Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30075
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL...   126   6e-31
EF492429-1|ABP35929.1|  155|Anopheles gambiae lysozyme i-2 protein.    27   0.62 

>Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL10
           protein.
          Length = 204

 Score =  126 bits (305), Expect = 6e-31
 Identities = 57/85 (67%), Positives = 65/85 (76%)
 Frame = +3

Query: 255 VAKGATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVIL 434
           V KG TYGKPKSHGVNQLKP R LQS+AEE            +SYWVAQD+++KYFEVI+
Sbjct: 75  VHKGCTYGKPKSHGVNQLKPYRCLQSVAEERVGGRLGGLRVLNSYWVAQDAAHKYFEVIM 134

Query: 435 VDPSHKAIRRDPKINWIVNAVHKHR 509
           VDP + AIRRDP +NWI NAVHKHR
Sbjct: 135 VDPPNNAIRRDPNVNWICNAVHKHR 159



 Score =  110 bits (264), Expect = 5e-26
 Identities = 47/62 (75%), Positives = 54/62 (87%)
 Frame = +1

Query: 34  MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGYV 213
           MGAYRY+QELYRKK SDVMR+LLRVR WQYRQ+TR HRAPRP RP + RRLGY+AK G+ 
Sbjct: 1   MGAYRYVQELYRKKQSDVMRYLLRVRAWQYRQMTRFHRAPRPWRPTRLRRLGYKAKTGFS 60

Query: 214 VF 219
           +F
Sbjct: 61  IF 62



 Score = 72.9 bits (171), Expect = 1e-14
 Identities = 35/45 (77%), Positives = 39/45 (86%)
 Frame = +2

Query: 509 EMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 643
           E+RGLTSAG+SSRGLGK +RYSQT GGSRRAA +RRN L LRR R
Sbjct: 160 ELRGLTSAGKSSRGLGKAYRYSQTIGGSRRAAGVRRNRLHLRRYR 204


>EF492429-1|ABP35929.1|  155|Anopheles gambiae lysozyme i-2 protein.
          Length = 155

 Score = 27.1 bits (57), Expect = 0.62
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -3

Query: 577 LRVSMSLAETSGAATSRSQTTHLRCLCTAFT 485
           L + +SLA  +GA  S    T  RC+C A T
Sbjct: 8   LLLLLSLATVNGAFLSNLNATCFRCICDAST 38


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 791,791
Number of Sequences: 2352
Number of extensions: 15237
Number of successful extensions: 41
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)