCPNRVSQKGLRNRLEVFRSRETGW-GVRSLDLIKAGTFICEFSGIVLTHQQSEIMAAN 575
Query: 141 GE 136
G+
Sbjct: 576 GD 577
>01_01_0016 - 88825-90411
Length = 528
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1
Query: 165 YDELFDTEGESEQGMLTGLTVLRDTSFEFTGTGSYDEHSA 46
YD F + +G+L L+V+ F+ TGT + D+H A
Sbjct: 241 YDAAF--RDHARRGLLPALSVIEPRYFDLTGTPADDDHPA 278
>10_01_0291 + 3010685-3010838,3010954-3011489
Length = 229
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = -3
Query: 466 CRGRRRGLSVGRAGGRMASRASMRHFPSALPSLRSTCHPLNQGILVEGSNMLSPCHPE 293
C G+ V + G + A H+PSAL + + C P+ + I+ P PE
Sbjct: 105 CPGQEPSKIVPMSEGTFIAVAGQTHYPSALCASATICGPIKKKIIDHFHKKPVPPKPE 162
>10_01_0290 + 2999775-2999928,3000281-3000816
Length = 229
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = -3
Query: 466 CRGRRRGLSVGRAGGRMASRASMRHFPSALPSLRSTCHPLNQGILVEGSNMLSPCHPE 293
C G+ V + G + A H+PSAL + + C P+ + I+ P PE
Sbjct: 105 CPGQEPSKIVPMSEGTFVAIAGKTHYPSALCASATICGPIKKKIIDHFHKKPVPPKPE 162
>09_04_0194 + 15504780-15506114
Length = 444
Score = 28.7 bits (61), Expect = 4.5
Identities = 23/79 (29%), Positives = 31/79 (39%)
Frame = -3
Query: 502 GTVPIPPILYTSCRGRRRGLSVGRAGGRMASRASMRHFPSALPSLRSTCHPLNQGILVEG 323
G+ P P L +C G +V + GR + P+ PS P+ QG L
Sbjct: 122 GSPPSPACLNRTCTGHAEN-TVTSSVGRGNVVTDVLSLPTTFPSA-----PVRQGPLATA 175
Query: 322 SNMLSPCHPEMGTKATAAG 266
L C P T+ AAG
Sbjct: 176 PAFLFTCGPTSLTQGLAAG 194
>07_03_1712 + 28932328-28932502,28932583-28932902,28933405-28933950
Length = 346
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -3
Query: 355 HPLNQGILVEGSNMLSPCHPEMGTKATAAG 266
HP +L G N L+ C+P + AT AG
Sbjct: 258 HPSLNQLLGVGDNFLAECYPSTASTATVAG 287
>05_04_0116 + 18131510-18133192
Length = 560
Score = 28.7 bits (61), Expect = 4.5
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = -2
Query: 221 SSNLGSLYGGSVE-SILFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPA---ATMS 54
+S G GGS+ S+ P S T V S P + PA+ +P PA ATM+
Sbjct: 66 ASGSGEGQGGSMSLSLQLRPLGSTPTAAVAVSVPPMAAAPMMAGPAAAAPAPAPPLATMA 125
Query: 53 TAQSA 39
AQ+A
Sbjct: 126 VAQNA 130
>10_01_0204 + 2199778-2200835,2201212-2201311
Length = 385
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = -3
Query: 469 SCRGRRRGLSVGRAGGRMASRASMRHFPSALPSLRSTCHP 350
S R RRR ++ RAG R+ SRA +R PS S+ HP
Sbjct: 220 SARRRRRQSAIARAGARV-SRAGVR--PSPASSILVGVHP 256
>08_02_1414 +
26901937-26902597,26903361-26903397,26903733-26903791,
26904198-26904388,26904591-26904680,26904833-26904926,
26905008-26905159,26905250-26905347,26905400-26905459,
26905460-26905598,26905686-26905784,26905883-26906018,
26906352-26906413
Length = 625
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +2
Query: 533 PGTIVVFSPANITTEVKSVEMHHEALQEAVPGDNVG 640
P TIV SP T KSVE +E L A G ++G
Sbjct: 262 PSTIVGPSPVAGITVDKSVEFSYEELSNATQGFSIG 297
>08_02_0386 -
16575636-16575698,16575799-16575858,16575947-16576239,
16576361-16576517,16576601-16576948,16577047-16577177,
16577417-16577882,16578425-16579132
Length = 741
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -1
Query: 231 LLDFLKSGLTVWWFSGIHFVY 169
+L+ GL VW GIHFVY
Sbjct: 234 ILEIKTGGLVVWTRGGIHFVY 254
>03_04_0206 - 18493178-18495310
Length = 710
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +1
Query: 169 VNKMDSTEPPYSEPRFEEIKKEV 237
VNK D T Y + EEIKKEV
Sbjct: 686 VNKFDGTFEDYKDELLEEIKKEV 708
>10_01_0097 -
1171949-1172047,1172520-1172591,1172791-1172949,
1172998-1173381,1173478-1175253,1175329-1175452,
1176859-1177027,1177131-1177226,1177339-1177527,
1177965-1179303
Length = 1468
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 388 ENASLKLSMPSCHLPAPLTSPCVFPCKTYTKS 483
E A++ +S P LP P P +FP + T+S
Sbjct: 21 EEAAVVVSQPQKTLPVPTAGPSLFPQQEVTQS 52
>03_05_0909 + 28692446-28692826
Length = 126
Score = 27.9 bits (59), Expect = 7.8
Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = -1
Query: 585 DLTSVVMLAG-EKTTMVPGFNTPVSNLRRARYQYHRFCIRLAGEDAGACQWGG 430
+L + AG E P TP + L R+ RF + AGEDA G
Sbjct: 56 ELVDAGIAAGREADAAAPPATTPAAILGETRHSARRFLVVAAGEDAATDDGAG 108
>02_01_0772 - 5755371-5756654,5757808-5757834
Length = 436
Score = 27.9 bits (59), Expect = 7.8
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -3
Query: 487 PPILYTSCRGRRRGLSVGRAGGRMASRASMRHFPSALPSLRSTCHPL 347
PP+ ++C R G A R+ RA A PSLR++ HPL
Sbjct: 8 PPVDSSACLCRVERSVAGAAAARLMPRAKA----CAQPSLRASIHPL 50
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,555,184
Number of Sequences: 37544
Number of extensions: 521935
Number of successful extensions: 1900
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1886
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1703141568
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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