Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30074
(730 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 24 1.1
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 24 1.1
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 24 1.1
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 24 1.1
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 24 1.1
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 24 1.1
AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax pr... 24 1.1
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 24 1.1
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 24 1.1
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 24 1.4
DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired pr... 23 2.5
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 23 3.3
AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface pro... 22 4.4
AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory recept... 22 5.8
AM292371-1|CAL23183.2| 350|Tribolium castaneum gustatory recept... 21 7.7
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 24.2 bits (50), Expect = 1.1
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +1
Query: 409 LTNTYRFSRFILRKRNVYIYYLLYMIER 492
L + F+R++ R+R + I + L + ER
Sbjct: 235 LEKEFHFNRYLTRRRRIEIAHALCLTER 262
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 24.2 bits (50), Expect = 1.1
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +1
Query: 409 LTNTYRFSRFILRKRNVYIYYLLYMIER 492
L + F+R++ R+R + I + L + ER
Sbjct: 235 LEKEFHFNRYLTRRRRIEIAHALCLTER 262
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 24.2 bits (50), Expect = 1.1
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +1
Query: 409 LTNTYRFSRFILRKRNVYIYYLLYMIER 492
L + F+R++ R+R + I + L + ER
Sbjct: 257 LEKEFHFNRYLTRRRRIEIAHALCLTER 284
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 24.2 bits (50), Expect = 1.1
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +1
Query: 409 LTNTYRFSRFILRKRNVYIYYLLYMIER 492
L + F+R++ R+R + I + L + ER
Sbjct: 235 LEKEFHFNRYLTRRRRIEIAHALCLTER 262
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 24.2 bits (50), Expect = 1.1
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +1
Query: 409 LTNTYRFSRFILRKRNVYIYYLLYMIER 492
L + F+R++ R+R + I + L + ER
Sbjct: 191 LEKEFHFNRYLTRRRRIEIAHALCLTER 218
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 24.2 bits (50), Expect = 1.1
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +1
Query: 409 LTNTYRFSRFILRKRNVYIYYLLYMIER 492
L + F+R++ R+R + I + L + ER
Sbjct: 235 LEKEFHFNRYLTRRRRIEIAHALCLTER 262
>AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax
protein.
Length = 100
Score = 24.2 bits (50), Expect = 1.1
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +1
Query: 409 LTNTYRFSRFILRKRNVYIYYLLYMIER 492
L + F+R++ R+R + I + L + ER
Sbjct: 23 LEKEFHFNRYLTRRRRIEIAHALCLTER 50
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 24.2 bits (50), Expect = 1.1
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +1
Query: 409 LTNTYRFSRFILRKRNVYIYYLLYMIER 492
L + F+R++ R+R + I + L + ER
Sbjct: 259 LEKEFHFNRYLTRRRRIEIAHALCLTER 286
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 24.2 bits (50), Expect = 1.1
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +1
Query: 409 LTNTYRFSRFILRKRNVYIYYLLYMIER 492
L + F+R++ R+R + I + L + ER
Sbjct: 235 LEKEFHFNRYLTRRRRIEIAHALCLTER 262
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 23.8 bits (49), Expect = 1.4
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +1
Query: 409 LTNTYRFSRFILRKRNVYIYYLLYMIERNNV 501
L + F+R++ R+R + I + L + +N V
Sbjct: 235 LEKEFHFNRYLTRRRRIEIAHALCLTNKNLV 265
>DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired
protein.
Length = 311
Score = 23.0 bits (47), Expect = 2.5
Identities = 7/25 (28%), Positives = 15/25 (60%)
Frame = +1
Query: 199 FNSSRNVHQNTVHENVSLNKMLINI 273
+ ++ QN++ N+SLNK + +
Sbjct: 120 YRENKQGWQNSIRHNLSLNKCFVKV 144
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 22.6 bits (46), Expect = 3.3
Identities = 30/130 (23%), Positives = 51/130 (39%)
Frame = -2
Query: 615 TISLYNLESL*NKRYDAGLHY*YLRNLIN*VHNYFVALHIISFNHV*QIVYIYISFSQNE 436
T+S +L SL NKR A L L +L+ +N + + + +++ S
Sbjct: 20 TVSNVSLHSLKNKRSGASLQVGILDSLVFKCYNLRRIYYFYCVSITFNVHLLFLLCSGYF 79
Query: 435 PRKPVCISQDIIFFKWSHLKIYN*FIFLRGYITFLVIIVYFHCIIICTVPRTSFNVY*HF 256
+ IIF H + + F +I L + +++ II TV +F
Sbjct: 80 TVHLLFYCPFIIF--TVHFLLCT-YYFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYF 136
Query: 255 VK*YVFMNCI 226
V F+ CI
Sbjct: 137 VVPLFFLLCI 146
Score = 21.8 bits (44), Expect = 5.8
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = -2
Query: 402 IFFKWSHLKIYN*FIFLRGYITFLVIIVYFHCIII 298
+FF Y FI ++ FL+ I +F C I
Sbjct: 140 LFFLLCIYYFYCAFIIFTVHLLFLLCIYHFFCAFI 174
>AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface
protein chaoptin protein.
Length = 782
Score = 22.2 bits (45), Expect = 4.4
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 199 FNSSRNVHQNTVHENVSLNKM 261
FNS RNV Q+T + + L ++
Sbjct: 101 FNSVRNVQQHTFADLIQLEQI 121
>AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory receptor
candidate 48 protein.
Length = 408
Score = 21.8 bits (44), Expect = 5.8
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +2
Query: 179 HFYCIKCLIQVEMFI 223
HF+ +KC IQ E +
Sbjct: 347 HFFSVKCSIQSESLL 361
>AM292371-1|CAL23183.2| 350|Tribolium castaneum gustatory receptor
candidate 50 protein.
Length = 350
Score = 21.4 bits (43), Expect = 7.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -1
Query: 367 LIHFFKGVHNLLSNYCLLSLHNNMY 293
L+ GVHN L N C ++ N++Y
Sbjct: 210 LLDIVHGVHNELCNLCQVA--NSIY 232
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,745
Number of Sequences: 336
Number of extensions: 3777
Number of successful extensions: 19
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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